Tag |
Content |
WERAM ID |
WERAM-Leo-0014 |
Ensembl Protein ID |
ENSLOCP00000002993.1 |
Gene Name |
hdac1 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
6.60e-177 |
587.8 |
9 |
320 |
|
Organism |
Lepisosteus oculatus |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg ENSLOCP00000002993.1 9 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97 589************************************************************************************** PP class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178 edcPvfdglfe+cql+tG+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea ENSLOCP00000002993.1 98 EDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186 ***************************************************************************************** PP class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267 fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+avvlqcGaDsl+gDrlg+f ENSLOCP00000002993.1 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 274 *****************.*********************************************************************** PP class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l ENSLOCP00000002993.1 275 NLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 320 *******************************************987 PP
|
Protein Sequence (Fasta) | MALTQGTKKK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60 AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAG 120 AVKLNKQQTD IAINWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180 DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240 FKPIMAKVME MYQPSAVVLQ CGADSLSGDR LGCFNLTIKG HAKCVEYMKS FNLPLLMLGG 300 GGYTIRNVAR CWTYETAVAL DSTIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNDYLE 360 KIKQRLFENL RMLPHAPGVQ MQAIPEDAVQ EDSGDEEEED PDKRISIRAH DKRIACDEEF 420 SDSEDEGQGG RKNAASFKKA KRVKTEEEKD GEEKKDVKEE EKAAEEKMET KGAKEELKMA 480 Protein Fasta Sequence
>ENSLOCP00000002993.1|Class-I|Lepisosteus oculatus MALTQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPDKRISIRAHDKRIACDEEFSDSEDEGQGGRKNAASFKKAKRVKTEEEKDGEEKKDVKEEEKAAEEKMETKGAKEELKMA
|
Nucleotide Sequence (Fasta) | ATTTTATTGT TACCCCTGCC GCCCTGGACA CTAAACCACA ATGGTACAGT CCTGAAGTAA 60 AAATGAGATT TCCGAATATT GGACATTTTG AAACTGGAGC CATTTTGGAT CCCACGGAGA 120 ACACCGCTTT AGGGTTGAAC TGGACGGATA ACCGGAGCCA AGATGGCGCT CAAAGAAACA 180 CAGTTTCATA CCCTTGTTTA TCTTCTGTAG AGGGGCGGAT AACCCATTCG CCTGCGAAGG 240 ACGCGATTGG ACAAAAGGGG GAAAGACGGC CGCCCGCTAC GGTCCGAGCT AGTCTCTGAT 300 TGGCTCCAGC GGTGTCAATC CAGGTTCCCG GTTGTGGCTA GGGCTGCGTA GCGCCCGGTA 360 GACAGGCCGT GGCTGTGTCT GGAGGTAAAA TGGCGCTGAC TCAAGGAACA AAGAAAAAAG 420 TTTGTTATTA TTATGACGGG GATGTTGGGA ACTATTACTA CGGTCAGGGT CACCCCATGA 480 AGCCACACCG AATCCGGATG ACCCACAACT TGCTCCTGAA CTATGGGCTG TACAGGAAGA 540 TGGAAATTTA TCGTCCGCAC AAGGCGAACG CCGAGGAGAT GACCAAGTAC CACAGCGACG 600 ACTACATCAA GTTCCTGAGG TCGATCCGCC CGGACAACAT GTCGGAGTAC AGCAAGCAGA 660 TGCAGAGATT TAACGTTGGA GAAGACTGTC CTGTGTTTGA TGGGCTTTTC GAGTTCTGCC 720 AGCTGTCCAC AGGAGGTTCA GTGGCTGGGG CAGTGAAACT AAACAAGCAG CAGACTGATA 780 TAGCCATCAA CTGGGCTGGC GGGCTTCACC ACGCCAAGAA ATCAGAGGCT TCTGGGTTTT 840 GCTACGTGAA CGATATTGTC CTAGCCATCC TGGAGCTGTT GAAATACCAC CAAAGAGTCC 900 TCTACATCGA CATTGATATA CACCACGGAG ATGGCGTGGA GGAAGCTTTC TACACCACAG 960 ACCGAGTCAT GACTGTGTCC TTTCATAAAT ACGGAGAATA CTTCCCTGGC ACTGGAGATC 1020 TCCGAGACAT TGGAGCAGGC AAGGGCAAGT ATTATGCTGT GAACTACCCA CTCAGGGATG 1080 GAATAGATGA TGAGTCTTAT GAAGCCATAT TTAAACCAAT CATGGCCAAA GTGATGGAGA 1140 TGTACCAGCC GAGCGCGGTT GTGCTTCAGT GTGGTGCGGA CTCGTTATCT GGGGACAGGC 1200 TTGGGTGTTT CAACCTGACA ATTAAAGGCC ACGCCAAGTG TGTGGAGTAC ATGAAGAGCT 1260 TCAACCTCCC CCTGCTGATG CTGGGGGGCG GAGGCTACAC CATCCGCAAC GTGGCACGCT 1320 GCTGGACGTA CGAGACCGCC GTGGCGCTGG ACAGCACCAT TCCCAACGAG CTACCCTATA 1380 ACGATTACTT TGAATACTTT GGACCTGATT TCAAGCTCCA CATCAGCCCC TCAAACATGA 1440 CTAACCAGAA CACAAATGAT TACCTGGAGA AAATAAAGCA GCGCCTGTTC GAGAACCTGC 1500 GCATGCTGCC CCACGCGCCA GGGGTGCAGA TGCAGGCCAT CCCCGAGGAC GCCGTGCAGG 1560 AGGACAGTGG GGACGAGGAG GAGGAGGACC CCGACAAGCG CATCTCCATC CGGGCTCACG 1620 ACAAGAGGAT AGCCTGTGAT GAGGAGTTCT CGGACTCCGA GGATGAAGGC CAGGGTGGCA 1680 GAAAGAACGC TGCCAGTTTC AAGAAGGCAA AGAGAGTGAA AACGGAGGAG GAGAAGGATG 1740 GAGAGGAGAA GAAGGATGTA AAAGAGGAGG AGAAAGCCGC AGAAGAAAAA ATGGAAACAA 1800 AGGGGGCAAA GGAGGAACTG AAGATGGCAT GAGAGCTGCT AGCCTGGGTC TTTTCAGCAT 1860 TGCATGAAAT TCCAGTAGAG AGAGAGCCCT TTAGAAATCC ACATTGAAAT GATACCGAGA 1920 CTATGTAAAT TATTTTCTAA ATGCATTTTA ATAATTGAGT TCTAATAAGG ACTAAAAAAA 1980 AGTGGAGTTA TTTTTTTTTT AATGCCACTG ATTTGGGATT TTTTTGTTCC TGTTCAAGCA 2040 AAACTATTTA AAATGTTTAA GATCACAATT CTCTTCTGAA AACTCCCTTT AATGAAGCAG 2100 GCTGAAATGA TACAGACCAG GGGTGTAACA ACATTTATAA AGTTAGTAGA AACCTTAAAC 2160 CTTAACTTTT TTTTTCCTTA TACATTTTAG GTCTTTGTTC AGCTTCAGTA AGTTATTTAA 2220 ATCATGGCAT TTCTGAAGGA CGTGTGGCTT CTACAGTTTC ATTAATGTAC ACCATGTTGC 2280 CACTTAGTTT AGTAACTGTT GTGTTCTGCA GAGGTTTAAC ATCAGTATTC GAAGAATTTG 2340 TGGGGCCTTA GGTTTGTCGT TTTTAAAGAT CTGTCAGTCT GGATTTCATT TAATTCCCCG 2400 AACACATAAC AAAAACCGGA CAGCTGAACT GACTTCAGTT TTCTATAATG TGAATTGTAA 2460 CCGATTCAGC ACCATTTTGG AATAATTCAG GTTCCACCTG CGGCAGTAAC AATAGGAAGA 2520 AACTAGCGAT GTGGCGGCTA CTTTGGGTTT TTAGCCATGC GTATCTCCTG TTCTCTTGAT 2580 AACCAAATAA CCATGTGGTG AGAGCAGCAA GGTAGTCCTT CATCTTGTTA AAAGCAGTTC 2640 TGCGTGGCTC CCCCCCACGA TGGTAACCAT CCGCCGCCGC GGTGTGGCCG GTGTCATGGC 2700 AGGTTAGGAA ATGAAAGGTA CTGTTAAAAA TGACTTTGGG CGGGCTGGGT GCTCTCCCCC 2760 TCGGTGACAG GAGGGATGAT GTCCCACTAT TCCTGATTCA GTCTGCTAAA CCTGTGGTCC 2820 GCTTGCTTGT CTCCAGGACC CGAGTCTGCC TCCCGGGCCT CCCCAGGAGT GCTGCGGTTG 2880 CAATTCAGAA AGGAAATTGA GACCTAACAT TACTTTGAAC AGCCAGAGTG CATAAAGACC 2940 AGCTTGTGCA GCCGCCTGCC GCTCAGAGTG AAACGCTCGA GGCTGAACGT GTTCAGTGTA 3000 GACGGTGTCC TCGTCGGAGC TGCAGAGTGA GAATGCAGGT CCTTGGAATC AGTGTTGCAG 3060 AAGAAGCTGG CTTGTTTGTT TTGCAGCTCT CAAAGTCTTT TTGTTATTAT TATTATTATT 3120 ATTATTATTA TTATTATTAT TCAAAGGGGC CTGGTCGTGT AGCAGTTTTA AATTGTATGC 3180 GATCGATGAT TTTGAGGTGC GTGAAGAAGA GTCCAAAGTT TTGAAGGAAG GGGGGAACCC 3240 TTGTTAGGTT GATCTGTAAG TAAAGCAACT TCGAAAAAGA CTTTTTCCAT CTGGGTTAGC 3300 TTTGAATCTT GGATATCTGT CGGAGGGATG GATTTTAATC CTGCCTCCGC GATCGTTCCT 3360 TCGGGGATGG TTTTAAGTTC CCGCTGCAGA ACGTCAGTCT GGTCAACCAG AAGTGAAGGT 3420 GTTATTCTTG GTGATGAAAT TTCCATGTGT TAGACCGAAG CTGTGCTGTA TGTTGTGCTC 3480 TCTTACAACT GTACTGTCTC ACATTTCTTC CAGGAGCTCT GAGAGCGGGT GTGATGTCGT 3540 ATGAGAGTTT TTTTTTTCCT TCCTCTTGAA ATACTTATTT TACTTTTTGG AAATATTTGT 3600 ATTGAAATGG AAAAGAATTT CTACCTGGCA ATGTTTTTTG TTCTGTATTT TAAATAAAGT 3660 ATGTGGTTTA CCTATTGCAC TGTGTTGGGC CTCGCATCTT TGCACTGCAG AAGACGACGT 3720 TGCAGAGAAG GGCGGG
3737Nucleotide Fasta Sequence
>ENSLOCP00000002993.1|Class-I|Lepisosteus oculatus ATTTTATTGTTACCCCTGCCGCCCTGGACACTAAACCACAATGGTACAGTCCTGAAGTAAAAATGAGATTTCCGAATATTGGACATTTTGAAACTGGAGCCATTTTGGATCCCACGGAGAACACCGCTTTAGGGTTGAACTGGACGGATAACCGGAGCCAAGATGGCGCTCAAAGAAACACAGTTTCATACCCTTGTTTATCTTCTGTAGAGGGGCGGATAACCCATTCGCCTGCGAAGGACGCGATTGGACAAAAGGGGGAAAGACGGCCGCCCGCTACGGTCCGAGCTAGTCTCTGATTGGCTCCAGCGGTGTCAATCCAGGTTCCCGGTTGTGGCTAGGGCTGCGTAGCGCCCGGTAGACAGGCCGTGGCTGTGTCTGGAGGTAAAATGGCGCTGACTCAAGGAACAAAGAAAAAAGTTTGTTATTATTATGACGGGGATGTTGGGAACTATTACTACGGTCAGGGTCACCCCATGAAGCCACACCGAATCCGGATGACCCACAACTTGCTCCTGAACTATGGGCTGTACAGGAAGATGGAAATTTATCGTCCGCACAAGGCGAACGCCGAGGAGATGACCAAGTACCACAGCGACGACTACATCAAGTTCCTGAGGTCGATCCGCCCGGACAACATGTCGGAGTACAGCAAGCAGATGCAGAGATTTAACGTTGGAGAAGACTGTCCTGTGTTTGATGGGCTTTTCGAGTTCTGCCAGCTGTCCACAGGAGGTTCAGTGGCTGGGGCAGTGAAACTAAACAAGCAGCAGACTGATATAGCCATCAACTGGGCTGGCGGGCTTCACCACGCCAAGAAATCAGAGGCTTCTGGGTTTTGCTACGTGAACGATATTGTCCTAGCCATCCTGGAGCTGTTGAAATACCACCAAAGAGTCCTCTACATCGACATTGATATACACCACGGAGATGGCGTGGAGGAAGCTTTCTACACCACAGACCGAGTCATGACTGTGTCCTTTCATAAATACGGAGAATACTTCCCTGGCACTGGAGATCTCCGAGACATTGGAGCAGGCAAGGGCAAGTATTATGCTGTGAACTACCCACTCAGGGATGGAATAGATGATGAGTCTTATGAAGCCATATTTAAACCAATCATGGCCAAAGTGATGGAGATGTACCAGCCGAGCGCGGTTGTGCTTCAGTGTGGTGCGGACTCGTTATCTGGGGACAGGCTTGGGTGTTTCAACCTGACAATTAAAGGCCACGCCAAGTGTGTGGAGTACATGAAGAGCTTCAACCTCCCCCTGCTGATGCTGGGGGGCGGAGGCTACACCATCCGCAACGTGGCACGCTGCTGGACGTACGAGACCGCCGTGGCGCTGGACAGCACCATTCCCAACGAGCTACCCTATAACGATTACTTTGAATACTTTGGACCTGATTTCAAGCTCCACATCAGCCCCTCAAACATGACTAACCAGAACACAAATGATTACCTGGAGAAAATAAAGCAGCGCCTGTTCGAGAACCTGCGCATGCTGCCCCACGCGCCAGGGGTGCAGATGCAGGCCATCCCCGAGGACGCCGTGCAGGAGGACAGTGGGGACGAGGAGGAGGAGGACCCCGACAAGCGCATCTCCATCCGGGCTCACGACAAGAGGATAGCCTGTGATGAGGAGTTCTCGGACTCCGAGGATGAAGGCCAGGGTGGCAGAAAGAACGCTGCCAGTTTCAAGAAGGCAAAGAGAGTGAAAACGGAGGAGGAGAAGGATGGAGAGGAGAAGAAGGATGTAAAAGAGGAGGAGAAAGCCGCAGAAGAAAAAATGGAAACAAAGGGGGCAAAGGAGGAACTGAAGATGGCATGAGAGCTGCTAGCCTGGGTCTTTTCAGCATTGCATGAAATTCCAGTAGAGAGAGAGCCCTTTAGAAATCCACATTGAAATGATACCGAGACTATGTAAATTATTTTCTAAATGCATTTTAATAATTGAGTTCTAATAAGGACTAAAAAAAAGTGGAGTTATTTTTTTTTTAATGCCACTGATTTGGGATTTTTTTGTTCCTGTTCAAGCAAAACTATTTAAAATGTTTAAGATCACAATTCTCTTCTGAAAACTCCCTTTAATGAAGCAGGCTGAAATGATACAGACCAGGGGTGTAACAACATTTATAAAGTTAGTAGAAACCTTAAACCTTAACTTTTTTTTTCCTTATACATTTTAGGTCTTTGTTCAGCTTCAGTAAGTTATTTAAATCATGGCATTTCTGAAGGACGTGTGGCTTCTACAGTTTCATTAATGTACACCATGTTGCCACTTAGTTTAGTAACTGTTGTGTTCTGCAGAGGTTTAACATCAGTATTCGAAGAATTTGTGGGGCCTTAGGTTTGTCGTTTTTAAAGATCTGTCAGTCTGGATTTCATTTAATTCCCCGAACACATAACAAAAACCGGACAGCTGAACTGACTTCAGTTTTCTATAATGTGAATTGTAACCGATTCAGCACCATTTTGGAATAATTCAGGTTCCACCTGCGGCAGTAACAATAGGAAGAAACTAGCGATGTGGCGGCTACTTTGGGTTTTTAGCCATGCGTATCTCCTGTTCTCTTGATAACCAAATAACCATGTGGTGAGAGCAGCAAGGTAGTCCTTCATCTTGTTAAAAGCAGTTCTGCGTGGCTCCCCCCCACGATGGTAACCATCCGCCGCCGCGGTGTGGCCGGTGTCATGGCAGGTTAGGAAATGAAAGGTACTGTTAAAAATGACTTTGGGCGGGCTGGGTGCTCTCCCCCTCGGTGACAGGAGGGATGATGTCCCACTATTCCTGATTCAGTCTGCTAAACCTGTGGTCCGCTTGCTTGTCTCCAGGACCCGAGTCTGCCTCCCGGGCCTCCCCAGGAGTGCTGCGGTTGCAATTCAGAAAGGAAATTGAGACCTAACATTACTTTGAACAGCCAGAGTGCATAAAGACCAGCTTGTGCAGCCGCCTGCCGCTCAGAGTGAAACGCTCGAGGCTGAACGTGTTCAGTGTAGACGGTGTCCTCGTCGGAGCTGCAGAGTGAGAATGCAGGTCCTTGGAATCAGTGTTGCAGAAGAAGCTGGCTTGTTTGTTTTGCAGCTCTCAAAGTCTTTTTGTTATTATTATTATTATTATTATTATTATTATTATTATTCAAAGGGGCCTGGTCGTGTAGCAGTTTTAAATTGTATGCGATCGATGATTTTGAGGTGCGTGAAGAAGAGTCCAAAGTTTTGAAGGAAGGGGGGAACCCTTGTTAGGTTGATCTGTAAGTAAAGCAACTTCGAAAAAGACTTTTTCCATCTGGGTTAGCTTTGAATCTTGGATATCTGTCGGAGGGATGGATTTTAATCCTGCCTCCGCGATCGTTCCTTCGGGGATGGTTTTAAGTTCCCGCTGCAGAACGTCAGTCTGGTCAACCAGAAGTGAAGGTGTTATTCTTGGTGATGAAATTTCCATGTGTTAGACCGAAGCTGTGCTGTATGTTGTGCTCTCTTACAACTGTACTGTCTCACATTTCTTCCAGGAGCTCTGAGAGCGGGTGTGATGTCGTATGAGAGTTTTTTTTTTCCTTCCTCTTGAAATACTTATTTTACTTTTTGGAAATATTTGTATTGAAATGGAAAAGAATTTCTACCTGGCAATGTTTTTTGTTCTGTATTTTAAATAAAGTATGTGGTTTACCTATTGCACTGTGTTGGGCCTCGCATCTTTGCACTGCAGAAGACGACGTTGCAGAGAAGGGCGGG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |