WERAM Information

Tag Content
WERAM ID WERAM-Glm-0012
Ensembl Protein ID GLYMA01G45660.3
Gene Name GLYMA_01G245100
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA01G45660 GLYMA01G45660.3 GLYMA01G45660.3
GLYMA01G45660 GLYMA01G45660.4 GLYMA01G45660.4
GLYMA01G45660 GLYMA01G45660.5 GLYMA01G45660.5
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.50e-164 548.2 17 328
Organism Glycine max
Domain Profile
  HDAC Class-I
      class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94 
                      +kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl ++++++kp  a+ ++l+kfh+++y+ fl+ ++pe++++  ++lk+fnvgedcPv
  GLYMA01G45660.3  17 RKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPMAAKDRDLCKFHADDYVAFLRGITPETQQDQLRQLKRFNVGEDCPV 110
                      589******************************************************************************************* PP
      class-1.txt  95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtv 188
                      fdgl+++cq+++G+s+ +a kLn++ +diainwaGGlhhakk+easGfcyvnDivlailellk h+rvly+did+hhGDgveeafyttdrvmtv
  GLYMA01G45660.3 111 FDGLYSFCQTYAGGSVGGALKLNHGVCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKIHERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
                      ********************************************************************************************** PP
      class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
                      sfhk+g+ +fPgtGd++d+g  kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsikghaecv++++
  GLYMA01G45660.3 205 SFHKFGD-YFPGTGDIRDIGYAKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMR 297
                      *******.************************************************************************************** PP
      class-1.txt 283 sfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                      sfn+pll+lGGGGYt+rnvaRcw++et+v+l
  GLYMA01G45660.3 298 SFNVPLLLLGGGGYTIRNVARCWCFETSVAL 328
                      ****************************986 PP
Protein Sequence
(Fasta)		MESGGNSLPS GSDGVKRKVS YFYDPEVGNY YYGQGHPMKP HRIRMTHALL AHYGLLQHMQ 60
VLKPMAAKDR DLCKFHADDY VAFLRGITPE TQQDQLRQLK RFNVGEDCPV FDGLYSFCQT 120
YAGGSVGGAL KLNHGVCDIA INWAGGLHHA KKCEASGFCY VNDIVLAILE LLKIHERVLY 180
VDIDIHHGDG VEEAFYTTDR VMTVSFHKFG DYFPGTGDIR DIGYAKGKYY SLNVPLDDGI 240
DDESYQSLFK PIMGKVMEIF RPGAVVLQCG ADSLSGDRLG CFNLSIKGHA ECVRYMRSFN 300
VPLLLLGGGG YTIRNVARCW CFETSVALGI ELDDKMPQHE YYEYFGPDYT LHVAPSNMEN 360
KNSRQLLDEI RAKLLDNLSR LQHAPSVPFQ ERPPDAELLE RDEDQDDRDE RWDPDSDREV 420
GDDSNPVRRR VKSECVDAED KDTESYHKHL DCGRDYLTPF KEISCSKVSG VYSMAVDEPC 480
IKEEQDNLKE LSDHRPR 497
Nucleotide Sequence
(Fasta)		CTGTAAATAA ATATAGGAGA CTCCGAATTT ACTCCGCTTC AAATCCTCTC CTCTATAGTC 60
TACTGCACTC TGACACTATC AGATATCAAT TTCAGAGGCG GAGCCTGGAG GCTGGAGCTG 120
CTTCAAGTCT TCAACTATCT GAATTTCTGA ACTCATCCAT TCGTTAGCGC AGCTAGAACG 180
AAAGTGAGAT TTCTCCCTGC CAACTCACTC TCTGTCTTGG TTTTTTCTCC GATCTACATT 240
TCTCTTGGTT TTTCTCTGAG ACTATGGAGA CCAGTGATTA CTTTTTCTCT GGTTACCAAG 300
TCATTATATT TGAAACCGGC TAGTCTTTTG AAACATTCAG TGTTTTCTCT TCTGTCTTTG 360
TTTTCATTTT GCAGTTTAGT TTCGGGTTGA ATGGCATTTA GCCCTTTTCA GATCTTATTT 420
CCTTTCTTCT TCCTAGATAT CCGGATGCTA AAAAGTGAAA ACTTCATTCT CTGTTTTTTT 480
TTTTTTAATA TTTTCTCCGT GTTTAGCTCA CAATAGGGGT CTGAACTCTT GAGCATCCTT 540
TTGGAATTTC GTAGTTGAGT ATATATTGTG GTAGTTCAAT TTGCAGTAAG ATACAACGAT 600
GATGTACATA TTTGGGAATT GCTCCAATTT AAATCATCAT TTAACCTTGG CAACCAAACA 660
TGTTTGTCTA ATTTGTCTGC CCAGTTTTGA GCTGAGGTTT GAGGGTTGTA GATGAAGGCT 720
CAATTTGTAA TTATAAAGGC TAGTTAATTT GTATTTATTC CTTCTGGTGT TCGGCAATCA 780
AGAAAACAAT TTGTTGGCCA CTTTGTTTAT TATGGATCAG TGCATGATCT CTGCATTTCC 840
TTATGATCTT AGATTGTTAA ATACTCAATG CTTGTGCTTG ATAATTACTG AATTTTTTCC 900
TTGTCTACAC TATTATTATG CTTCTTGATT AACATTATTT GTGGTAATTT ATAGACTGAG 960
TAATGGAAAG TGGAGGGAAC TCCCTTCCAT CAGGGTCAGA TGGTGTGAAG AGAAAGGTTT 1020
CATATTTCTA TGATCCAGAG GTTGGAAACT ATTATTATGG GCAGGGACAC CCAATGAAAC 1080
CACACAGGAT TCGAATGACA CATGCTCTTT TAGCCCACTA TGGATTGCTT CAACACATGC 1140
AGGTTCTGAA GCCTATGGCT GCTAAAGATA GGGACCTTTG CAAGTTCCAT GCTGATGATT 1200
ATGTGGCCTT TCTGAGAGGC ATCACCCCTG AAACGCAGCA AGATCAATTG AGACAGCTGA 1260
AGAGGTTTAA TGTTGGCGAA GACTGCCCTG TATTTGATGG TCTTTACTCT TTCTGCCAGA 1320
CATATGCAGG AGGTTCTGTT GGTGGTGCTC TAAAGTTGAA CCATGGAGTA TGTGATATTG 1380
CAATAAATTG GGCTGGTGGT CTACATCATG CAAAGAAGTG TGAGGCTTCT GGGTTTTGCT 1440
ATGTTAATGA CATTGTGCTG GCTATTTTGG AACTTCTCAA AATACATGAG CGTGTTCTGT 1500
ATGTGGACAT TGATATCCAC CATGGTGATG GTGTAGAGGA GGCCTTTTAC ACCACCGATA 1560
GGGTCATGAC TGTTTCGTTT CATAAGTTTG GGGATTACTT TCCTGGAACA GGTGATATTC 1620
GTGATATTGG ATATGCTAAA GGGAAATATT ATTCACTAAA TGTTCCCTTG GATGATGGAA 1680
TTGATGATGA GAGCTATCAG TCCTTGTTTA AGCCAATAAT GGGAAAGGTT ATGGAGATTT 1740
TTAGGCCCGG TGCTGTTGTA TTACAATGTG GTGCTGACTC TTTATCTGGG GACAGGTTAG 1800
GTTGTTTCAA TCTTTCCATA AAAGGTCATG CAGAGTGTGT CAGATATATG AGATCTTTTA 1860
ATGTTCCCCT TCTATTGCTC GGGGGAGGTG GCTATACAAT AAGAAATGTG GCACGTTGTT 1920
GGTGTTTCGA GACTAGCGTT GCTCTTGGGA TTGAACTAGA TGATAAGATG CCTCAACATG 1980
AATATTATGA ATATTTTGGT CCTGACTATA CTCTTCATGT TGCTCCAAGT AACATGGAAA 2040
ACAAGAACTC CCGACAATTA TTGGATGAAA TAAGAGCAAA ACTTCTTGAT AATTTATCTA 2100
GGCTTCAACA TGCACCAAGT GTCCCATTCC AGGAACGGCC ACCTGATGCA GAGCTTCTAG 2160
AGAGAGATGA AGATCAAGAT GATAGAGATG AAAGATGGGA TCCCGATTCT GACAGGGAGG 2220
TTGGCGATGA CAGCAATCCT GTTCGCAGAA GGGTGAAAAG TGAATGCGTT GATGCTGAGG 2280
ATAAAGATAC AGAAAGTTAT CATAAACATC TAGATTGTGG AAGAGATTAT CTTACGCCTT 2340
TCAAGGAGAT TTCATGCTCC AAGGTGTCGG GGGTGTACTC AATGGCAGTG GATGAACCAT 2400
GCATCAAAGA GGAGCAGGAT AATTTAAAAG AGCTTTCTGA TCACAGGCCA AGATGAAGCA 2460
ATAATAAGCA TTACTGATCA ACCTTCTCCT TGACTAGTGT CTGTCGACCT GTAAATTATA 2520
GTTTCCTCCT AAAGCAGTCT GGCATGCATT CATCTGACGT CTGTAGTGTT TCAAATTTTT 2580
GCTTTATCTG GAAACTGAAG AGATATGGTG CAAGCTTGCC TTGGCTTTTG ATGTTTCATA 2640
TTACTGCAAG ATGAATGTAG TAGTTATTTT TTCTGTATGT TTCACTATGG TAGCAGACTT 2700
TGTCAAGGGA GCAGCTTATT GTTGGATCCG TTGAGATGAA GTATAACATT CATCTTGTGT 2760
TTCTTGCAAA AATGATTAAA CAAGCTCATT CTTTCACCAT AAATCTATGT CATTTGTCGA 2820
TAGCAGTGCA TA 2833
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0119 KEH27301 Medicago truncatula 88 0.0 833
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 84 0.0 807
WERAM-Thc-0026 EOX98961 Theobroma cacao 82 0.0 791
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 82 0.0 785
WERAM-Prp-0056 EMJ02177 Prunus persica 82 0.0 780
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 80 0.0 774
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 81 0.0 767
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 80 0.0 767
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 80 0.0 767
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 81 0.0 764
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 91 0.0 760
WERAM-Amt-0016 ERM94967 Amborella trichopoda 90 0.0 746
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 76 0.0 745
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 85 0.0 736
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 88 0.0 736
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 77 0.0 734
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 77 0.0 733
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 89 0.0 731
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 77 0.0 731
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 89 0.0 728
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 89 0.0 727
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 77 0.0 726
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 89 0.0 723
WERAM-Sei-0026 Si006243m Setaria italica 88 0.0 721
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 88 0.0 719
WERAM-Aet-0051 EMT16627 Aegilops tauschii 75 0.0 716
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 88 0.0 715
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 83 0.0 699
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 90 0.0 696
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 87 0.0 679
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 77 0.0 676
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 68 0.0 632
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 71 3e-172 602
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 68 1e-167 587
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 68 1e-167 587
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 68 2e-167 586
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 68 2e-167 586
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 68 2e-167 586
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 67 3e-167 585
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 67 3e-167 585
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 67 3e-167 585
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 68 3e-167 585
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 67 3e-167 585
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 67 3e-167 585
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 68 3e-167 585
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 67 3e-167 585
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 67 3e-167 585
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 67 1e-166 583
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 67 1e-166 583
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 67 1e-166 583
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 67 7e-166 581
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 67 1e-165 580
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 67 1e-165 580
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 67 2e-165 580
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 66 2e-164 576
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 66 2e-163 573
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 66 7e-163 571
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 68 1e-162 570
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 68 1e-162 570
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 67 2e-162 570
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 67 2e-162 570
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 69 3e-162 569
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 67 4e-162 568
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 68 5e-162 568
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 65 5e-162 568
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 68 5e-162 568
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 69 7e-162 567
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 69 9e-162 567
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 69 1e-161 567
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 69 1e-161 567
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 68 1e-161 566
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 66 1e-161 566
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 66 2e-161 566
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 69 7e-161 564
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 68 8e-161 564
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 68 3e-160 562
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 64 3e-160 562
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 66 2e-159 560
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 89 3e-158 555
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 66 1e-157 553
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 66 2e-157 553
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 66 2e-157 553
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 66 2e-157 553
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 66 2e-157 553
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 67 8e-155 544
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 63 9e-154 540
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 1e-153 540
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 67 2e-153 540
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 67 2e-153 539
WERAM-Coi-0024 EAS33504 Coccidioides immitis 62 6e-153 538
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 62 1e-152 536
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 62 2e-152 536
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 4e-152 535
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 62 8e-152 534
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 62 3e-151 532
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 66 4e-151 531
WERAM-Trv-0003 EHK19072 Trichoderma virens 62 5e-151 531
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 60 2e-150 529
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 61 5e-150 528
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 64 1e-149 527
WERAM-Cag-0003 CAG57932 Candida glabrata 61 1e-149 527
WERAM-Ved-0020 EGY15146 Verticillium dahliae 59 1e-149 527
WERAM-Asg-0034 AAS54885 Ashbya gossypii 61 6e-149 525
WERAM-Trr-0017 EGR48353 Trichoderma reesei 62 6e-149 525
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 61 1e-148 524
Created Date 25-Jun-2016