WERAM Information

Tag Content
WERAM ID WERAM-Pot-0079
Ensembl Protein ID POPTR_0006s23990.1
Gene Name POPTR_0006s23990g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0006s23990 POPTR_0006s23990.1 POPTR_0006s23990.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-12 48.2 198 248
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  POPTR_0006s23990.1 198 TLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 248
                         78****99999999********************666664479******86 PP
Protein Sequence
(Fasta)		MDGGASYNPR TVEEVFRDFK GRRAGMIKAL TTDVEEFYQQ CDPEKENLCL YGFPSEQWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLSVSFYFG SRFGFDKADR 120
KRLFNMINDL PTVFEVVTGT AKKQVKEKSS VSNHSSNKTK SNSKRGSESQ GKFSKVMQAK 180
DEDGEGLDEE DEEEHGETLC GACGENYASD EFWICCDICE KWFHGKCVKI TPARAEHIKQ 240
YKCPSCSNKR ARP 253
Nucleotide Sequence
(Fasta)		ATGATGGGCC TGTTTGGAGA GACACATCCA TCTCCGGTAC TTGGCGGACT CTTCACCCTT 60
TTATAAAATC CGATTAATTG ATCCATTTCA TTCCCGATTC AAATCCAACA CCTTCCTTCT 120
TCTATCTCTC TCCGTGTTTG AGAGAGAGAG TGACAGACAG AGGACGAAGC TCGTCTTCTT 180
GATTAAGCGG GGGTCATTTA GTGACGATGG ACGGCGGGGC ATCTTATAAT CCTCGCACGG 240
TGGAGGAAGT CTTTAGGGAT TTTAAAGGTC GAAGAGCTGG CATGATTAAA GCTCTTACTA 300
CTGATGTTGA AGAGTTTTAC CAGCAGTGTG ATCCTGAGAA GGAAAATCTC TGCCTTTATG 360
GATTTCCTAG CGAGCAGTGG GAGGTCAATT TACCTGCTGA AGAGGTGCCT CCTGAGCTTC 420
CAGAGCCTGC TTTAGGTATC AACTTTGCCA GAGATGGGAT GCAAGAAAAG GACTGGTTGT 480
CTCTGGTTGC TGTTCACAGT GATGCATGGT TACTTTCTGT GTCCTTCTAT TTTGGGTCTA 540
GGTTTGGATT TGACAAAGCG GATAGAAAAC GCCTTTTCAA CATGATAAAT GATCTTCCAA 600
CAGTGTTTGA GGTTGTGACT GGAACGGCCA AGAAACAAGT AAAAGAAAAG TCATCAGTTT 660
CAAATCACAG CAGCAATAAA ACTAAATCAA ACTCTAAGCG AGGCTCTGAA TCCCAAGGCA 720
AGTTTTCAAA GGTAATGCAA GCAAAAGATG AAGACGGCGA GGGCTTGGAT GAAGAAGATG 780
AAGAAGAGCA TGGAGAGACA CTATGTGGTG CTTGTGGAGA AAACTATGCC TCTGATGAGT 840
TCTGGATTTG CTGTGACATC TGCGAAAAGT GGTTCCATGG AAAATGTGTG AAGATCACCC 900
CAGCAAGGGC TGAGCATATT AAGCAGTACA AATGCCCATC TTGCAGCAAC AAAAGAGCAC 960
GGCCTTGATG AAGACTGGAG CTTGCTCTCT GTGTATTATG TATGGCATGT GGGACTGCTA 1020
ACTGTCTAGT AGGTCAGGTT TGTTCTTAGT CATGTGTCCT TTATTTATCT AGGAAAACTA 1080
TTTGGGTGTT ATGAGTAGTT TGCAAAATCT GCTGTTTATT TTAACCATAA ATTAGGATAT 1140
TTGTTACACT TTCAGCTTGG CAACCATTTT CCCCATGATT GGGATATGAT TGTTTGTTGA 1200
CGTTATGTTT ATATTCAATC TGTCCAGTTC TATGAAGGCC GTTTATTCTG TC 1253
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0016 VIT_04s0008g01670.t01 Vitis vinifera 90 1e-101 366
WERAM-Prp-0082 EMJ27202 Prunus persica 88 5e-101 364
WERAM-Thc-0077 EOY27191 Theobroma cacao 85 5e-100 360
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 87 5e-99 357
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 81 8e-94 340
WERAM-Amt-0032 ERN11177 Amborella trichopoda 85 1e-93 339
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 79 2e-93 339
WERAM-Met-0013 KEH39913 Medicago truncatula 79 1e-92 336
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 80 9e-91 330
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 77 7e-90 327
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 76 2e-89 326
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 77 4e-89 324
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 76 2e-87 318
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 72 4e-84 308
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 71 1e-83 306
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 71 2e-83 306
WERAM-Sei-0086 Si023009m Setaria italica 71 2e-83 305
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 71 5e-83 304
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 72 3e-82 301
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 72 3e-82 301
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 72 3e-82 301
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 72 3e-82 301
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 72 3e-82 301
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 72 3e-82 301
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 72 3e-82 301
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 72 3e-82 301
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 72 5e-82 301
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 71 1e-81 300
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 69 6e-81 297
WERAM-Aet-0106 EMT19247 Aegilops tauschii 72 1e-80 296
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 74 1e-79 293
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 64 2e-79 292
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 70 1e-75 280
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 72 1e-72 270
Created Date 25-Jun-2016