WERAM Information

Tag Content
WERAM ID WERAM-Sot-0014
Ensembl Protein ID PGSC0003DMT400012523
Gene Name PGSC0003DMG400004887
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400004887 PGSC0003DMT400012523 PGSC0003DMT400012523
PGSC0003DMG400004887 PGSC0003DMT400012524 PGSC0003DMT400012524
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.90e-12 47 200 250
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                           t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC  
  PGSC0003DMT400012523 200 TLCGACGENYAADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSH 250
                           78*****999999*********************555554479******85 PP
Protein Sequence
(Fasta)		MDGGGGGEQF DSRTVEDVFG DFKRRRTALI KALTVDVEEF YQQCDPEKEN LCLYGLPNEQ 60
WEVNLPAEEV PPELPEPALG INFARDGMED KDWLSLVAVH SDSWLLSVAF YFGARFGFDK 120
ASRKKLFNMI NELPTIYEVV TGAVKKQQKE KSSGHSGKKS KSNSKAQRAP DYQEKLAKLQ 180
PKDEEEGLDE QEDEDEHGET LCGACGENYA ADEFWICCDI CEKWFHGKCV KITPAKAEHI 240
KQYKCPSCSH KRARVDI 257
Nucleotide Sequence
(Fasta)		GGTTTCCTCA TCATCTTCTC TTCACTTATT AAAACCCTTT TTCCCATTCT TCTTTGTTTC 60
TACTCACAAT TCAAAATCCC CTCCTCCCTC TCTTTTCCCC CCTTGAACTG TGCAGCCGTA 120
CGCCACTCTC TTTTTCTTAC AAATTTCCTT CGAGGTTGCT CTACTGATTA ATGGACGGTG 180
GTGGAGGAGG AGAACAGTTT GATTCCCGAA CTGTGGAAGA TGTTTTTGGG GATTTCAAGA 240
GACGACGTAC TGCTTTGATT AAGGCTCTTA CCGTAGATGT GGAAGAATTT TATCAGCAGT 300
GTGATCCTGA GAAGGAAAAC TTGTGCTTGT ATGGTCTCCC AAATGAACAA TGGGAGGTCA 360
ATCTGCCTGC TGAAGAAGTA CCACCAGAGC TCCCTGAGCC TGCTCTTGGT ATTAACTTTG 420
CTAGAGATGG GATGGAAGAC AAGGATTGGC TATCCTTGGT TGCTGTCCAT AGTGATTCCT 480
GGCTGCTTTC TGTCGCCTTC TATTTTGGTG CTAGATTTGG ATTTGATAAA GCCAGCAGGA 540
AGAAGCTTTT CAACATGATA AATGAATTGC CTACAATATA TGAAGTAGTG ACTGGTGCTG 600
TAAAGAAACA ACAGAAAGAA AAGTCTTCTG GCCACAGTGG CAAAAAATCC AAGTCAAATT 660
CCAAGGCGCA GAGGGCACCA GATTATCAGG AGAAGTTAGC AAAGTTGCAG CCTAAAGATG 720
AAGAGGAGGG TTTGGATGAG CAGGAGGATG AGGATGAGCA TGGCGAGACA CTGTGTGGTG 780
CCTGTGGAGA AAATTATGCG GCAGATGAAT TTTGGATATG CTGTGACATA TGTGAAAAGT 840
GGTTCCACGG CAAGTGTGTG AAGATTACCC CTGCCAAGGC TGAGCATATC AAGCAATACA 900
AGTGTCCGTC TTGTAGCCAC AAGAGAGCTC GAGTTGACAT ATAAAATTTG ATAAAGTAGC 960
ATCTTCTGTT AGTCAGGTTA TTCAGGCCGT TTGGCTCTCT AACGAGTGGA AGTTTAATGG 1020
CACTGTGATT CATCTTTCTA TACTGTTGGT TAGAACATGC AGCTGATGAA TAGGGAAAGG 1080
TTCTATTGAT GGTTTAGTTA TAAAAAGAGT CTTAAGTAGC AAAAACAGGT ACATACTGTG 1140
AGTTTAAACA GATAATGTCT CTTCTTTAGT CGTTTTAGTA GGATTAAGTC TCATTGATGT 1200
GATCTATTGA GCTTCCACCA ACTTTGGTGT ACATGTCTCT TGGTTTTTAA ACATTGATGT 1260
TGCCTATAAT TGTGAATTAT GGTCGTGTTG ATTACATACA CCATTCAAAA 1311
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0079 Solyc06g062850.2.1 Solanum lycopersicum 97 5e-105 377
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 76 1e-87 320
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 75 1e-86 316
WERAM-Prp-0082 EMJ27202 Prunus persica 76 9e-86 313
WERAM-Thc-0077 EOY27191 Theobroma cacao 77 2e-85 312
WERAM-Glm-0204 GLYMA16G00680.1 Glycine max 78 9e-85 310
WERAM-Amt-0032 ERN11177 Amborella trichopoda 75 1e-84 310
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 77 3e-84 308
WERAM-Met-0172 KEH18446 Medicago truncatula 76 2e-81 299
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 71 5e-81 297
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 71 9e-81 296
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 71 9e-81 296
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 71 9e-81 296
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 71 9e-81 296
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 71 9e-81 296
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 71 9e-81 296
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 71 9e-81 296
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 71 9e-81 296
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 72 6e-80 294
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 71 2e-79 293
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 72 2e-79 292
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 71 3e-79 292
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 70 3e-79 291
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 67 1e-78 289
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 69 2e-78 289
WERAM-Brd-0098 BRADI4G21040.1 Brachypodium distachyon 71 3e-78 288
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 67 2e-76 282
WERAM-Sei-0086 Si023009m Setaria italica 67 5e-76 281
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 65 3e-75 278
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 73 7e-73 270
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 7e-73 270
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 63 8e-73 270
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 68 8e-73 270
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 1e-67 253
Created Date 25-Jun-2016