| Tag |
Content |
| WERAM ID |
WERAM-Ori-0005 |
| Ensembl Protein ID |
BGIOSGA001330-PA |
| Gene Name |
OsI_02609 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.60e-121 |
406.7 |
20 |
341 |
|
| Organism |
Oryza indica |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae......elskelkkfn 87
++v+y+yd+ ++++ yg++h+m+p+r++++h+Lv +yg+ +++++++ a+a+el+ fh e y+ +l+ +p+ ++++ ++
BGIOSGA001330-PA 20 RRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMHRLRTAPATAAELADFHDEGYLALLQDLTPDGCGgddgvgDMARARGIYA 112
589**********************************************************************99877777876777777788 PP
class-1.txt 88 vge.......dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGD 173
v+ d Pvfd l++yc ++G+sl+aa+ L +++adiainw+GG+hha + a GfcyvnDivlai ell +++rvly+did+hhGD
BGIOSGA001330-PA 113 VEGkgggrgvDNPVFDRLWDYCLRYSGGSLAAARALGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGD 205
86444455559********************************************************************************** PP
class-1.txt 174 gveeafyttdrvmtvsfhkygeeffPgtGdlsdvga.ekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
gv+ af++++rvmtvsfh++g +ffPg+G + dvg+ + g+y a+nvP++ gi De+y+++f++++ +v+e+f+PeavvlqcGaDslagDrlg
BGIOSGA001330-PA 206 GVQAAFEASNRVMTVSFHQHGGGFFPGSGAVADVGKkGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLG 298
**********************************97268****************************************************** PP
class-1.txt 266 efnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtye 308
e nl+++gha+cv+f++sfnlpll+lGGGGYt++ va cw+ e
BGIOSGA001330-PA 299 ELNLTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNE 341
****************************************976 PP
|
Protein Sequence
(Fasta) | MAGGGGNSLP SPSCGDDKKR RVCYYYDPGI STVDYGEGHV MVPHRVTMAH NLVAAYGMLG 60
DMHRLRTAPA TAAELADFHD EGYLALLQDL TPDGCGGDDG VGDMARARGI YAVEGKGGGR 120
GVDNPVFDRL WDYCLRYSGG SLAAARALGS GTADIAINWS GGMHHACRGG ARGFCYVNDI 180
VLAIRELLAH FRRVLYVDID VHHGDGVQAA FEASNRVMTV SFHQHGGGFF PGSGAVADVG 240
KKGPGRYCAL NVPVSVGIGD EEYHRLFEPI MARVMEVFQP EAVVLQCGAD SLAGDRLGEL 300
NLTTRGHAQC VSFIRSFNLP LLLLGGGGYT INHVASCWCN EFEERRHRSI NVGDLYYDPR 360
EQEEEEESPT ARLHRKLYFE PTGDQESLYT KHRCNVQPGE SSSRKQRKLK Protein Fasta Sequence
>BGIOSGA001330-PA|Class-I|Oryza indica
MAGGGGNSLPSPSCGDDKKRRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMHRLRTAPATAAELADFHDEGYLALLQDLTPDGCGGDDGVGDMARARGIYAVEGKGGGRGVDNPVFDRLWDYCLRYSGGSLAAARALGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVDIDVHHGDGVQAAFEASNRVMTVSFHQHGGGFFPGSGAVADVGKKGPGRYCALNVPVSVGIGDEEYHRLFEPIMARVMEVFQPEAVVLQCGADSLAGDRLGELNLTTRGHAQCVSFIRSFNLPLLLLGGGGYTINHVASCWCNEFEERRHRSINVGDLYYDPREQEEEEESPTARLHRKLYFEPTGDQESLYTKHRCNVQPGESSSRKQRKLK |
Nucleotide Sequence
(Fasta) | ATGGCCGGCG GCGGCGGCAA TTCGCTGCCT TCGCCGTCGT GCGGCGACGA CAAGAAGCGG 60
CGGGTGTGCT ACTACTACGA CCCGGGGATC TCCACCGTCG ACTACGGCGA GGGCCACGTC 120
ATGGTGCCGC ACCGCGTCAC CATGGCGCAC AACCTCGTCG CCGCCTACGG CATGCTCGGC 180
GACATGCACC GCCTCCGCAC GGCGCCCGCC ACGGCGGCGG AGCTCGCCGA CTTCCACGAC 240
GAGGGCTACC TCGCCCTCCT CCAGGACCTC ACCCCGGACG GCTGCGGAGG CGACGACGGG 300
GTCGGCGACA TGGCGCGCGC CAGGGGCATC TACGCCGTCG AGGGCAAGGG CGGCGGCCGC 360
GGCGTCGACA ACCCGGTGTT CGACCGCCTC TGGGATTACT GCCTCCGCTA CTCCGGCGGG 420
TCGCTCGCCG CGGCGCGCGC CCTCGGGAGC GGCACCGCGG ACATCGCCAT CAACTGGTCG 480
GGCGGGATGC ACCACGCGTG CCGCGGCGGC GCGAGGGGCT TCTGCTACGT GAACGACATC 540
GTGCTCGCCA TCCGCGAGCT GCTCGCCCAC TTCCGCCGCG TGCTCTACGT GGACATCGAC 600
GTCCACCACG GCGACGGCGT CCAGGCCGCC TTCGAGGCGT CGAACCGGGT GATGACGGTG 660
TCGTTCCACC AGCACGGCGG TGGCTTCTTC CCGGGCTCCG GCGCCGTCGC CGACGTCGGC 720
AAGAAGGGCC CCGGCCGCTA CTGCGCGCTG AACGTGCCGG TGAGCGTGGG CATCGGCGAC 780
GAGGAGTACC ACCGGCTGTT CGAGCCGATC ATGGCGAGGG TGATGGAGGT GTTCCAGCCG 840
GAGGCCGTCG TGCTGCAGTG CGGCGCCGAC TCCCTCGCCG GCGACCGGCT CGGCGAGCTG 900
AACCTGACCA CGCGCGGCCA CGCCCAGTGC GTCAGCTTCA TCCGCAGCTT CAACCTGCCG 960
CTCCTCCTCC TCGGCGGCGG CGGCTACACC ATCAACCACG TCGCCTCCTG CTGGTGCAAT 1020
GAGTTCGAGG AGCGCCGCCA CCGGAGCATC AACGTCGGCG ACCTCTACTA CGACCCACGC 1080
GAGCAGGAAG AGGAAGAGGA GAGCCCCACG GCGAGGCTGC ACCGGAAGCT CTACTTCGAG 1140
CCCACCGGAG ATCAGGAGAG CCTCTACACT AAGCACAGGT GCAACGTGCA GCCAGGGGAG 1200
TCGAGTAGTA GAAAGCAGCG TAAGCTAAAG TGA
1234Nucleotide Fasta Sequence
>BGIOSGA001330-PA|Class-I|Oryza indica
ATGGCCGGCGGCGGCGGCAATTCGCTGCCTTCGCCGTCGTGCGGCGACGACAAGAAGCGGCGGGTGTGCTACTACTACGACCCGGGGATCTCCACCGTCGACTACGGCGAGGGCCACGTCATGGTGCCGCACCGCGTCACCATGGCGCACAACCTCGTCGCCGCCTACGGCATGCTCGGCGACATGCACCGCCTCCGCACGGCGCCCGCCACGGCGGCGGAGCTCGCCGACTTCCACGACGAGGGCTACCTCGCCCTCCTCCAGGACCTCACCCCGGACGGCTGCGGAGGCGACGACGGGGTCGGCGACATGGCGCGCGCCAGGGGCATCTACGCCGTCGAGGGCAAGGGCGGCGGCCGCGGCGTCGACAACCCGGTGTTCGACCGCCTCTGGGATTACTGCCTCCGCTACTCCGGCGGGTCGCTCGCCGCGGCGCGCGCCCTCGGGAGCGGCACCGCGGACATCGCCATCAACTGGTCGGGCGGGATGCACCACGCGTGCCGCGGCGGCGCGAGGGGCTTCTGCTACGTGAACGACATCGTGCTCGCCATCCGCGAGCTGCTCGCCCACTTCCGCCGCGTGCTCTACGTGGACATCGACGTCCACCACGGCGACGGCGTCCAGGCCGCCTTCGAGGCGTCGAACCGGGTGATGACGGTGTCGTTCCACCAGCACGGCGGTGGCTTCTTCCCGGGCTCCGGCGCCGTCGCCGACGTCGGCAAGAAGGGCCCCGGCCGCTACTGCGCGCTGAACGTGCCGGTGAGCGTGGGCATCGGCGACGAGGAGTACCACCGGCTGTTCGAGCCGATCATGGCGAGGGTGATGGAGGTGTTCCAGCCGGAGGCCGTCGTGCTGCAGTGCGGCGCCGACTCCCTCGCCGGCGACCGGCTCGGCGAGCTGAACCTGACCACGCGCGGCCACGCCCAGTGCGTCAGCTTCATCCGCAGCTTCAACCTGCCGCTCCTCCTCCTCGGCGGCGGCGGCTACACCATCAACCACGTCGCCTCCTGCTGGTGCAATGAGTTCGAGGAGCGCCGCCACCGGAGCATCAACGTCGGCGACCTCTACTACGACCCACGCGAGCAGGAAGAGGAAGAGGAGAGCCCCACGGCGAGGCTGCACCGGAAGCTCTACTTCGAGCCCACCGGAGATCAGGAGAGCCTCTACACTAAGCACAGGTGCAACGTGCAGCCAGGGGAGTCGAGTAGTAGAAAGCAGCGTAAGCTAAAGTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
