WERAM Information

Tag Content
WERAM ID WERAM-Viv-0068
Ensembl Protein ID VIT_11s0016g01500.t01
Gene Name VIT_11s0016g01500
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_11s0016g01500 VIT_11s0016g01500.t01 VIT_11s0016g01500.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.40e-12 48.2 197 247
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                            t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  VIT_11s0016g01500.t01 197 TLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 247
                            78****99999999********************666664479******86 PP
Protein Sequence
(Fasta)		MDGGPQYNPR TVEEVFRDFK GRRAGMIKAL TTDVEEFYQQ CDPEKENLCL YGFPNELWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLAVAFYFG ARFGFDKADR 120
KRLFNMINDL PTIFEVVTGA AKKQVKEKSS VSNHSSNKSK SNSKVRGSES AKYLKGGQPK 180
DEEEGLDEVD EEEHGDTLCG ACGENYASDE FWICCDICEK WFHGKCVKIT PARAEHIKQY 240
KCPSCSNKRA RP 252
Nucleotide Sequence
(Fasta)		CGGCGATGGA TGGTGGACCG CAGTACAATC CTCGAACTGT AGAAGAGGTT TTCAGGGATT 60
TTAAGGGTCG CAGAGCGGGC ATGATCAAAG CCCTCACCAC TGATGTTGAA GAGTTCTACC 120
AGCAATGCGA TCCCGAGAAG GAAAATCTTT GCCTTTATGG ATTCCCTAAT GAACTGTGGG 180
AAGTTAATTT ACCTGCTGAA GAGGTGCCGC CTGAGCTCCC TGAACCTGCC TTAGGTATTA 240
ATTTTGCCAG AGATGGGATG CAAGAAAAGG ACTGGTTGTC TCTGGTTGCT GTGCACAGTG 300
ATGCTTGGTT ACTTGCTGTG GCCTTCTATT TTGGTGCCAG GTTTGGTTTT GATAAAGCTG 360
ACAGGAAACG TCTTTTCAAT ATGATTAATG ATCTTCCAAC AATATTTGAG GTTGTGACTG 420
GAGCTGCAAA GAAACAAGTA AAGGAGAAGT CATCAGTTTC GAACCATAGT AGCAACAAAT 480
CCAAGTCAAA CTCGAAAGTG AGAGGATCTG AATCAGCTAA ATATTTAAAG GGTGGGCAGC 540
CAAAGGATGA GGAAGAAGGA TTGGATGAGG TAGATGAGGA GGAGCATGGG GATACCTTGT 600
GTGGTGCTTG CGGAGAGAAC TATGCTTCAG ATGAATTCTG GATATGCTGT GACATATGTG 660
AGAAATGGTT CCATGGGAAG TGTGTGAAGA TCACCCCTGC GAGGGCTGAG CACATCAAAC 720
AGTACAAGTG CCCCTCATGC AGCAACAAGA GAGCAAGGCC TTGATATATC CCGTTTGAGG 780
TGGGGAAATT CTCACCTTCT GTAATTCCTG TGTTGAACTC AACTAACTG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0105 EOY30333 Theobroma cacao 93 7e-102 367
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 90 6e-100 360
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 84 9e-100 360
WERAM-Prp-0082 EMJ27202 Prunus persica 80 1e-96 350
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 80 1e-94 343
WERAM-Amt-0032 ERN11177 Amborella trichopoda 84 2e-94 342
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 82 2e-93 339
WERAM-Met-0172 KEH18446 Medicago truncatula 83 1e-91 333
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 79 1e-91 333
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 76 4e-90 328
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 78 2e-89 326
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 78 8e-87 317
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 72 2e-85 312
WERAM-Sei-0086 Si023009m Setaria italica 73 3e-85 311
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 72 4e-84 308
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 73 5e-84 307
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 70 2e-82 302
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 73 3e-82 301
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 73 3e-82 301
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 73 3e-82 301
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 73 3e-82 301
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 73 3e-82 301
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 73 3e-82 301
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 73 3e-82 301
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 69 5e-82 301
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 74 7e-82 300
WERAM-Bro-0167 Bo9g011050.1 Brassica oleracea 74 8e-82 300
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 70 3e-81 298
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 69 2e-80 296
WERAM-Aet-0106 EMT19247 Aegilops tauschii 72 3e-80 295
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 69 1e-79 293
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 75 3e-79 292
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 69 3e-76 281
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 73 3e-73 272
Created Date 25-Jun-2016