WERAM Information

Tag Content
WERAM ID WERAM-Orl-0043
Ensembl Protein ID KN538915.1_FGP008
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
KN538915.1_FG008 KN538915.1_FGT008 KN538915.1_FGP008
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.00e-13 48.9 174 224
Organism Oryza longistaminata
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C++
  KN538915.1_FGP008 174 TLCGTCGTNDGKDEFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTN 224
                        78****998888999*******************666664479******97 PP
Protein Sequence
(Fasta)		MIKALTTDVE KFYKLCDPEK ENLCLYGYPN ETWEVTLPAE EVPPEIPEPA LGINFARDGM 60
NEKDWLALVA VHSDSWLLSV AFYFGARFGF DREARRRLFN MINNLPTIFE VVTGAAKKQA 120
KEKTPNSSSK SNKPSSKVQS KAESRSKSKL SAPKDEEGSG DDEGEEEEDD HDNTLCGTCG 180
TNDGKDEFWI CCDNCEKWYH GKCVKITPAR AEHIKQYKCP DCTNKRARA 229
Nucleotide Sequence
(Fasta)		ATGATCAAGG CCCTCACCAC CGATGTGGAG AAGTTTTACA AGCTCTGCGA CCCTGAAAAG 60
GAGAACTTGT GCCTTTATGG ATATCCTAAT GAAACATGGG AGGTGACCTT GCCAGCTGAG 120
GAAGTGCCCC CAGAGATCCC TGAACCAGCA TTGGGAATCA ACTTCGCTAG GGATGGCATG 180
AATGAGAAAG ACTGGTTGGC GCTAGTCGCA GTTCACAGTG ATTCCTGGTT ACTGTCTGTT 240
GCATTCTACT TTGGAGCCCG ATTTGGGTTT GACAGAGAAG CAAGGAGGCG ACTCTTTAAC 300
ATGATAAACA ATTTGCCAAC AATATTTGAG GTAGTGACAG GAGCTGCTAA GAAGCAGGCG 360
AAAGAAAAGA CTCCCAACAG TAGTAGCAAG AGCAACAAGC CTAGTTCGAA AGTGCAGTCA 420
AAAGCTGAGT CTCGTTCAAA ATCTAAGCTG TCAGCCCCCA AGGATGAAGA GGGAAGTGGT 480
GATGACGAGG GAGAGGAAGA GGAGGATGAC CATGACAACA CTTTGTGTGG GACCTGTGGA 540
ACCAACGATG GCAAGGACGA GTTCTGGATC TGTTGCGATA ACTGCGAGAA GTGGTATCAT 600
GGGAAGTGCG TCAAGATCAC ACCCGCTCGC GCCGAGCATA TCAAGCAGTA CAAGTGCCCG 660
GACTGCACCA ACAAGAGGGC CCGGGCATGA 691
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 100 7e-100 360
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 100 7e-100 360
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 100 7e-100 360
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 100 7e-100 360
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 100 7e-100 360
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 100 7e-100 360
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 100 7e-100 360
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 100 7e-100 360
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 100 2e-99 358
WERAM-Orbr-0016 OB01G48580.1 Oryza brachyantha 97 2e-97 352
WERAM-Sob-0057 Sb03g042180.1 Sorghum bicolor 93 1e-94 343
WERAM-Sei-0012 Si002638m Setaria italica 91 4e-93 337
WERAM-Zem-0054 GRMZM2G080917_P01 Zea mays 91 6e-92 333
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 85 5e-90 327
WERAM-Lep-0015 LPERR01G34320.1 Leersia perrieri 93 2e-89 325
WERAM-Aet-0093 EMT29143 Aegilops tauschii 89 2e-89 325
WERAM-Hov-0089 MLOC_68143.1 Hordeum vulgare 88 6e-89 323
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 88 7e-89 323
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 79 1e-83 306
WERAM-Amt-0088 ERM99796 Amborella trichopoda 72 6e-78 287
WERAM-Glm-0204 GLYMA16G00680.1 Glycine max 69 3e-77 285
WERAM-Thc-0077 EOY27191 Theobroma cacao 73 6e-77 284
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 74 6e-77 284
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 73 2e-76 282
WERAM-Prp-0082 EMJ27202 Prunus persica 69 5e-75 277
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 69 1e-74 276
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 70 1e-74 276
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 67 3e-74 275
WERAM-Met-0172 KEH18446 Medicago truncatula 68 1e-72 270
WERAM-Arl-0088 fgenesh2_kg.5__ 761__ AT3G42790.1 Arabidopsis lyrata 66 2e-72 269
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 65 1e-70 263
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 65 1e-70 263
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 63 4e-67 251
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 61 5e-62 234
Created Date 25-Jun-2016