| Tag |
Content |
| WERAM ID |
WERAM-Ori-0130 |
| Ensembl Protein ID |
BGIOSGA038718-PA |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.70e-164 |
547.2 |
22 |
332 |
|
| Organism |
Oryza indica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcP 93
++v+y+yd +vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y+ fl++v+pe++++ ++ lk+fnvgedcP
BGIOSGA038718-PA 22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCP 114
589****************************************************************************************** PP
class-1.txt 94 vfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvm 186
vfdgl+++cq+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvm
BGIOSGA038718-PA 115 VFDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVM 206
***********************997.59**************************************************************** PP
class-1.txt 187 tvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvk 279
tvsfhk+g+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecv+
BGIOSGA038718-PA 207 TVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVR 298
*********.*********************************************************************************** PP
class-1.txt 280 fvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
f++sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
BGIOSGA038718-PA 299 FMRSFNVPLLLLGGGGYTIRNVARCWCYETGVAL 332
*******************************986 PP
|
Protein Sequence
(Fasta) | MDASAGGGGN SLPTAGADGA KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLAHYGL 60
LDQMQVLKPH PARDRDLCRF HADDYVAFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120
SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180
RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDIGHSK GKYYSLNVPL 240
DDGIDDESYQ SLFKPIMGKV MEVFRPGAVV LQCGADSLSG DRLGCFNLSI RGHAECVRFM 300
RSFNVPLLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PPNEYFEYFG PDYTLHVAPS 360
NMENKNTRQQ LDDIRSRLLD NLSKLRHAPS QDEDQEDPDE RHHADSDVEM DDVKPLDDSG 420
RRSSIQNVRV KRESAETDAA DQVCKQLYFL S 451Protein Fasta Sequence
>BGIOSGA038718-PA|Class-I|Oryza indica
MDASAGGGGNSLPTAGADGAKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHVAPSNMENKNTRQQLDDIRSRLLDNLSKLRHAPSQDEDQEDPDERHHADSDVEMDDVKPLDDSGRRSSIQNVRVKRESAETDAADQVCKQLYFLS |
Nucleotide Sequence
(Fasta) | ATGGACGCCT CCGCCGGAGG CGGGGGGAAC TCGCTGCCGA CGGCGGGGGC CGACGGGGCC 60
AAGCGGCGGG TGTGCTACTT CTACGACGCG GAGGTGGGGA ACTACTACTA CGGGCAGGGG 120
CACCCGATGA AGCCGCACCG CATCCGGATG ACCCACGCGC TGCTCGCCCA CTACGGCCTC 180
CTCGACCAGA TGCAGGTGCT CAAGCCCCAC CCGGCGCGCG ACCGCGACCT CTGCCGCTTC 240
CACGCCGACG ACTACGTCGC CTTCCTCCGC TCCGTCACGC CGGAGACCCA GCAGGACCAG 300
ATCCGGGCGC TCAAGCGCTT CAACGTCGGC GAGGACTGCC CCGTCTTCGA CGGCCTCTAC 360
AGCTTCTGCC AGACCTACGC CGGGGGATCC GTCGGCGGCG CCGTCAAGCT CAACCACGGC 420
CACGACATCG CCATCAACTG GGCCGGCGGC CTCCACCACG CCAAGAAGTG CGAGGCCTCG 480
GGATTCTGCT ACGTCAACGA CATCGTCCTC GCCATCCTCG AGCTCCTCAA ATACCACCAG 540
CGTGTTCTCT ATGTGGATAT CGATATCCAC CATGGGGATG GTGTGGAGGA GGCGTTCTAC 600
ACGACGGACA GGGTGATGAC GGTCTCGTTC CACAAGTTTG GGGATTATTT CCCGGGGACC 660
GGGGACATTC GCGATATTGG GCACTCAAAG GGGAAGTATT ACTCTCTGAA TGTCCCGTTG 720
GACGACGGTA TCGACGACGA GAGCTACCAG TCGTTGTTCA AGCCGATCAT GGGGAAGGTG 780
ATGGAGGTTT TTCGCCCTGG CGCGGTGGTG CTCCAGTGCG GTGCGGACTC TCTGTCGGGT 840
GATAGGTTGG GTTGCTTCAA CCTGTCAATC AGGGGCCACG CGGAATGCGT GAGATTCATG 900
AGGTCCTTCA ATGTCCCGCT GTTGCTGCTT GGTGGTGGTG GGTATACCAT AAGAAATGTT 960
GCGCGGTGTT GGTGCTATGA GACAGGAGTT GCACTTGGTC ATGAGCTCAC TGACAAGATG 1020
CCTCCAAATG AGTATTTTGA GTACTTTGGT CCAGATTATA CACTTCATGT TGCACCAAGT 1080
AACATGGAGA ACAAAAACAC ACGCCAGCAG TTGGATGATA TAAGATCAAG ACTTCTTGAT 1140
AATCTTTCAA AACTTCGACA TGCTCCTAGC CAAGATGAAG ACCAAGAGGA TCCTGATGAA 1200
AGGCACCATG CTGATTCTGA TGTGGAAATG GATGATGTCA AACCTTTGGA TGACTCAGGA 1260
AGGAGGAGCA GTATTCAGAA TGTGAGAGTT AAGAGAGAGT CTGCTGAAAC AGATGCCGCA 1320
GATCAGGTGT GTAAGCAGCT ATACTTTCTT TCATGA
1357Nucleotide Fasta Sequence
>BGIOSGA038718-PA|Class-I|Oryza indica
ATGGACGCCTCCGCCGGAGGCGGGGGGAACTCGCTGCCGACGGCGGGGGCCGACGGGGCCAAGCGGCGGGTGTGCTACTTCTACGACGCGGAGGTGGGGAACTACTACTACGGGCAGGGGCACCCGATGAAGCCGCACCGCATCCGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGACCAGATGCAGGTGCTCAAGCCCCACCCGGCGCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACGTCGCCTTCCTCCGCTCCGTCACGCCGGAGACCCAGCAGGACCAGATCCGGGCGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCCGGGGGATCCGTCGGCGGCGCCGTCAAGCTCAACCACGGCCACGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAGAAGTGCGAGGCCTCGGGATTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAATACCACCAGCGTGTTCTCTATGTGGATATCGATATCCACCATGGGGATGGTGTGGAGGAGGCGTTCTACACGACGGACAGGGTGATGACGGTCTCGTTCCACAAGTTTGGGGATTATTTCCCGGGGACCGGGGACATTCGCGATATTGGGCACTCAAAGGGGAAGTATTACTCTCTGAATGTCCCGTTGGACGACGGTATCGACGACGAGAGCTACCAGTCGTTGTTCAAGCCGATCATGGGGAAGGTGATGGAGGTTTTTCGCCCTGGCGCGGTGGTGCTCCAGTGCGGTGCGGACTCTCTGTCGGGTGATAGGTTGGGTTGCTTCAACCTGTCAATCAGGGGCCACGCGGAATGCGTGAGATTCATGAGGTCCTTCAATGTCCCGCTGTTGCTGCTTGGTGGTGGTGGGTATACCATAAGAAATGTTGCGCGGTGTTGGTGCTATGAGACAGGAGTTGCACTTGGTCATGAGCTCACTGACAAGATGCCTCCAAATGAGTATTTTGAGTACTTTGGTCCAGATTATACACTTCATGTTGCACCAAGTAACATGGAGAACAAAAACACACGCCAGCAGTTGGATGATATAAGATCAAGACTTCTTGATAATCTTTCAAAACTTCGACATGCTCCTAGCCAAGATGAAGACCAAGAGGATCCTGATGAAAGGCACCATGCTGATTCTGATGTGGAAATGGATGATGTCAAACCTTTGGATGACTCAGGAAGGAGGAGCAGTATTCAGAATGTGAGAGTTAAGAGAGAGTCTGCTGAAACAGATGCCGCAGATCAGGTGTGTAAGCAGCTATACTTTCTTTCATGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
