WERAM Information

Tag Content
WERAM ID WERAM-Zem-0014
Ensembl Protein ID GRMZM2G016817_P02
Gene Name Zm.12330
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G016817 GRMZM2G016817_T02 GRMZM2G016817_P02
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.60e-11 45.8 201 251
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        t+C  Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C +
  GRMZM2G016817_P02 201 TLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARAEHIKHYKCPDCSN 251
                        78****988888999*******************666664479******86 PP
Protein Sequence
(Fasta)		MDPGAGAHYS ARTAEEVFRD FRGRRAGMIK ALTNDVEKFY QLCDPEKENL CLYGYPNETW 60
EVTLPAEEVP PEIPEPALGI NFARDGMNEK DWLALVAVHS DAWLLAVAFY FAARFGFDKE 120
ARRRLFNMIN NLPTIFEVAT GVAKKQNKEK EPNNTSKSNK PSSKMTTRPE SHLKATKVAP 180
PKDEDDESGE EYEEEEERDN TLCGSCGTND GKDEFWICCD SCERWYHGKC VKITPARAEH 240
IKHYKCPDCS NKRARA 256
Nucleotide Sequence
(Fasta)		ATTGCCATCT CTAAACCTCA CCCCTCCCTA GTATGCGACC CTGTTTCCTG TCTCCTACCC 60
TCTTGCGGTC TTGCCAGCGC CCCTTCCTCC CTTCGTCTCC GCCGCCGCGG ACTCCTCGCC 120
GGAACCCTAA ATGGACCCCG GCGCCGGTGC ACACTACTCC GCCCGTACCG CGGAGGAAGT 180
CTTCCGCGAT TTCCGCGGCC GCCGCGCGGG CATGATCAAG GCCCTCACCA ACGATGTGGA 240
GAAGTTCTAC CAGCTGTGCG ACCCCGAAAA GGAAAACTTG TGCCTTTATG GCTACCCCAA 300
CGAAACATGG GAAGTAACTT TGCCAGCAGA GGAAGTTCCT CCAGAGATCC CTGAACCAGC 360
TTTGGGTATA AACTTTGCTA GGGATGGCAT GAACGAGAAG GATTGGTTGG CGTTAGTTGC 420
TGTCCACAGC GATGCCTGGT TACTAGCTGT TGCATTCTAC TTTGCAGCCC GGTTTGGGTT 480
TGACAAAGAG GCCAGGCGGC GACTCTTCAA CATGATAAAT AACTTGCCCA CAATATTTGA 540
AGTAGCGACT GGGGTTGCCA AGAAACAAAA CAAGGAGAAG GAACCCAATA ATACCAGCAA 600
AAGCAACAAA CCAAGTTCGA AAATGACAAC AAGACCCGAG TCTCATTTGA AGGCGACAAA 660
AGTGGCGCCC CCTAAGGATG AAGATGATGA GAGCGGTGAA GAGTATGAAG AAGAGGAAGA 720
GCGTGATAAC ACCTTATGTG GATCCTGTGG AACAAATGAC GGCAAGGACG AATTCTGGAT 780
CTGTTGTGAT AGTTGCGAGC GGTGGTACCA TGGGAAGTGT GTCAAGATCA CGCCTGCACG 840
AGCTGAGCAC ATCAAGCACT ACAAATGCCC AGATTGCAGC AACAAGAGGG CAAGAGCCTA 900
GCACCAAGCC CTGCTGTGAC TCTGGAGTGA AGTAAGCGCC AAATCATTGA TGTCTGCAGA 960
TATATGCCTA GCTGTCTAGC TTGTAGACTT GCTTTCCATT TGGAATGAAC GCTGTTGATT 1020
CACTCGGTTG CCCTCAGCAG CTCATGTTGC TCAGGCTTAA TTGTGTTTAA TGTTTTACTA 1080
GCGAAACAAA ATGTGCCAGT GTGTTGCATC GGAGCGTATA TTTTATTATC CGGTAATCGT 1140
ACCCATAGCA AACTTGTCTA TACGTTGCAA CAGGACGTAT TATTGTGCGG TTATTTAAGG 1200
CTAGCCATTT TTGTTTGACT AAAA 1225
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 97 6e-116 414
WERAM-Sei-0086 Si023009m Setaria italica 95 1e-112 402
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 87 2e-106 382
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 85 2e-103 372
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 85 2e-103 372
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 85 2e-103 372
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 85 2e-103 372
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 85 2e-103 372
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 85 2e-103 372
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 85 2e-103 372
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 85 3e-103 372
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 85 1e-102 370
WERAM-Aet-0106 EMT19247 Aegilops tauschii 84 3e-101 364
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 81 7e-101 363
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 81 5e-100 360
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 77 2e-94 342
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 81 1e-93 340
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 76 2e-91 332
WERAM-Amt-0088 ERM99796 Amborella trichopoda 73 7e-90 327
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 82 8e-88 320
WERAM-Thc-0077 EOY27191 Theobroma cacao 73 9e-88 320
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 73 6e-87 317
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 71 1e-86 317
WERAM-Prp-0082 EMJ27202 Prunus persica 71 5e-84 307
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 68 7e-84 307
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 68 2e-83 306
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 69 2e-83 305
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 69 3e-83 305
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 64 2e-82 302
WERAM-Met-0172 KEH18446 Medicago truncatula 67 1e-81 300
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 65 7e-81 297
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 62 1e-79 293
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 63 6e-75 277
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 6e-71 264
Created Date 25-Jun-2016