| Tag |
Content |
| WERAM ID |
WERAM-Ict-0103 |
| Ensembl Protein ID |
ENSSTOP00000010833.2 |
| Gene Name |
HDAC1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
7.40e-177 |
587.5 |
9 |
320 |
|
| Organism |
Ictidomys tridecemlineatus |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
+kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSSTOP00000010833.2 9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSSTOP00000010833.2 98 EDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+v+skv+e+f+P+avvlqcG+Dsl+gDrlg+f
ENSSTOP00000010833.2 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ikgha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l
ENSSTOP00000010833.2 275 NLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 320
*******************************************987 PP
|
Protein Sequence
(Fasta) | MAQTQGTRRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPVMSKVME MFQPSAVVLQ CGSDSLSGDR LGCFNLTIKG HAKCVEFVKS FNLPMLMLGG 300
GGYTIRNVAR CWTYETAVAL DTEILCSSDK RIACEEEFSD SDEEGEGGRK NSSNFKKAKR 360
VKTEDEKEKD PEEKKEVTEE EKSKEEKPEA KGVKEEVKLA Protein Fasta Sequence
>ENSSTOP00000010833.2|Class-I|Ictidomys tridecemlineatus
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEILCSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKSKEEKPEAKGVKEEVKLA |
Nucleotide Sequence
(Fasta) | ATGGCGCAGA CTCAGGGCAC CAGGAGGAAA GTCTGTTACT ACTACGACGG GGATGTTGGA 60
AATTACTATT ATGGACAAGG CCATCCAATG AAGCCTCACC GAATCCGCAT GACTCACAAT 120
TTGCTGCTCA ACTATGGTCT CTACCGAAAA ATGGAAATTT ATCGCCCTCA CAAAGCCAAT 180
GCTGAGGAGA TGACCAAGTA CCATAGTGAT GACTACATCA AATTCTTGCG CTCCATTCGT 240
CCAGATAACA TGTCTGAGTA TAGCAAGCAG ATGCAGAGAT TCAATGTTGG TGAGGACTGT 300
CCGGTATTCG ATGGCCTGTT TGAGTTCTGT CAGTTGTCTA CTGGTGGCTC TGTCGCAAGT 360
GCCGTGAAAC TTAATAAGCA GCAGACGGAC ATCGCTGTGA ATTGGGCTGG GGGCCTGCAC 420
CATGCAAAGA AGTCCGAGGC ATCAGGCTTC TGTTACGTCA ATGATATCGT CTTGGCCATC 480
CTGGAACTGC TAAAGTATCA CCAGAGGGTG CTGTATATTG ACATTGATAT TCACCATGGC 540
GATGGCGTGG AAGAGGCCTT CTATACCACA GACCGGGTCA TGACTGTGTC CTTTCATAAA 600
TATGGAGAGT ACTTCCCAGG AACTGGGGAC TTACGGGATA TTGGGGCTGG CAAAGGCAAG 660
TATTATGCTG TTAACTACCC ACTCCGAGAT GGGATTGATG ACGAGTCCTA TGAGGCCATT 720
TTCAAGCCGG TCATGTCCAA AGTAATGGAG ATGTTCCAGC CTAGTGCGGT GGTCTTACAG 780
TGTGGCTCAG ATTCCTTGTC TGGGGATCGG TTAGGTTGCT TCAATCTGAC CATCAAAGGG 840
CATGCCAAGT GTGTGGAATT TGTCAAGAGC TTCAACCTGC CTATGCTGAT GCTGGGAGGA 900
GGTGGTTACA CCATTCGTAA TGTGGCCCGG TGCTGGACAT ACGAAACAGC TGTGGCTCTG 960
GACACAGAGA TCCTCTGTTC CTCTGACAAA CGAATTGCCT GTGAGGAAGA ATTCTCTGAC 1020
TCGGATGAGG AAGGAGAGGG TGGCCGCAAA AACTCTTCCA ACTTCAAAAA AGCCAAGAGA 1080
GTCAAAACAG AGGATGAAAA AGAGAAAGAC CCAGAGGAGA AGAAAGAAGT CACAGAAGAG 1140
GAGAAATCCA AGGAGGAGAA GCCAGAAGCC AAAGGGGTCA AAGAGGAGGT CAAGTTGGCC 1200
TGAGCAGACT TCTCCAGC
1219Nucleotide Fasta Sequence
>ENSSTOP00000010833.2|Class-I|Ictidomys tridecemlineatus
ATGGCGCAGACTCAGGGCACCAGGAGGAAAGTCTGTTACTACTACGACGGGGATGTTGGAAATTACTATTATGGACAAGGCCATCCAATGAAGCCTCACCGAATCCGCATGACTCACAATTTGCTGCTCAACTATGGTCTCTACCGAAAAATGGAAATTTATCGCCCTCACAAAGCCAATGCTGAGGAGATGACCAAGTACCATAGTGATGACTACATCAAATTCTTGCGCTCCATTCGTCCAGATAACATGTCTGAGTATAGCAAGCAGATGCAGAGATTCAATGTTGGTGAGGACTGTCCGGTATTCGATGGCCTGTTTGAGTTCTGTCAGTTGTCTACTGGTGGCTCTGTCGCAAGTGCCGTGAAACTTAATAAGCAGCAGACGGACATCGCTGTGAATTGGGCTGGGGGCCTGCACCATGCAAAGAAGTCCGAGGCATCAGGCTTCTGTTACGTCAATGATATCGTCTTGGCCATCCTGGAACTGCTAAAGTATCACCAGAGGGTGCTGTATATTGACATTGATATTCACCATGGCGATGGCGTGGAAGAGGCCTTCTATACCACAGACCGGGTCATGACTGTGTCCTTTCATAAATATGGAGAGTACTTCCCAGGAACTGGGGACTTACGGGATATTGGGGCTGGCAAAGGCAAGTATTATGCTGTTAACTACCCACTCCGAGATGGGATTGATGACGAGTCCTATGAGGCCATTTTCAAGCCGGTCATGTCCAAAGTAATGGAGATGTTCCAGCCTAGTGCGGTGGTCTTACAGTGTGGCTCAGATTCCTTGTCTGGGGATCGGTTAGGTTGCTTCAATCTGACCATCAAAGGGCATGCCAAGTGTGTGGAATTTGTCAAGAGCTTCAACCTGCCTATGCTGATGCTGGGAGGAGGTGGTTACACCATTCGTAATGTGGCCCGGTGCTGGACATACGAAACAGCTGTGGCTCTGGACACAGAGATCCTCTGTTCCTCTGACAAACGAATTGCCTGTGAGGAAGAATTCTCTGACTCGGATGAGGAAGGAGAGGGTGGCCGCAAAAACTCTTCCAACTTCAAAAAAGCCAAGAGAGTCAAAACAGAGGATGAAAAAGAGAAAGACCCAGAGGAGAAGAAAGAAGTCACAGAAGAGGAGAAATCCAAGGAGGAGAAGCCAGAAGCCAAAGGGGTCAAAGAGGAGGTCAAGTTGGCCTGAGCAGACTTCTCCAGC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
