WERAM Information

Tag Content
WERAM ID WERAM-Hov-0089
Ensembl Protein ID MLOC_68143.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MLOC_68143 MLOC_68143.1 MLOC_68143.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.20e-13 50.1 202 252
Organism Hordeum vulgare
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k+++Cp+C++
  MLOC_68143.1 202 TLCGTCGTNDGKDEFWICCDNCEKWYHGKCVKITPARAEHIKHYRCPECTN 252
                   78****998888999*******************666664479******86 PP
Protein Sequence
(Fasta)		MDGAGAGGAY VARTAEEVFR DLRGRRAGMI KALTEDVDKF FKLCDPEKEN LCLYGYPNET 60
WEVTLPAEEV PPEIPEPALG INFARDGMNE KDWLALVAVH SDSWLLSVAF YFGARFGFDK 120
DNRRRLFNMI NNLPTIYEVV TGIAKKQSKE KTPNSSSKSS KPSMKVLSRA EPRAKAKVPA 180
PKDEEESGED EGDDEEEEHD NTLCGTCGTN DGKDEFWICC DNCEKWYHGK CVKITPARAE 240
HIKHYRCPEC TNGGSNSNKR VKT 263
Nucleotide Sequence
(Fasta)		GCCGGGCGCA AATACTCGCG GAAGCACCCA CAGGATTCCC CGGAAATAAA ACCCACTCCT 60
CCTCCTCCAT CTCCACCTCC ACCTTCCAGG CTGCCTGCCC CTCCCTTCTC CTTCTCTCTC 120
CCCCTCCTGC CGCTCCCACC ACCGCCTCCC TCCTCCCCGT CGCCGCGCTC GCCCGGAGCC 180
CCAGACGCCA TTGCCGACGC CCCCCCATGG ATGGCGCCGG CGCAGGAGGG GCGTACGTCG 240
CGCGCACGGC GGAGGAGGTC TTCCGCGACC TCCGCGGCCG CCGCGCCGGC ATGATCAAGG 300
CCCTCACCGA AGATGTGGAC AAGTTCTTCA AGCTCTGCGA CCCTGAAAAG GAGAACTTGT 360
GCCTTTATGG ATATCCCAAT GAGACATGGG AAGTGACCTT GCCAGCTGAG GAAGTGCCCC 420
CAGAGATCCC TGAACCAGCA TTAGGAATCA ACTTCGCTAG GGATGGAATG AATGAGAAGG 480
ATTGGTTGGC GCTAGTTGCA GTTCACAGTG ATTCCTGGTT ACTGTCCGTC GCATTCTACT 540
TTGGAGCCCG CTTTGGCTTC GACAAAGACA ATAGGAGGCG ACTGTTCAAC ATGATAAACA 600
ACTTGCCCAC TATATACGAG GTAGTGACAG GAATTGCCAA GAAGCAGTCA AAGGAGAAGA 660
CTCCGAACAG CAGTAGCAAG AGCAGCAAGC CCAGTATGAA AGTGCTGTCG AGAGCCGAGC 720
CCCGTGCAAA GGCGAAGGTG CCGGCCCCCA AGGACGAGGA GGAGAGCGGC GAGGACGAGG 780
GCGACGACGA GGAGGAGGAG CACGACAACA CTCTTTGCGG GACTTGCGGC ACCAATGACG 840
GCAAGGACGA GTTCTGGATC TGCTGCGACA ACTGCGAGAA GTGGTACCAC GGCAAGTGCG 900
TCAAGATCAC GCCCGCCCGG GCGGAGCACA TCAAGCACTA CCGGTGCCCG GAGTGCACCA 960
ACGGCGGCTC CAACAGCAAC AAGAGGGTCA AGACATGAGC GGGGTGGGCG CCGGGGGGAA 1020
AGCTGCGCTT GCTGCGAGGA AAACCAAGCA TCTTCGCTCA GCCTCTAGAT ATCATTTATT 1080
CATGGCTTAG TTTCCTTCCT ACTAGTCTGT AAGCGTGCTT CATCATGTTT TAAGAAAAAC 1140
CTTGAGATTT TCGTGTGTGT GTTGACATCA ACCAGCCTTT GTTAATTTCT 1191
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0093 EMT29143 Aegilops tauschii 99 3e-115 411
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 99 9e-115 410
WERAM-Brd-0058 BRADI2G57280.2 Brachypodium distachyon 83 2e-105 379
WERAM-Sei-0012 Si002638m Setaria italica 88 7e-100 360
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 88 7e-100 360
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 88 7e-100 360
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 88 7e-100 360
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 88 7e-100 360
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 88 7e-100 360
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 88 7e-100 360
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 88 7e-100 360
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 88 7e-100 360
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 88 7e-100 360
WERAM-Sob-0057 Sb03g042180.1 Sorghum bicolor 85 3e-97 351
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 80 3e-95 345
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 80 4e-92 334
WERAM-Orbr-0016 OB01G48580.1 Oryza brachyantha 88 1e-89 326
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 88 2e-89 325
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 76 2e-88 322
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 69 1e-81 300
WERAM-Amt-0088 ERM99796 Amborella trichopoda 68 1e-81 300
WERAM-Thc-0077 EOY27191 Theobroma cacao 69 1e-81 299
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 68 2e-81 298
WERAM-Prp-0082 EMJ27202 Prunus persica 68 5e-81 298
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 67 5e-81 298
WERAM-Met-0172 KEH18446 Medicago truncatula 65 6e-81 297
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 67 4e-79 291
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 63 3e-78 288
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 64 7e-78 287
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 63 9e-78 286
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 64 2e-76 283
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 65 1e-75 280
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 59 1e-70 263
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 58 6e-67 251
Created Date 25-Jun-2016