| Tag |
Content |
| WERAM ID |
WERAM-Brd-0068 |
| Ensembl Protein ID |
BRADI3G08060.1 |
| Gene Name |
BRADI3G08060.1 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.20e-164 |
547.9 |
23 |
333 |
|
| Organism |
Brachypodium distachyon |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf 95
++v+y+yd++vg+y+ygq+hpmkp+r+++th+L+ +ygl ++++++p+ a+ ++l++fh+++yi+fl++v+pe++++ ++ lk+fnvgedcPvf
BRADI3G08060.1 23 RRVCYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLAQYGLLDQMQVLRPHPARDRDLCRFHADDYISFLRSVTPETQQDQIRALKRFNVGEDCPVF 117
589******************************************************************************************** PP
class-1.txt 96 dglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsf 190
dgl+++cq+++Gas+ +a kLn++ diainw+GGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsf
BRADI3G08060.1 118 DGLYSFCQTYAGASVGSAVKLNRG-HDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSF 211
*********************997.59******************************************************************** PP
class-1.txt 191 hkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfn 285
hk+g+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecvk+++sfn
BRADI3G08060.1 212 HKFGD-YFPGTGDVRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMAKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN 305
*****.***************************************************************************************** PP
class-1.txt 286 lpllvlGGGGYtlrnvaRcwtyetavvl 313
+pll+lGGGGYt+rnvaRcw+yet+v+l
BRADI3G08060.1 306 VPLLLLGGGGYTIRNVARCWCYETGVAL 333
*************************986 PP
|
Protein Sequence
(Fasta) | MDLSSAGSGG NSLPSVGPDG QKRRVCYFYD PEVGNYYYGQ GHPMKPHRIR MTHSLLAQYG 60
LLDQMQVLRP HPARDRDLCR FHADDYISFL RSVTPETQQD QIRALKRFNV GEDCPVFDGL 120
YSFCQTYAGA SVGSAVKLNR GHDIAINWSG GLHHAKKCEA SGFCYVNDIV LAILELLKHH 180
QRVLYVDIDI HHGDGVEEAF YTTDRVMTVS FHKFGDYFPG TGDVRDIGHS KGKYYSLNVP 240
LDDGIDDESY QSLFKPIMAK VMEVFRPGAV VLQCGADSLS GDRLGCFNLS IRGHAECVKY 300
MRSFNVPLLL LGGGGYTIRN VARCWCYETG VALGQELEDK MPINEYYEYF GPDYTLHVAP 360
SNMENKNTHH QLDDIRSKLL DNLSKLQHAP SVQFQERPPD TELPEADEDQ EDQDERHDPD 420
SDMELDYHTS LEDPARRSNI QGTRVKREFA GTETKDQDGN RVTAEHRGPE PMAEDIGPSK 480
QVPPVDANAM AVDEPGNVKT EPGSSTKLPD PSAVYQKP 518Protein Fasta Sequence
>BRADI3G08060.1|Class-I|Brachypodium distachyon
MDLSSAGSGGNSLPSVGPDGQKRRVCYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLAQYGLLDQMQVLRPHPARDRDLCRFHADDYISFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGASVGSAVKLNRGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMAKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQELEDKMPINEYYEYFGPDYTLHVAPSNMENKNTHHQLDDIRSKLLDNLSKLQHAPSVQFQERPPDTELPEADEDQEDQDERHDPDSDMELDYHTSLEDPARRSNIQGTRVKREFAGTETKDQDGNRVTAEHRGPEPMAEDIGPSKQVPPVDANAMAVDEPGNVKTEPGSSTKLPDPSAVYQKP |
Nucleotide Sequence
(Fasta) | ATGGACCTCT CCTCGGCCGG CTCCGGCGGC AACTCGCTGC CGTCGGTCGG CCCCGACGGG 60
CAGAAGCGGC GGGTGTGCTA CTTCTACGAC CCGGAGGTGG GCAACTACTA CTACGGGCAG 120
GGGCACCCGA TGAAGCCGCA CCGCATCCGC ATGACGCACT CGCTGCTGGC CCAGTACGGC 180
CTCCTCGACC AGATGCAGGT GCTGCGGCCG CACCCTGCCC GCGACCGCGA CCTCTGCCGC 240
TTCCACGCCG ACGACTACAT CTCCTTCCTC CGCTCCGTCA CGCCCGAGAC GCAACAGGAC 300
CAGATCCGGG CCCTCAAGCG CTTCAACGTC GGCGAGGACT GCCCCGTCTT CGACGGCCTC 360
TACAGCTTCT GCCAGACCTA CGCGGGGGCC TCCGTCGGCA GCGCCGTCAA GCTCAACCGC 420
GGCCACGACA TCGCCATCAA CTGGTCAGGG GGCCTGCACC ACGCGAAGAA GTGCGAGGCG 480
TCCGGGTTCT GCTACGTCAA CGACATCGTC CTCGCCATCC TCGAGCTACT CAAGCATCAC 540
CAGCGGGTTC TATATGTTGA TATTGATATT CACCATGGGG ATGGAGTTGA GGAGGCGTTC 600
TACACAACTG ATAGGGTCAT GACAGTTTCA TTCCACAAGT TTGGGGATTA TTTCCCTGGC 660
ACAGGGGATG TCCGTGATAT TGGCCATTCA AAGGGGAAGT ATTACTCCCT GAATGTTCCT 720
CTGGACGATG GGATTGATGA CGAAAGCTAC CAGTCCCTGT TTAAGCCAAT AATGGCCAAA 780
GTTATGGAGG TTTTCCGCCC TGGTGCAGTT GTGCTTCAGT GTGGTGCTGA TTCGTTATCT 840
GGTGATAGGT TGGGTTGCTT CAACCTTTCA ATCAGAGGTC ATGCAGAATG TGTGAAGTAC 900
ATGAGGTCTT TCAACGTTCC ATTGTTGCTT CTTGGCGGTG GTGGATATAC CATAAGAAAT 960
GTTGCACGTT GTTGGTGTTA TGAGACAGGA GTTGCACTAG GTCAAGAGCT TGAGGATAAA 1020
ATGCCTATAA ATGAGTACTA CGAATACTTT GGTCCAGATT ACACTCTTCA TGTTGCACCA 1080
AGTAACATGG AGAACAAAAA TACACACCAT CAACTGGATG ATATAAGGAG CAAACTTCTT 1140
GATAATCTTT CAAAACTTCA ACATGCTCCT AGTGTCCAAT TTCAAGAGCG GCCTCCTGAT 1200
ACAGAGTTAC CTGAGGCGGA TGAAGATCAA GAGGATCAGG ATGAAAGGCA TGACCCTGAT 1260
TCTGATATGG AATTGGATTA TCACACATCT TTGGAAGACC CAGCAAGGAG GAGCAATATT 1320
CAAGGTACAA GAGTTAAGAG AGAATTTGCT GGAACAGAAA CCAAAGATCA GGATGGTAAC 1380
AGAGTAACAG CTGAACATAG AGGACCAGAA CCAATGGCAG AGGACATTGG TCCCTCGAAG 1440
CAAGTCCCTC CGGTCGATGC AAATGCGATG GCTGTGGATG AGCCAGGAAA TGTCAAGACA 1500
GAACCAGGGA GCTCTACCAA ATTGCCAGAC CCATCGGCTG TTTATCAGAA GCCATGACTG 1560
CAGTGTTTTG ACCGCCAGGT TCCTGGCACA AAGTTTCATG CATGTTTTGA CAGTCAAAAA 1620
CCGAAGTGAA TCAGTGAAAG CATTTTAGAT TTAACCAGTG CTCTACCCAT CTGTTTCTTG 1680
TGTGGAAATG GTGGTAGACA ATGCTTTGTG GTGGAGACAA CAGTCTGACC CAATGTATAC 1740
ATGTAGCATG GATTGAGCTG TAATGTATAG TTAGCCTATA GTCAACTAAA TGGACTGTGG 1800
GGCTAAATTC CTCCAATTGT TCTTGCGGAT TTTTGAGGAG GTTAAACTAT TGAAAGATCT 1860
TAGCCATTAA CTGCAAAGTG GCTCGTTCTC TAATACTCCG TACCTAGAAC TATATTCCTA 1920
AGAATTGTGT TCAAATTGAC ATAATTTATA ATGATTCTAA GCATT
1966Nucleotide Fasta Sequence
>BRADI3G08060.1|Class-I|Brachypodium distachyon
ATGGACCTCTCCTCGGCCGGCTCCGGCGGCAACTCGCTGCCGTCGGTCGGCCCCGACGGGCAGAAGCGGCGGGTGTGCTACTTCTACGACCCGGAGGTGGGCAACTACTACTACGGGCAGGGGCACCCGATGAAGCCGCACCGCATCCGCATGACGCACTCGCTGCTGGCCCAGTACGGCCTCCTCGACCAGATGCAGGTGCTGCGGCCGCACCCTGCCCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACATCTCCTTCCTCCGCTCCGTCACGCCCGAGACGCAACAGGACCAGATCCGGGCCCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCGGGGGCCTCCGTCGGCAGCGCCGTCAAGCTCAACCGCGGCCACGACATCGCCATCAACTGGTCAGGGGGCCTGCACCACGCGAAGAAGTGCGAGGCGTCCGGGTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTACTCAAGCATCACCAGCGGGTTCTATATGTTGATATTGATATTCACCATGGGGATGGAGTTGAGGAGGCGTTCTACACAACTGATAGGGTCATGACAGTTTCATTCCACAAGTTTGGGGATTATTTCCCTGGCACAGGGGATGTCCGTGATATTGGCCATTCAAAGGGGAAGTATTACTCCCTGAATGTTCCTCTGGACGATGGGATTGATGACGAAAGCTACCAGTCCCTGTTTAAGCCAATAATGGCCAAAGTTATGGAGGTTTTCCGCCCTGGTGCAGTTGTGCTTCAGTGTGGTGCTGATTCGTTATCTGGTGATAGGTTGGGTTGCTTCAACCTTTCAATCAGAGGTCATGCAGAATGTGTGAAGTACATGAGGTCTTTCAACGTTCCATTGTTGCTTCTTGGCGGTGGTGGATATACCATAAGAAATGTTGCACGTTGTTGGTGTTATGAGACAGGAGTTGCACTAGGTCAAGAGCTTGAGGATAAAATGCCTATAAATGAGTACTACGAATACTTTGGTCCAGATTACACTCTTCATGTTGCACCAAGTAACATGGAGAACAAAAATACACACCATCAACTGGATGATATAAGGAGCAAACTTCTTGATAATCTTTCAAAACTTCAACATGCTCCTAGTGTCCAATTTCAAGAGCGGCCTCCTGATACAGAGTTACCTGAGGCGGATGAAGATCAAGAGGATCAGGATGAAAGGCATGACCCTGATTCTGATATGGAATTGGATTATCACACATCTTTGGAAGACCCAGCAAGGAGGAGCAATATTCAAGGTACAAGAGTTAAGAGAGAATTTGCTGGAACAGAAACCAAAGATCAGGATGGTAACAGAGTAACAGCTGAACATAGAGGACCAGAACCAATGGCAGAGGACATTGGTCCCTCGAAGCAAGTCCCTCCGGTCGATGCAAATGCGATGGCTGTGGATGAGCCAGGAAATGTCAAGACAGAACCAGGGAGCTCTACCAAATTGCCAGACCCATCGGCTGTTTATCAGAAGCCATGACTGCAGTGTTTTGACCGCCAGGTTCCTGGCACAAAGTTTCATGCATGTTTTGACAGTCAAAAACCGAAGTGAATCAGTGAAAGCATTTTAGATTTAACCAGTGCTCTACCCATCTGTTTCTTGTGTGGAAATGGTGGTAGACAATGCTTTGTGGTGGAGACAACAGTCTGACCCAATGTATACATGTAGCATGGATTGAGCTGTAATGTATAGTTAGCCTATAGTCAACTAAATGGACTGTGGGGCTAAATTCCTCCAATTGTTCTTGCGGATTTTTGAGGAGGTTAAACTATTGAAAGATCTTAGCCATTAACTGCAAAGTGGCTCGTTCTCTAATACTCCGTACCTAGAACTATATTCCTAAGAATTGTGTTCAAATTGACATAATTTATAATGATTCTAAGCATT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
