WERAM Information

Tag Content
WERAM ID WERAM-Arl-0138
Ensembl Protein ID scaffold_602145.1
Gene Name AL5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_602145.1 scaffold_602145.1 scaffold_602145.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.70e-12 48 205 255
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  scaffold_602145.1 205 TLCGACGDNYASDEFWICCDMCEKWFHGKCVKITPARAEHIKHYKCPSCSN 255
                        78*****9999999********************666664479******86 PP
Protein Sequence
(Fasta)		MEGGASHYNP RTVEEVFRDF KGRRAGIIQA LTTDVEDFFQ QCDPEKENLC LYGFPNEVWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQEKD WLSLVAVHSD AWLLSVSFYF GSRIGFDRAD 120
RKRLFNMINE VPTIFEVVTG NEKKQTKEKP SSANQNGNRS KSNSKVRGLK GKSSKTIQAK 180
DEEEGLELEE GEEEEEEDED EHGETLCGAC GDNYASDEFW ICCDMCEKWF HGKCVKITPA 240
RAEHIKHYKC PSCSNKRARP
Nucleotide Sequence
(Fasta)		TCGTTTCTGA GAGAGACGGA CATGGAAGGA GGAGCTTCGC ACTACAACCC TCGAACTGTC 60
GAAGAAGTCT TTCGAGATTT CAAGGGCCGT CGAGCTGGCA TCATCCAAGC TCTCACCACT 120
GATGTGGAAG ATTTTTTCCA GCAATGCGAC CCTGAGAAGG AAAATCTTTG CTTGTATGGA 180
TTCCCAAATG AAGTGTGGGA AGTTAACTTA CCAGCTGAAG AAGTGCCTCC TGAGCTTCCC 240
GAACCTGCAC TCGGCATTAA CTTTGCCAGA GATGGGATGC AGGAAAAAGA CTGGCTTTCT 300
CTCGTCGCTG TCCACAGTGA TGCGTGGTTA CTTTCTGTGT CCTTTTACTT TGGTTCAAGA 360
ATTGGTTTTG ATAGAGCTGA CAGGAAGCGC TTGTTCAACA TGATAAACGA GGTTCCTACT 420
ATATTTGAAG TTGTAACTGG AAATGAGAAG AAACAAACAA AGGAAAAGCC CTCTTCAGCA 480
AATCAAAATG GCAACAGATC CAAGTCAAAT TCAAAAGTGA GAGGTTTAAA AGGTAAAAGT 540
TCAAAGACGA TACAGGCTAA GGACGAGGAA GAAGGATTAG AGTTAGAGGA AGGGGAAGAG 600
GAAGAGGAAG AGGATGAAGA TGAACACGGT GAAACCCTAT GTGGAGCTTG TGGAGATAAC 660
TATGCTTCTG ATGAATTCTG GATTTGCTGT GACATGTGCG AGAAATGGTT CCACGGGAAG 720
TGTGTGAAGA TCACTCCAGC TAGAGCTGAG CATATCAAGC ATTATAAGTG CCCTTCTTGC 780
AGCAACAAAA GAGCACGACC CTAGATGTTT TATTTCCACT AGTCT 826
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 92 2e-116 415
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 85 1e-105 380
WERAM-Bro-0179 Bo9g151850.1 Brassica oleracea 89 6e-104 374
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 82 3e-102 368
WERAM-Prp-0082 EMJ27202 Prunus persica 79 3e-99 358
WERAM-Thc-0077 EOY27191 Theobroma cacao 80 1e-96 349
WERAM-Amt-0032 ERN11177 Amborella trichopoda 77 2e-96 348
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 79 4e-95 344
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 76 4e-95 344
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 75 3e-93 338
WERAM-Met-0044 KEH37528 Medicago truncatula 70 5e-91 331
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 73 3e-90 328
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 71 7e-86 313
WERAM-Sei-0118 Si030765m Setaria italica 68 2e-85 312
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 66 4e-85 311
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 66 5e-85 311
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 68 8e-85 310
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 66 4e-84 308
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 68 2e-83 305
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 68 3e-83 305
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 68 4e-83 305
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 66 6e-83 304
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 66 6e-83 304
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 66 6e-83 304
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 66 6e-83 304
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 66 6e-83 304
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 66 6e-83 304
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 66 6e-83 304
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 67 2e-82 302
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 66 2e-82 302
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 7e-81 297
WERAM-Aet-0106 EMT19247 Aegilops tauschii 67 1e-80 296
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 67 7e-77 284
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 68 1e-72 270
Created Date 25-Jun-2016