WERAM Information

Tag Content
WERAM ID WERAM-Asm-0125
Ensembl Protein ID ENSAMXP00000012478.1
Gene Name hdac3 (1 to many)
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMXG00000012136.1 ENSAMXT00000012478.1 ENSAMXP00000012478.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.30e-57 196 16 201
Organism Astyanax mexicanus
Domain Profile
  HDAC Class-I
           class-1.txt 201 tGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpll 289
                            Gd+++vgae+g+yy++nvPl+dgidD+sy+++f++vi++v+++++P+++vlqcGaDsl +Drlg+fnlsi+gh+ecv+fvksf++pll
  ENSAMXP00000012478.1  16 LGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLL 104
                           59*************************************************************************************** PP
           class-1.txt 290 vlGGGGYtlrnvaRcwtyetavvl 313
                           vlGGGGYt+rnvaRcwtyet++++
  ENSAMXP00000012478.1 105 VLGGGGYTVRNVARCWTYETSLLV 128
                           *********************987 PP
           class-1.txt 227 Desyekifksviskv.ieafePeavvlqcGaDslagD 262
                            +++e+i ++v +++ +  + P++ + ++ +D l+ +
  ENSAMXP00000012478.1 165 RQYLEQIRQTVFENLkMLNHAPSVQIHDVPSDLLSYE 201
                           3455666666666652445666666666666666655 PP
Protein Sequence
(Fasta)		MYFISNIFLY VFNVVLGDMY EVGAESGRYY CLNVPLRDGI DDQSYRQLFQ PVIKQVVDFY 60
QPTCIVLQCG ADSLGCDRLG CFNLSIRGHG ECVEFVKSFK IPLLVLGGGG YTVRNVARCW 120
TYETSLLVDE SISDELPYSE YFEYFAPDFT LHPDVSTRIE NQNSRQYLEQ IRQTVFENLK 180
MLNHAPSVQI HDVPSDLLSY ERSDDADPDE RGSEENYSRP EAANEFYDGD HDNDKESDVE 240
I 241
Nucleotide Sequence
(Fasta)		GAATGGATCT GTAAGAGTGG ATGTATTTTA TTTCTAATAT ATTTCTGTAT GTTTTTAATG 60
TTGTTTTAGG TGACATGTAT GAGGTTGGAG CGGAGAGTGG GCGTTATTAC TGCCTGAATG 120
TTCCTCTGAG GGATGGGATA GATGACCAGA GCTACAGGCA GCTGTTCCAG CCTGTGATAA 180
AGCAGGTGGT CGACTTCTAT CAGCCCACCT GTATCGTGCT TCAGTGTGGA GCCGACTCGC 240
TGGGCTGTGA CAGACTCGGA TGCTTCAATC TCAGTATACG AGGTCACGGG GAGTGTGTGG 300
AGTTTGTGAA GAGTTTTAAG ATTCCTCTGC TGGTTCTGGG AGGAGGAGGG TACACTGTAC 360
GCAACGTGGC TCGATGTTGG ACGTACGAGA CGTCTTTGCT GGTTGATGAG TCCATTAGTG 420
ATGAGTTACC CTATAGTGAG TATTTTGAGT ATTTTGCTCC TGATTTCACA CTTCATCCTG 480
ACGTCAGCAC ACGGATCGAG AACCAGAACT CCAGACAGTA CCTGGAGCAG ATCCGTCAGA 540
CGGTGTTTGA GAATCTGAAG ATGCTGAATC ACGCTCCCAG CGTTCAGATC CACGACGTCC 600
CCTCAGACCT GCTGAGCTAC GAGCGCAGCG ACGACGCCGA TCCTGACGAG AGAGGATCTG 660
AGGAGAACTA CTCCAGGCCT GAGGCAGCGA ATGAGTTCTA TGACGGTGAT CACGATAACG 720
ATAAAGAGAG CGACGTGGAG ATCTGACCCC CCGGCGACCT CGTCTCCGAC GCTTCGTAAA 780
ATGACCCACT CTTTCTGTTC GCCTTTATTC TGAACTCACG CCGAGTACCC TCAATGTTTC 840
CTCATTTCAG AACATTTCTT GTTTATCGAT GTTCGTTTTT CTGTATTAAT TACTTTATTT 900
TGTATTGTTT TTGAGGTATA TGAAGTCTAT AATACTGTTT TTATTCTCTC ATCAATATTG 960
CCCTTTTTTC AAAACCTGAA CTCAGCTCAG ACCTGCAGTC GTTTACACAC ACATTACTGC 1020
AATATATACA GTAATATTAC AGCGCGTCCT AAAAATGATG AACTGATAAC GGCTCTGAAT 1080
CTCAACACTG ACGCTCGTTG ATGAATTCAG TGAACACTGC ATTTTTAGAA TAAATAAATG 1140
AACAGTTCGG TCATTGAAGA ATACTGCTTT ATGATTTATT ATTTGGTTAA CTGTGTTCAT 1200
ATTTTAATGT TGTTGTTTGT ACAGAATTTG TATGTGCATT TAATAAACAC TTGTTAATTC 1260
TCCTGGGCAC TGCACTTGTT TTATCTACAA CCGTCATTTA C 1302
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ten-0120 ENSTNIP00000013021.1 Tetraodon nigroviridis 94 4e-129 457
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 98 5e-129 457
WERAM-Orn-0192 ENSONIP00000019932.1 Oreochromis niloticus 96 9e-129 456
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 96 2e-128 455
WERAM-Orla-0093 ENSORLP00000011294.1 Oryzias latipes 96 2e-128 454
WERAM-Pof-0043 ENSPFOP00000003698.2 Poecilia formosa 95 1e-127 452
WERAM-Xim-0005 ENSXMAP00000000863.1 Xiphophorus maculatus 95 2e-127 451
WERAM-Gaa-0203 ENSGACP00000024795.1 Gasterosteus aculeatus 96 5e-127 450
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 93 2e-125 445
WERAM-Gaga-0024 ENSGALP00000004141.3 Gallus gallus 93 2e-125 445
WERAM-Gam-0015 ENSGMOP00000001496.1 Gadus morhua 93 3e-125 444
WERAM-Anp-0042 ENSAPLP00000004660.1 Anas platyrhynchos 93 7e-125 443
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 92 1e-124 442
WERAM-Anc-0124 ENSACAP00000011701.2 Anolis carolinensis 92 1e-124 442
WERAM-Pes-0041 ENSPSIP00000006305.1 Pelodiscus sinensis 92 1e-124 442
WERAM-Fia-0044 ENSFALP00000003005.1 Ficedula albicollis 93 1e-124 442
WERAM-Tag-0179 ENSTGUP00000015405.1 Taeniopygia guttata 93 2e-124 442
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 92 4e-124 441
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 92 7e-124 440
WERAM-Ran-0128 ENSRNOP00000071791.1 Rattus norvegicus 92 8e-124 439
WERAM-Ptv-0171 ENSPVAP00000014750.1 Pteropus vampyrus 92 1e-123 439
WERAM-Nol-0100 ENSNLEP00000011707.1 Nomascus leucogenys 92 1e-123 439
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 92 1e-123 439
WERAM-Tas-0075 ENSTSYP00000007464.1 Tarsius syrichta 92 1e-123 439
WERAM-Fec-0077 ENSFCAP00000006409.3 Felis catus 92 1e-123 439
WERAM-Mum-0059 ENSMUSP00000037981.7 Mus musculus 92 1e-123 439
WERAM-Sus-0109 ENSSSCP00000015310.2 Sus scrofa 92 1e-123 439
WERAM-Poa-0142 ENSPPYP00000017772.1 Pongo abelii 92 1e-123 439
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 92 1e-123 439
WERAM-Pat-0142 ENSPTRP00000029652.3 Pan troglodytes 92 1e-123 439
WERAM-Orc-0086 ENSOCUP00000007738.2 Oryctolagus cuniculus 92 1e-123 439
WERAM-Ocp-0150 ENSOPRP00000015465.1 Ochotona princeps 92 1e-123 439
WERAM-Myl-0096 ENSMLUP00000007910.2 Myotis lucifugus 92 1e-123 439
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 92 1e-123 439
WERAM-Hos-0198 ENSP00000302967.3 Homo sapiens 92 1e-123 439
WERAM-Gog-0182 ENSGGOP00000015976.2 Gorilla gorilla 92 1e-123 439
WERAM-Cap-0155 ENSCPOP00000012861.2 Cavia porcellus 92 1e-123 439
WERAM-Caf-0075 ENSCAFP00000030390.2 Canis familiaris 92 1e-123 439
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 92 1e-123 439
WERAM-Aim-0114 ENSAMEP00000011012.1 Ailuropoda melanoleuca 92 1e-123 439
WERAM-Otg-0013 ENSOGAP00000000543.2 Otolemur garnettii 92 2e-123 439
WERAM-Mup-0085 ENSMPUP00000008127.1 Mustela putorius furo 91 2e-123 438
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 91 3e-123 437
WERAM-Ova-0007 ENSOARP00000000868.1 Ovis aries 91 3e-123 437
WERAM-Chh-0070 ENSCHOP00000007333.1 Choloepus hoffmanni 92 4e-123 437
WERAM-Mam-0105 ENSMMUP00000016525.1 Macaca mulatta 92 4e-123 437
WERAM-Tub-0054 ENSTBEP00000006507.1 Tupaia belangeri 92 4e-123 437
WERAM-Dan-0065 ENSDNOP00000006447.2 Dasypus novemcinctus 91 2e-122 435
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 89 2e-120 428
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 83 1e-112 402
WERAM-Tar-0077 ENSTRUP00000015206.1 Takifugu rubripes 96 1e-110 396
WERAM-Ere-0061 ENSEEUP00000005213.1 Erinaceus europaeus 84 6e-110 393
WERAM-Ect-0119 ENSETEP00000013986.1 Echinops telfairi 91 2e-109 392
WERAM-Tut-0154 ENSTTRP00000013027.1 Tursiops truncatus 82 2e-106 382
WERAM-Mim-0152 ENSMICP00000015894.1 Microcebus murinus 90 3e-106 381
WERAM-Cii-0013 ENSCINP00000004801.3 Ciona intestinalis 68 3e-91 332
WERAM-Prc-0116 ENSPCAP00000010084.1 Procavia capensis 72 3e-89 325
WERAM-Vip-0019 ENSVPAP00000001720.1 Vicugna pacos 72 1e-88 323
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 66 8e-86 313
WERAM-Loa-0085 ENSLAFP00000006680.3 Loxodonta africana 95 5e-83 304
WERAM-Drm-0025 FBpp0078414 Drosophila melanogaster 61 8e-81 297
WERAM-Bot-0156 ENSBTAP00000023086.5 Bos taurus 86 1e-79 293
WERAM-Soa-0041 ENSSARP00000003871.1 Sorex araneus 62 4e-71 264
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 60 1e-68 256
WERAM-Ora-0012 ENSOANP00000001904.1 Ornithorhynchus anatinus 60 1e-66 249
WERAM-Sem-0137 EFJ33452 Selaginella moellendorffii 53 1e-65 246
WERAM-Coi-0024 EAS33504 Coccidioides immitis 57 8e-65 243
WERAM-Met-0097 AES88434 Medicago truncatula 52 2e-64 243
WERAM-Glm-0143 GLYMA12G09190.1 Glycine max 53 3e-64 241
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 53 8e-64 240
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 56 2e-63 239
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 56 2e-63 239
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 51 3e-63 238
WERAM-Mua-0048 GSMUA_Achr2P19590_001 Musa acuminata 52 4e-63 238
WERAM-Tra-0287 Traes_7AL_A04AC8D84.2 Triticum aestivum 54 5e-63 238
WERAM-Tru-0006 TRIUR3_03674-P1 Triticum urartu 49 5e-63 238
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 51 6e-63 237
WERAM-Thc-0114 EOY33523 Theobroma cacao 51 9e-63 237
WERAM-Orm-0045 OMERI04G10320.1 Oryza meridionalis 52 1e-62 236
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 51 1e-62 236
WERAM-Php-0035 PP1S180_68V6.1 Physcomitrella patens 57 2e-62 236
WERAM-Caa-0015 KGT70099 Candida albicans 55 2e-62 236
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 57 2e-62 236
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 52 2e-62 235
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 56 2e-62 235
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 53 2e-62 235
WERAM-Amt-0048 ERN13133 Amborella trichopoda 51 3e-62 235
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 51 3e-62 235
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 51 3e-62 235
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 51 3e-62 235
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 52 3e-62 235
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 51 4e-62 234
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 55 4e-62 234
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 54 6e-62 234
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 51 8e-62 234
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 54 2e-61 233
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 54 2e-61 233
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 58 2e-61 232
WERAM-Sei-0051 Si013709m Setaria italica 48 3e-61 231
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 48 4e-61 231
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 53 4e-61 231
WERAM-Prp-0063 EMJ06433 Prunus persica 52 6e-61 231
WERAM-Scj-0027 EEB08472 Schizosaccharomyces japonicus 54 7e-61 230
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 53 8e-61 230
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 52 1e-60 230
WERAM-Kop-0004 CAY67954 Komagataella pastoris 50 1e-60 230
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 55 1e-60 229
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 52 2e-60 229
WERAM-Ved-0020 EGY15146 Verticillium dahliae 56 2e-60 229
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 51 3e-60 228
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 53 5e-60 228
WERAM-Aet-0101 EMT12816 Aegilops tauschii 55 8e-60 227
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 52 8e-60 227
Created Date 25-Jun-2016