| Tag |
Content |
| WERAM ID |
WERAM-Orgl-0006 |
| Ensembl Protein ID |
OGLUM01G24610.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.20e-122 |
409.7 |
22 |
348 |
|
| Organism |
Oryza glumaepatula |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae......elskelkkfnv 88
++v+y+yd+ ++++ yg++h+m+p+r++++h+Lv +yg+ +++++++ a+a+el+ fh e y+ +l+ +p++ ++++ ++v
OGLUM01G24610.1 22 RRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMRRLRTAPATAAELADFHDEGYLALLQDLTPDDCGgddgigDMARARGIYAV 115
589***********************************************************************98777788866677777888 PP
class-1.txt 89 ge.......dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
+ d Pvfd l++yc ++G+sl+aa+ L +++ad+ainw+GG+hha + a GfcyvnDivlai ell +++rvly+did+hhGDgv
OGLUM01G24610.1 116 EGkgggrgvDNPVFDRLWDYCLRYSGGSLAAARALGSGTADVAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGV 209
6444455559************************************************************************************ PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvga.ekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
e af++++rvmtvsfh++g +ffP +G + dvg+ + g+y a+nvP++ gi De+y+++f++++ +v+e+f+PeavvlqcGaDslagDrlge n
OGLUM01G24610.1 210 EAAFEASNRVMTVSFHQHGGGFFPCSGAVADVGKkGPGQYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELN 303
********************************972689******************************************************** PP
class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
l+++gha+cv+f++sfnlpll+lGGGGYt++ va cw+ etav++
OGLUM01G24610.1 304 LTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAI 348
******************************************975 PP
|
Protein Sequence
(Fasta) | MAMAGGGGNS LPSPSCGDDK KRRVCYYYDP GISTVDYGEG HVMVPHRVTM AHNLVAAYGM 60
LGDMRRLRTA PATAAELADF HDEGYLALLQ DLTPDDCGGD DGIGDMARAR GIYAVEGKGG 120
GRGVDNPVFD RLWDYCLRYS GGSLAAARAL GSGTADVAIN WSGGMHHACR GGARGFCYVN 180
DIVLAIRELL AHFRRVLYVD IDVHHGDGVE AAFEASNRVM TVSFHQHGGG FFPCSGAVAD 240
VGKKGPGQYC ALNVPVSVGI GDEEYHRLFE PIMARVMEVF QPEAVVLQCG ADSLAGDRLG 300
ELNLTTRGHA QCVSFIRSFN LPLLLLGGGG YTINHVASCW CNETAVAIGK EIPNDIPKHG 360
FDVFYKNQEY KLHYKLETKH LHRNRNTANS IDGIRMAAME NLSKLKLEAA ASVQFEERRH 420
RSIDVGDLYY DPREQEEEEE SPTARLHRKL YFEPTGDQES PYTKHRCNVQ PGESSSRKQR 480
KLK 483Protein Fasta Sequence
>OGLUM01G24610.1|Class-I|Oryza glumaepatula
MAMAGGGGNSLPSPSCGDDKKRRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMRRLRTAPATAAELADFHDEGYLALLQDLTPDDCGGDDGIGDMARARGIYAVEGKGGGRGVDNPVFDRLWDYCLRYSGGSLAAARALGSGTADVAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGVEAAFEASNRVMTVSFHQHGGGFFPCSGAVADVGKKGPGQYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELNLTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNETAVAIGKEIPNDIPKHGFDVFYKNQEYKLHYKLETKHLHRNRNTANSIDGIRMAAMENLSKLKLEAAASVQFEERRHRSIDVGDLYYDPREQEEEEESPTARLHRKLYFEPTGDQESPYTKHRCNVQPGESSSRKQRKLK |
Nucleotide Sequence
(Fasta) | ATGGCCATGG CCGGCGGCGG CGGCAATTCG CTGCCTTCGC CGTCGTGCGG CGACGACAAG 60
AAGCGGCGGG TGTGCTACTA CTACGACCCG GGGATCTCCA CCGTCGACTA CGGCGAGGGC 120
CACGTCATGG TGCCGCACCG CGTCACCATG GCGCACAACC TCGTCGCCGC CTACGGCATG 180
CTCGGCGACA TGCGCCGCCT CCGCACGGCG CCCGCCACGG CGGCGGAGCT CGCCGACTTC 240
CACGACGAGG GCTACCTCGC CCTCCTCCAG GACCTCACCC CGGACGACTG CGGAGGCGAC 300
GACGGGATCG GCGACATGGC GCGCGCCAGG GGCATCTACG CCGTCGAGGG CAAGGGCGGC 360
GGCCGCGGCG TCGACAACCC GGTGTTCGAC CGCCTCTGGG ACTACTGCCT CCGCTACTCC 420
GGCGGGTCGC TCGCCGCGGC GCGCGCCCTC GGGAGCGGCA CCGCCGACGT CGCCATCAAC 480
TGGTCGGGCG GGATGCACCA CGCGTGCCGC GGCGGCGCGA GGGGCTTCTG CTACGTGAAC 540
GACATCGTGC TCGCCATCCG CGAGCTCCTC GCCCACTTCC GCCGCGTGCT CTACGTGGAC 600
ATCGACGTCC ACCACGGCGA CGGCGTCGAG GCCGCCTTCG AGGCGTCGAA CCGGGTGATG 660
ACGGTGTCGT TCCACCAGCA CGGCGGCGGC TTCTTCCCGT GCTCCGGCGC CGTCGCCGAC 720
GTCGGCAAGA AGGGCCCCGG CCAGTACTGC GCGCTGAACG TGCCGGTGAG CGTGGGCATC 780
GGCGACGAGG AGTACCACCG GCTGTTCGAG CCGATCATGG CGAGGGTGAT GGAGGTGTTC 840
CAGCCGGAGG CCGTCGTGCT GCAGTGCGGC GCCGACTCCC TCGCCGGCGA CCGGCTCGGC 900
GAGCTGAACC TGACCACGCG CGGCCACGCC CAGTGCGTCA GCTTCATCCG CAGCTTCAAC 960
CTGCCGCTCC TCCTCCTCGG CGGCGGCGGC TACACCATCA ACCACGTCGC CTCCTGCTGG 1020
TGCAATGAGA CGGCGGTGGC CATCGGCAAG GAGATTCCCA ACGACATACC CAAGCATGGT 1080
TTCGACGTGT TCTACAAGAA CCAGGAGTAC AAGCTCCATT ACAAGTTGGA GACGAAGCAC 1140
CTGCACCGCA ACCGCAACAC GGCGAACTCC ATAGACGGCA TCAGGATGGC GGCCATGGAG 1200
AACCTCTCCA AACTGAAGCT GGAGGCGGCG GCGAGCGTGC AGTTCGAGGA GCGCCGCCAC 1260
CGGAGCATCG ACGTCGGCGA CCTCTACTAC GACCCACGCG AGCAGGAAGA GGAAGAGGAG 1320
AGCCCCACGG CGAGGCTGCA CCGGAAGCTC TACTTCGAGC CCACCGGAGA TCAGGAGAGC 1380
CCCTACACTA AGCACAGGTG CAACGTGCAG CCAGGGGAGT CGAGTAGTAG AAAGCAGCGT 1440
AAGCTAAAGT GA
1453Nucleotide Fasta Sequence
>OGLUM01G24610.1|Class-I|Oryza glumaepatula
ATGGCCATGGCCGGCGGCGGCGGCAATTCGCTGCCTTCGCCGTCGTGCGGCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCGGGGATCTCCACCGTCGACTACGGCGAGGGCCACGTCATGGTGCCGCACCGCGTCACCATGGCGCACAACCTCGTCGCCGCCTACGGCATGCTCGGCGACATGCGCCGCCTCCGCACGGCGCCCGCCACGGCGGCGGAGCTCGCCGACTTCCACGACGAGGGCTACCTCGCCCTCCTCCAGGACCTCACCCCGGACGACTGCGGAGGCGACGACGGGATCGGCGACATGGCGCGCGCCAGGGGCATCTACGCCGTCGAGGGCAAGGGCGGCGGCCGCGGCGTCGACAACCCGGTGTTCGACCGCCTCTGGGACTACTGCCTCCGCTACTCCGGCGGGTCGCTCGCCGCGGCGCGCGCCCTCGGGAGCGGCACCGCCGACGTCGCCATCAACTGGTCGGGCGGGATGCACCACGCGTGCCGCGGCGGCGCGAGGGGCTTCTGCTACGTGAACGACATCGTGCTCGCCATCCGCGAGCTCCTCGCCCACTTCCGCCGCGTGCTCTACGTGGACATCGACGTCCACCACGGCGACGGCGTCGAGGCCGCCTTCGAGGCGTCGAACCGGGTGATGACGGTGTCGTTCCACCAGCACGGCGGCGGCTTCTTCCCGTGCTCCGGCGCCGTCGCCGACGTCGGCAAGAAGGGCCCCGGCCAGTACTGCGCGCTGAACGTGCCGGTGAGCGTGGGCATCGGCGACGAGGAGTACCACCGGCTGTTCGAGCCGATCATGGCGAGGGTGATGGAGGTGTTCCAGCCGGAGGCCGTCGTGCTGCAGTGCGGCGCCGACTCCCTCGCCGGCGACCGGCTCGGCGAGCTGAACCTGACCACGCGCGGCCACGCCCAGTGCGTCAGCTTCATCCGCAGCTTCAACCTGCCGCTCCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCTGCTGGTGCAATGAGACGGCGGTGGCCATCGGCAAGGAGATTCCCAACGACATACCCAAGCATGGTTTCGACGTGTTCTACAAGAACCAGGAGTACAAGCTCCATTACAAGTTGGAGACGAAGCACCTGCACCGCAACCGCAACACGGCGAACTCCATAGACGGCATCAGGATGGCGGCCATGGAGAACCTCTCCAAACTGAAGCTGGAGGCGGCGGCGAGCGTGCAGTTCGAGGAGCGCCGCCACCGGAGCATCGACGTCGGCGACCTCTACTACGACCCACGCGAGCAGGAAGAGGAAGAGGAGAGCCCCACGGCGAGGCTGCACCGGAAGCTCTACTTCGAGCCCACCGGAGATCAGGAGAGCCCCTACACTAAGCACAGGTGCAACGTGCAGCCAGGGGAGTCGAGTAGTAGAAAGCAGCGTAAGCTAAAGTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
