WERAM Information

Tag Content
WERAM ID WERAM-Sol-0143
Ensembl Protein ID Solyc12g096040.1.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc12g096040.1 Solyc12g096040.1.1 Solyc12g096040.1.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.40e-12 47.1 198 248
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +Cg++++ ++++++Cd C+ wfH+kCvk++  +++  k++ CpsC+ 
  Solyc12g096040.1.1 198 TLCGACGENYASDEFWICCDICEVWFHGKCVKITPARAEHIKQYKCPSCTS 248
                         78****99999999********************666664479******85 PP
Protein Sequence
(Fasta)		MDGAQQYNPR TVEEVFRDFK GRRAALVKAL TTDVEEFYQQ CDPEKENLCL YGFPSESWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLSVAFYFG ARFGFDRADR 120
RRLFNMINDL PTIFEVVSGT AKKQSKDKSS MSNHSSTKSK SNSKVVQRGS ESQIKYSRPQ 180
PKDDDEDGLD EDDEQGETLC GACGENYASD EFWICCDICE VWFHGKCVKI TPARAEHIKQ 240
YKCPSCTSSK RTRP 254
Nucleotide Sequence
(Fasta)		ATGGATGGAG CTCAGCAGTA CAATCCTCGA ACTGTTGAAG AAGTGTTTAG AGATTTTAAG 60
GGTCGAAGAG CTGCACTTGT CAAAGCCCTT ACTACTGATG TTGAAGAGTT TTATCAACAA 120
TGTGACCCAG AGAAAGAGAA CCTCTGCCTT TATGGATTTC CCAGTGAAAG TTGGGAAGTC 180
AATTTACCAG CTGAAGAAGT GCCCCCAGAG CTTCCTGAGC CTGCTTTGGG CATAAACTTC 240
GCCCGAGATG GCATGCAAGA GAAGGACTGG CTCTCCTTGG TTGCTGTGCA TAGTGATGCA 300
TGGTTACTTT CTGTTGCCTT TTATTTTGGT GCTAGATTTG GGTTTGATAG AGCTGATAGG 360
AGAAGGTTGT TCAATATGAT AAATGATCTC CCTACAATTT TCGAGGTTGT GTCTGGGACA 420
GCCAAGAAAC AATCAAAAGA CAAGTCATCA ATGTCAAATC ACAGCAGCAC CAAGTCTAAG 480
TCAAACTCAA AGGTGGTACA ACGTGGTTCT GAATCTCAGA TCAAGTATTC AAGACCACAA 540
CCAAAAGATG ACGATGAAGA TGGTTTGGAT GAAGATGATG AGCAAGGAGA AACACTATGT 600
GGTGCTTGTG GTGAAAACTA TGCATCTGAT GAATTCTGGA TCTGCTGTGA CATATGTGAG 660
GTATGGTTCC ATGGGAAGTG TGTTAAAATC ACTCCTGCCA GGGCTGAGCA TATCAAGCAG 720
TACAAGTGCC CATCTTGCAC CAGCAGCAAG AGAACACGCC CTTGA 766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0061 VIT_09s0002g01600.t01 Vitis vinifera 84 4e-88 321
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 82 1e-87 320
WERAM-Amt-0032 ERN11177 Amborella trichopoda 81 6e-87 317
WERAM-Prp-0082 EMJ27202 Prunus persica 80 6e-84 307
WERAM-Thc-0077 EOY27191 Theobroma cacao 82 1e-83 306
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 79 1e-82 303
WERAM-Met-0172 KEH18446 Medicago truncatula 76 4e-82 301
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 75 4e-82 301
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 74 6e-78 287
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 74 1e-76 283
WERAM-Brr-0011 Bra002307.1-P Brassica rapa 71 6e-76 281
WERAM-Bro-0167 Bo9g011050.1 Brassica oleracea 74 9e-76 280
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 71 2e-75 279
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 67 2e-75 279
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 68 1e-74 276
WERAM-Sei-0118 Si030765m Setaria italica 65 1e-73 273
WERAM-Orp-0077 OPUNC07G20290.1 Oryza punctata 70 7e-73 270
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 2e-72 269
WERAM-Orm-0075 OMERI07G18160.1 Oryza meridionalis 70 3e-72 268
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 68 3e-72 268
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 65 4e-72 268
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 67 2e-71 265
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 67 2e-71 265
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 67 2e-71 265
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 67 2e-71 265
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 67 2e-71 265
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 67 2e-71 265
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 67 2e-71 265
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 67 1e-70 263
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 69 2e-70 263
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 65 2e-70 262
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 9e-69 257
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 2e-68 255
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 69 6e-63 238
Created Date 25-Jun-2016