WERAM Information

Tag Content
WERAM ID WERAM-Php-0090
Ensembl Protein ID PP1S371_53V6.1
Gene Name PHYPADRAFT_152585
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S371_53V6 PP1S371_53V6.1 PP1S371_53V6.1
PP1S371_53V6 PP1S371_53V6.2 PP1S371_53V6.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.20e-13 49.1 195 245
Organism Physcomitrella patens
Domain Profile
  Me_Reader PHD
         PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                     t+C  Cg +++ +++++ Cd C++wfH+kCvk++  +++  k++ CpsC +
  PP1S371_53V6.1 195 TFCGSCGGPYTADEFWIGCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 245
                     79********************************666664479******86 PP
Protein Sequence
(Fasta)		MEGASMSTNP RTVDEVFKDF KGRRLGMLKA LTADVEEFYR QCDPEKENLC LYGFPEEAWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD AWLLAVAFYY GARFDKNERK 120
RLFNMINELP TVFDVVTGKK PVKDKPAVNN SSGTKTKSAT KVEVAQAKPA KPVPPIQKDE 180
EDAFDDEDEE EHGDTFCGSC GGPYTADEFW IGCDICEKWF HGKCVKITPA RAEHIKQYKC 240
PSCSNKRART
Nucleotide Sequence
(Fasta)		ATTGCTGTAG AAGTTTATGA GCTTTTGGAG TCGATGCTGT TTTGCTGTGT GTTTTTCGAG 60
CTCGAGGGCT AGGCGAGTGA TAGCCGGCGG CCTTCGGCAC AGCTTCTGGA AGGGGTTTGA 120
CCGAGGAGAA GTGGCGTCGT TGCAAGAAGC GGTCGCCGGC GCACTTTGTA GCGTAGAAAA 180
CAGTTGAGTA ACGAGGGTTT TAGGCTTGGG GTTGCTGGTA GGGTTCGAGG AGGAGGAGTC 240
GGGAGGGTGG AGGGAGGGAG GGTTCATCTG CTTCAAGATG CGAAGTCCTG GTGATTGCGA 300
GTCCTGGAAG GAGGGAAAGC GTTATGCGGT CCTCTATTCC TCATCGCGCG TTGTATTTAT 360
TTCGTTGTAG GGTGGAGGGG GTTGGAGGGC CGTTGTTTTT TTCACTTGCT TGATTGATTG 420
GTTGGTTGAG AAGTGGAAGC GTAGCTGTGC TTTTATTTAT TTTTTGTCCA ACGCTGACGA 480
GTGTTTTACG AAAGAGGACT CTTCAGCGGG TATTCTTTGC GACAACATGG AGGGGGCCTC 540
GATGTCGACG AATCCGCGGA CGGTGGACGA AGTGTTCAAG GACTTCAAAG GGCGGCGATT 600
GGGAATGCTG AAGGCTCTTA CTGCCGACGT GGAAGAGTTT TACCGCCAAT GTGATCCAGA 660
GAAGGAGAAT TTGTGCTTAT ATGGTTTTCC AGAAGAAGCA TGGGAAGTAA ATCTACCAGC 720
TGAAGAGGTT CCTCCTGAAC TTCCAGAACC TGCTCTTGGT ATCAACTTTG CTAGGGACGG 780
CATGCAGCGT AAAGATTGGT TGTCCTTGGT TGCTGTGCAC AGTGATGCCT GGCTGCTCGC 840
TGTTGCTTTT TATTATGGTG CCCGGTTTGA CAAGAACGAG AGGAAGCGTC TCTTTAATAT 900
GATAAATGAA CTCCCAACAG TATTCGACGT AGTGACAGGA AAGAAGCCTG TGAAGGACAA 960
GCCTGCTGTT AATAATTCCT CTGGCACCAA AACCAAGTCC GCTACGAAGG TGGAAGTGGC 1020
TCAAGCTAAG CCTGCCAAGC CTGTTCCACC AATTCAAAAA GATGAGGAGG ACGCCTTTGA 1080
TGACGAGGAT GAGGAGGAAC ATGGTGACAC CTTCTGTGGA AGTTGCGGTG GGCCTTATAC 1140
TGCTGATGAG TTCTGGATCG GCTGCGATAT CTGTGAGAAA TGGTTCCATG GCAAGTGTGT 1200
GAAAATTACA CCGGCAAGAG CAGAACATAT TAAGCAATAC AAGTGTCCAT CTTGCAGCAA 1260
CAAAAGGGCC CGTACGTAAT TTATCAGGCC ACAGTTTCTT CCTTATGCTA GCCCCTCGAA 1320
GAAAGACCAT TCAAAAAAGT CACCCTTGAC TTCCTTCTAG ACTGGTGTGT TTGATAGGCT 1380
CTAGTGCAAG CAGCTGGGGG GCTAGACTTG GTGCTGATGA GATGTCGTTG GTTGCATTTG 1440
GAAAGCTTGA GGATCCATCA TTCTAATTGC CTAGCTTCAG CCGAGGTACC CACTTGATTG 1500
TTGATCAGGT AGTTTGCAGG ATAAAGAATA CAGGTACCGT GGGACTTGTG TGCATTTTTC 1560
TGCACATGTT GAGAGTTTGG CCAATGGTTA ACTTATCACT ACACTTCGTT GTTAAGGGTA 1620
ATGTGATATT GCGTGTCATT ATTTTCTGC
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 74 1e-87 320
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 74 4e-86 314
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 68 3e-83 305
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 74 3e-82 301
WERAM-Prp-0082 EMJ27202 Prunus persica 70 4e-82 301
WERAM-Amt-0032 ERN11177 Amborella trichopoda 72 1e-81 300
WERAM-Thc-0077 EOY27191 Theobroma cacao 75 3e-81 298
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 67 4e-81 298
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 68 7e-81 297
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 69 1e-80 296
WERAM-Mua-0047 GSMUA_Achr2P18960_001 Musa acuminata 63 2e-79 292
WERAM-Met-0092 KEH28874 Medicago truncatula 67 3e-79 291
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 68 7e-79 290
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 67 2e-78 289
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 65 2e-78 289
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 67 8e-76 280
WERAM-Sei-0118 Si030765m Setaria italica 64 4e-75 278
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 61 2e-74 275
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 62 2e-74 275
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 62 4e-74 275
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 62 4e-74 275
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 63 1e-73 273
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 62 3e-73 271
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 65 1e-72 270
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 3e-72 268
WERAM-Sob-0001 Sb01g003420.1 Sorghum bicolor 59 3e-72 268
WERAM-Orgl-0050 OGLUM05G04310.1 Oryza glumaepatula 56 4e-72 268
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 56 4e-72 268
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 58 2e-71 265
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 58 3e-71 265
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 58 3e-71 265
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 58 3e-71 265
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 58 4e-71 265
WERAM-Aet-0106 EMT19247 Aegilops tauschii 63 3e-69 258
Created Date 25-Jun-2016