| Tag |
Content |
| WERAM ID |
WERAM-Gam-0211 |
| Ensembl Protein ID |
ENSGMOP00000020496.1 |
| Gene Name |
hdac1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.10e-176 |
586.1 |
9 |
320 |
|
| Organism |
Gadus morhua |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+ ee++k+hs++yi+fl++++p+n++e+sk++++fnvg
ENSGMOP00000020496.1 9 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97
589************************************************************************************** PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
edcPvfdglfe+cql+tG+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
ENSGMOP00000020496.1 98 EDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
***************************************************************************************** PP
class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+avvlqcGaDsl+gDrlg+f
ENSGMOP00000020496.1 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 274
*****************.*********************************************************************** PP
class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l
ENSGMOP00000020496.1 275 NLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 320
*******************************************987 PP
|
Protein Sequence
(Fasta) | MALSSSSKKK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60
GEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAG 120
AVKLNKQQTD IAINWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240
FKPIMAKVME MYQPSAVVLQ CGADSLSGDR LGCFNLTIKG HAKCVEYMKS FNLPLLMLGG 300
GGYTIRNVAR CWTYETAVAL DSPIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNDYLE 360
KIKQRLFENL RMLPHAPGVQ MQAIPEDAVQ EDSGDEEEDD PNKRISIRAH DKRIACEEEF 420
SDSEDEGEGG RRNTASFKKA KRTKTEVKEE EKQPEEEKMD TSKPKEESKT P 471Protein Fasta Sequence
>ENSGMOP00000020496.1|Class-I|Gadus morhua
MALSSSSKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVALDSPIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEDDPNKRISIRAHDKRIACEEEFSDSEDEGEGGRRNTASFKKAKRTKTEVKEEEKQPEEEKMDTSKPKEESKTP |
Nucleotide Sequence
(Fasta) | ATGGCGCTGA GTTCAAGCTC CAAGAAAAAA GTTTGCTACT ATTATGATGG TGATGTCGGG 60
AATTACTACT ATGGCCAGGG ACATCCAATG AAGCCCCACC GCATCCGCAT GACCCACAAC 120
CTGTTGCTGA ACTATGGCCT CTACAGAAAG ATGGAGATAT ATCGTCCTCA CAAAGCCAAT 180
GGTGAGGAGA TGACCAAGTA TCACAGTGAT GACTACATTA AGTTTTTACG ATCCATCCGG 240
CCAGACAACA TGTCTGAGTA CAGCAAACAG ATGCAGCGAT TTAATGTGGG GGAGGACTGT 300
CCAGTGTTTG ACGGACTGTT TGAGTTCTGC CAGCTGTCCA CGGGAGGCTC TGTTGCGGGT 360
GCTGTGAAGC TGAACAAGCA GCAGACGGAC ATAGCCATCA ACTGGGCTGG GGGCTTGCAT 420
CACGCCAAGA AGTCCGAAGC CTCGGGTTTC TGCTACGTCA ACGACATCGT CCTGGCTATC 480
CTCGAGTTAC TGAAATACCA CCAGAGGGTT CTCTACATCG ACATCGATAT CCACCACGGA 540
GACGGCGTGG AGGAGGCCTT CTACACCACG GACCGCGTCA TGACCGTGTC CTTCCACAAG 600
TACGGGGAGT ACTTCCCTGG CACCGGAGAC TTGAGGGACA TTGGTGCAGG GAAGGGAAAA 660
TATTATGCAG TGAATTACCC ACTGCGGGAC GGGATCGACG ACGAATCGTA CGAAGCCATC 720
TTTAAGCCGA TCATGGCCAA GGTGATGGAG ATGTACCAAC CTTCTGCTGT GGTGCTCCAG 780
TGTGGAGCAG ATTCTTTGTC TGGAGATCGG CTTGGCTGCT TTAACCTCAC CATCAAAGGC 840
CATGCCAAGT GTGTGGAGTA CATGAAGAGC TTCAATCTGC CCCTGCTGAT GCTGGGCGGC 900
GGGGGCTACA CCATCCGCAA CGTGGCCCGC TGCTGGACCT ACGAGACGGC CGTGGCCCTG 960
GACAGCCCCA TCCCCAACGA GCTGCCGTAC AACGACTACT TTGAGTACTT CGGGCCGGAC 1020
TTCAAGCTGC ACATCAGCCC GTCCAACATG ACCAACCAGA ACACCAACGA CTACCTGGAG 1080
AAGATCAAGC AGCGTCTGTT TGAGAACCTG CGCATGCTGC CCCACGCGCC CGGCGTGCAG 1140
ATGCAGGCCA TCCCGGAGGA CGCCGTGCAG GAGGACAGCG GCGACGAGGA GGAGGACGAC 1200
CCCAACAAGC GCATCTCCAT TCGGGCCCAC GACAAGCGGA TAGCATGCGA GGAAGAGTTC 1260
TCCGACTCGG AAGACGAAGG CGAGGGGGGC CGGCGGAACA CGGCCAGCTT CAAGAAGGCC 1320
AAGCGCACAA AGACAGAAGT GAAGGAAGAA GAGAAGCAGC CCGAAGAGGA GAAAATGGAC 1380
ACGTCGAAGC CGAAAGAAGA GTCCAAGACG CCCTGA
1417Nucleotide Fasta Sequence
>ENSGMOP00000020496.1|Class-I|Gadus morhua
ATGGCGCTGAGTTCAAGCTCCAAGAAAAAAGTTTGCTACTATTATGATGGTGATGTCGGGAATTACTACTATGGCCAGGGACATCCAATGAAGCCCCACCGCATCCGCATGACCCACAACCTGTTGCTGAACTATGGCCTCTACAGAAAGATGGAGATATATCGTCCTCACAAAGCCAATGGTGAGGAGATGACCAAGTATCACAGTGATGACTACATTAAGTTTTTACGATCCATCCGGCCAGACAACATGTCTGAGTACAGCAAACAGATGCAGCGATTTAATGTGGGGGAGGACTGTCCAGTGTTTGACGGACTGTTTGAGTTCTGCCAGCTGTCCACGGGAGGCTCTGTTGCGGGTGCTGTGAAGCTGAACAAGCAGCAGACGGACATAGCCATCAACTGGGCTGGGGGCTTGCATCACGCCAAGAAGTCCGAAGCCTCGGGTTTCTGCTACGTCAACGACATCGTCCTGGCTATCCTCGAGTTACTGAAATACCACCAGAGGGTTCTCTACATCGACATCGATATCCACCACGGAGACGGCGTGGAGGAGGCCTTCTACACCACGGACCGCGTCATGACCGTGTCCTTCCACAAGTACGGGGAGTACTTCCCTGGCACCGGAGACTTGAGGGACATTGGTGCAGGGAAGGGAAAATATTATGCAGTGAATTACCCACTGCGGGACGGGATCGACGACGAATCGTACGAAGCCATCTTTAAGCCGATCATGGCCAAGGTGATGGAGATGTACCAACCTTCTGCTGTGGTGCTCCAGTGTGGAGCAGATTCTTTGTCTGGAGATCGGCTTGGCTGCTTTAACCTCACCATCAAAGGCCATGCCAAGTGTGTGGAGTACATGAAGAGCTTCAATCTGCCCCTGCTGATGCTGGGCGGCGGGGGCTACACCATCCGCAACGTGGCCCGCTGCTGGACCTACGAGACGGCCGTGGCCCTGGACAGCCCCATCCCCAACGAGCTGCCGTACAACGACTACTTTGAGTACTTCGGGCCGGACTTCAAGCTGCACATCAGCCCGTCCAACATGACCAACCAGAACACCAACGACTACCTGGAGAAGATCAAGCAGCGTCTGTTTGAGAACCTGCGCATGCTGCCCCACGCGCCCGGCGTGCAGATGCAGGCCATCCCGGAGGACGCCGTGCAGGAGGACAGCGGCGACGAGGAGGAGGACGACCCCAACAAGCGCATCTCCATTCGGGCCCACGACAAGCGGATAGCATGCGAGGAAGAGTTCTCCGACTCGGAAGACGAAGGCGAGGGGGGCCGGCGGAACACGGCCAGCTTCAAGAAGGCCAAGCGCACAAAGACAGAAGTGAAGGAAGAAGAGAAGCAGCCCGAAGAGGAGAAAATGGACACGTCGAAGCCGAAAGAAGAGTCCAAGACGCCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
