Tag |
Content |
WERAM ID |
WERAM-Gaga-0034 |
Ensembl Protein ID |
ENSGALP00000005212.3 |
Gene Name |
HDAC1 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
1.10e-176 |
586.6 |
9 |
320 |
|
Organism |
Gallus gallus |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 +kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+ka+aee++k+hs++yi+fl++++p+n++e+sk++++fnvg ENSGALP00000005212.3 9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 97 589************************************************************************************** PP class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178 edcPvfdglfe+cql++G+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea ENSGALP00000005212.3 98 EDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186 ***************************************************************************************** PP class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267 fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+viskv+e+f+P+avvlqcG+Dsl+gDrlg+f ENSGALP00000005212.3 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCF 274 *****************.*********************************************************************** PP class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 nl+ikgha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l ENSGALP00000005212.3 275 NLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 320 *******************************************987 PP
|
Protein Sequence (Fasta) | MALTQGTKRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAN 60 AEEMTKYHSD DYIKFLRSIR PDNMSEYSKQ MQRFNVGEDC PVFDGLFEFC QLSAGGSVAS 120 AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180 DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRDIGAGKGK YYAVNYPLRD GIDDESYEAI 240 FKPVISKVME TFQPSAVVLQ CGSDSLSGDR LGCFNLTIKG HAKCVEFVKS FNLPMLMLGG 300 GGYTIRNVAR CWTYETAVAL DTEIPNELPY NDYFEYFGPD FKLHISPSNM TNQNTNEYLE 360 KIKQRLFENL RMLPHAPGVQ MQPIPEDAVQ EDSGDEEEED PEKRISIRNS DKRISCDEEF 420 SDSEDEGEGG RKNVANFKKA KRVKTEEEKE EEEKKDEKEE EKAKEEKAEP KGVKEETKST 480 Protein Fasta Sequence
>ENSGALP00000005212.3|Class-I|Gallus gallus MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEKEEEEKKDEKEEEKAKEEKAEPKGVKEETKST
|
Nucleotide Sequence (Fasta) | GGCCCCGGCC GGTGGGGCGG GTTGCGTTGC GCTGCGCGGC GGTAGGGTCT GCGGCCGTGG 60 GGAGGCAGGA AAATGGCGCT GACGCAGGGG ACCAAGCGGA AAGTCTGCTA CTACTACGAC 120 GGTGATGTTG GAAACTATTA CTATGGCCAG GGACACCCCA TGAAGCCCCA CAGGATCCGG 180 ATGACCCACA ACCTACTGCT GAACTACGGC CTTTACAGGA AGATGGAGAT ATATCGCCCT 240 CACAAGGCGA ACGCGGAGGA GATGACCAAG TACCACAGTG ATGACTACAT CAAATTCCTG 300 AGATCCATCC GCCCAGACAA CATGTCTGAG TACAGCAAGC AGATGCAAAG ATTTAACGTT 360 GGGGAGGACT GCCCTGTGTT CGATGGGCTG TTTGAGTTCT GTCAGCTCTC TGCTGGAGGC 420 TCCGTTGCCA GCGCTGTGAA GCTGAACAAG CAACAGACAG ATATTGCTGT GAATTGGGCA 480 GGAGGCCTTC ACCACGCTAA GAAGTCGGAG GCTTCTGGCT TCTGTTATGT CAACGATATT 540 GTCCTGGCTA TCTTGGAGCT CTTAAAGTAT CACCAGAGGG TCCTGTATAT TGACATTGAT 600 ATTCACCATG GAGATGGTGT GGAGGAAGCC TTCTATACCA CAGACCGTGT GATGACCGTG 660 TCCTTTCATA AGTATGGAGA GTACTTCCCA GGAACAGGGG ACCTGCGGGA CATTGGTGCA 720 GGCAAAGGCA AATACTATGC TGTCAACTAT CCCCTCCGGG ATGGGATTGA TGATGAGTCC 780 TACGAGGCAA TATTCAAGCC GGTGATATCT AAAGTGATGG AGACATTCCA GCCTAGTGCA 840 GTTGTCCTGC AGTGCGGGTC GGATTCTCTG TCCGGGGACA GGCTGGGTTG TTTTAATCTG 900 ACCATCAAAG GTCATGCCAA GTGTGTGGAG TTTGTCAAAA GTTTTAATTT GCCTATGCTG 960 ATGCTGGGAG GAGGTGGCTA TACGATCCGC AACGTGGCCA GATGCTGGAC CTATGAGACT 1020 GCTGTGGCTT TGGACACTGA GATCCCAAAT GAGCTCCCAT ATAATGACTA TTTTGAGTAC 1080 TTCGGACCAG ACTTTAAGCT GCACATCAGT CCCTCAAACA TGACCAACCA GAATACCAAT 1140 GAGTATCTCG AGAAGATCAA GCAGCGTCTC TTTGAGAATC TGCGCATGCT GCCTCATGCC 1200 CCTGGCGTCC AGATGCAGCC AATTCCTGAG GATGCTGTTC AGGAAGACAG TGGAGATGAA 1260 GAAGAAGAAG ATCCTGAGAA GCGCATTTCA ATCCGCAATT CTGATAAGAG AATATCCTGT 1320 GATGAAGAAT TCTCTGACTC TGAAGATGAA GGGGAAGGAG GGCGCAAAAA TGTTGCCAAC 1380 TTTAAGAAGG CCAAGCGTGT GAAAACAGAG GAGGAAAAGG AGGAGGAGGA GAAGAAGGAT 1440 GAGAAAGAAG AGGAAAAAGC AAAAGAGGAG AAAGCCGAAC CCAAGGGGGT GAAGGAAGAG 1500 ACAAAATCCA CCTAAGATGG CTGCAGCTGG ACAGTACCTG TCAGTGCATA GTTATCGTAG 1560 GTTAGCTTCT CTGGTTGCCT CCCATTCCAC AGGATTTATA TTTTATATAT GTTTCTGTAT 1620 ATATTTCTAT ATAAATATAT AAATGACTTG AGAACTGTAA ATTATTCCTT GCTGCACTCC 1680 GCTGGGAGCA GACAGGGAGG ACTCTGCAGA GTAGAGAGAC CCGCACTGCC CAGGATTGGT 1740 GCCTGGGAAG TTTCACTCTT TGCCTTCCAC TGCCTCCTTA GTGTGTCTTT AAAAAGAATC 1800 ACTTCCTTTC TTTGCTCTCC TCTGAAGTAA CCACCCTTGA AAATGAATAA TTTAAGTAGA 1860 AGTAGTGTCT GCATTTCAGG TTAGGTGGAA AGATGGCCAT GAAACTTTTT TTTTTCTTCT 1920 TTTCCTTTCT CTTTTATTTT ATTTTATTTT ATCTTTTTTT GTGGGAGATA TGAATTCCCA 1980 AATTAAGCCT GTGAGAGACT GAGTGTTCCT TTGGTCTTCA GTCTGATTCC ACCATGGCAA 2040 GTAACTGCAA GCTGGTGCCG CTTCTCAGGG TCAAATAGTG CAGTTCTTGA ACAGAGTTGG 2100 CTACCTTCCT GCAGCAAACT GGTGGAAAGA GATGAAGCAG CTTACAAGCA GATCAGAAAA 2160 TCGCTCGAGT CAATCTGCCC AAGAGCCCTG CAGGTATAGA TCTGGAAAAT GCCAAGTGAA 2220 AATCACCCTG ATGTGGTGGT GAACGTTTTC CAGGATGTGG CAGACCTCAT TAGCGGGGCA 2280 GCGCTGTGCA TCGCCCATAG GAGAAGGGAT GGAATCTTTA TGCACTTGTT TCCTATACCT 2340 GTGCCCCTCT TTGCAGGGAG GAGGTGAGTT ACTGCCCATC TGGCTGCCTG CTTCACTCTG 2400 CTTCTGCCCA CAGCTTCGTG TGCTGTAATT GCTTCTCAGT ACTGATCTGT GTCCTTGCTG 2460 AAACCGTAGC AGAGCAGGAC AGACAGACGG AGCCCAGCTG ATGCCTCTGC TCCACGTGTC 2520 ACTCGCTGAG AAACTCTTTC TGAAGCAGAC ATGTTTTCAA GTGGAACCTT TCCTGTCTTT 2580 GCTCTCAAGG CCAGTAAATG CGGAGAGCCT TTTTATCAGC AGTCTGAGCT GTTATCTGTA 2640 CGAGGGAACA GCAGATGGGG CTCTGTACGT TTTTATAACT GCTCCTCTTC CTCCTCCCAC 2700 ACGTTATCTC ACACCCAAAG GTCTTTTGTG ATCAGAGCTG GCCTTTCTCA CACCTTGCTT 2760 TGTACAGCTG AGCGTGAGAT GAGCGCTCCG TGGGATGCTT TGCTGAGCTC CGACTTTGCA 2820 GAAGTTCTGC AGGCAGTTCT GACTCGCTGC TCTCCTTCCT CCGGGGGATT CCTCTGTCCA 2880 TAAGAGGATC TGTACCTCCC CCGGGGTGCT GCTGGTGGTT TCAACTCTAA TAATGCTGCT 2940 AACTTAACAC AGGTTATTTT TAAAATGTTT TATTTTTTTA AATGCTTTTT TCCCCCCTTT 3000 TCCACCGTAA GTTTTGTAGT CTCTTGGAAC CTGAGTGGCG TCTCACTCCT GCTCTTCAGT 3060 GTTTGTATGT GAAGCGAGAG AGATCAGTGT ATCTTTGTGT CTTGGGGAGG GGGGGGGAAA 3120 TATATTGTGG TTTTTTAAAG ATGCTTTTAT TTTAAATTTT GAGAATCTTT GTAATAAAAC 3180 GTACATTTCT ATG
3194Nucleotide Fasta Sequence
>ENSGALP00000005212.3|Class-I|Gallus gallus GGCCCCGGCCGGTGGGGCGGGTTGCGTTGCGCTGCGCGGCGGTAGGGTCTGCGGCCGTGGGGAGGCAGGAAAATGGCGCTGACGCAGGGGACCAAGCGGAAAGTCTGCTACTACTACGACGGTGATGTTGGAAACTATTACTATGGCCAGGGACACCCCATGAAGCCCCACAGGATCCGGATGACCCACAACCTACTGCTGAACTACGGCCTTTACAGGAAGATGGAGATATATCGCCCTCACAAGGCGAACGCGGAGGAGATGACCAAGTACCACAGTGATGACTACATCAAATTCCTGAGATCCATCCGCCCAGACAACATGTCTGAGTACAGCAAGCAGATGCAAAGATTTAACGTTGGGGAGGACTGCCCTGTGTTCGATGGGCTGTTTGAGTTCTGTCAGCTCTCTGCTGGAGGCTCCGTTGCCAGCGCTGTGAAGCTGAACAAGCAACAGACAGATATTGCTGTGAATTGGGCAGGAGGCCTTCACCACGCTAAGAAGTCGGAGGCTTCTGGCTTCTGTTATGTCAACGATATTGTCCTGGCTATCTTGGAGCTCTTAAAGTATCACCAGAGGGTCCTGTATATTGACATTGATATTCACCATGGAGATGGTGTGGAGGAAGCCTTCTATACCACAGACCGTGTGATGACCGTGTCCTTTCATAAGTATGGAGAGTACTTCCCAGGAACAGGGGACCTGCGGGACATTGGTGCAGGCAAAGGCAAATACTATGCTGTCAACTATCCCCTCCGGGATGGGATTGATGATGAGTCCTACGAGGCAATATTCAAGCCGGTGATATCTAAAGTGATGGAGACATTCCAGCCTAGTGCAGTTGTCCTGCAGTGCGGGTCGGATTCTCTGTCCGGGGACAGGCTGGGTTGTTTTAATCTGACCATCAAAGGTCATGCCAAGTGTGTGGAGTTTGTCAAAAGTTTTAATTTGCCTATGCTGATGCTGGGAGGAGGTGGCTATACGATCCGCAACGTGGCCAGATGCTGGACCTATGAGACTGCTGTGGCTTTGGACACTGAGATCCCAAATGAGCTCCCATATAATGACTATTTTGAGTACTTCGGACCAGACTTTAAGCTGCACATCAGTCCCTCAAACATGACCAACCAGAATACCAATGAGTATCTCGAGAAGATCAAGCAGCGTCTCTTTGAGAATCTGCGCATGCTGCCTCATGCCCCTGGCGTCCAGATGCAGCCAATTCCTGAGGATGCTGTTCAGGAAGACAGTGGAGATGAAGAAGAAGAAGATCCTGAGAAGCGCATTTCAATCCGCAATTCTGATAAGAGAATATCCTGTGATGAAGAATTCTCTGACTCTGAAGATGAAGGGGAAGGAGGGCGCAAAAATGTTGCCAACTTTAAGAAGGCCAAGCGTGTGAAAACAGAGGAGGAAAAGGAGGAGGAGGAGAAGAAGGATGAGAAAGAAGAGGAAAAAGCAAAAGAGGAGAAAGCCGAACCCAAGGGGGTGAAGGAAGAGACAAAATCCACCTAAGATGGCTGCAGCTGGACAGTACCTGTCAGTGCATAGTTATCGTAGGTTAGCTTCTCTGGTTGCCTCCCATTCCACAGGATTTATATTTTATATATGTTTCTGTATATATTTCTATATAAATATATAAATGACTTGAGAACTGTAAATTATTCCTTGCTGCACTCCGCTGGGAGCAGACAGGGAGGACTCTGCAGAGTAGAGAGACCCGCACTGCCCAGGATTGGTGCCTGGGAAGTTTCACTCTTTGCCTTCCACTGCCTCCTTAGTGTGTCTTTAAAAAGAATCACTTCCTTTCTTTGCTCTCCTCTGAAGTAACCACCCTTGAAAATGAATAATTTAAGTAGAAGTAGTGTCTGCATTTCAGGTTAGGTGGAAAGATGGCCATGAAACTTTTTTTTTTCTTCTTTTCCTTTCTCTTTTATTTTATTTTATTTTATCTTTTTTTGTGGGAGATATGAATTCCCAAATTAAGCCTGTGAGAGACTGAGTGTTCCTTTGGTCTTCAGTCTGATTCCACCATGGCAAGTAACTGCAAGCTGGTGCCGCTTCTCAGGGTCAAATAGTGCAGTTCTTGAACAGAGTTGGCTACCTTCCTGCAGCAAACTGGTGGAAAGAGATGAAGCAGCTTACAAGCAGATCAGAAAATCGCTCGAGTCAATCTGCCCAAGAGCCCTGCAGGTATAGATCTGGAAAATGCCAAGTGAAAATCACCCTGATGTGGTGGTGAACGTTTTCCAGGATGTGGCAGACCTCATTAGCGGGGCAGCGCTGTGCATCGCCCATAGGAGAAGGGATGGAATCTTTATGCACTTGTTTCCTATACCTGTGCCCCTCTTTGCAGGGAGGAGGTGAGTTACTGCCCATCTGGCTGCCTGCTTCACTCTGCTTCTGCCCACAGCTTCGTGTGCTGTAATTGCTTCTCAGTACTGATCTGTGTCCTTGCTGAAACCGTAGCAGAGCAGGACAGACAGACGGAGCCCAGCTGATGCCTCTGCTCCACGTGTCACTCGCTGAGAAACTCTTTCTGAAGCAGACATGTTTTCAAGTGGAACCTTTCCTGTCTTTGCTCTCAAGGCCAGTAAATGCGGAGAGCCTTTTTATCAGCAGTCTGAGCTGTTATCTGTACGAGGGAACAGCAGATGGGGCTCTGTACGTTTTTATAACTGCTCCTCTTCCTCCTCCCACACGTTATCTCACACCCAAAGGTCTTTTGTGATCAGAGCTGGCCTTTCTCACACCTTGCTTTGTACAGCTGAGCGTGAGATGAGCGCTCCGTGGGATGCTTTGCTGAGCTCCGACTTTGCAGAAGTTCTGCAGGCAGTTCTGACTCGCTGCTCTCCTTCCTCCGGGGGATTCCTCTGTCCATAAGAGGATCTGTACCTCCCCCGGGGTGCTGCTGGTGGTTTCAACTCTAATAATGCTGCTAACTTAACACAGGTTATTTTTAAAATGTTTTATTTTTTTAAATGCTTTTTTCCCCCCTTTTCCACCGTAAGTTTTGTAGTCTCTTGGAACCTGAGTGGCGTCTCACTCCTGCTCTTCAGTGTTTGTATGTGAAGCGAGAGAGATCAGTGTATCTTTGTGTCTTGGGGAGGGGGGGGGAAATATATTGTGGTTTTTTAAAGATGCTTTTATTTTAAATTTTGAGAATCTTTGTAATAAAACGTACATTTCTATG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |