WERAM Information

Tag Content
WERAM ID WERAM-Sol-0079
Ensembl Protein ID Solyc06g062850.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc06g062850.2 Solyc06g062850.2.1 Solyc06g062850.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.60e-12 47 200 250
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC  
  Solyc06g062850.2.1 200 TLCGACGENYAADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSH 250
                         78*****999999*********************555554479******85 PP
Protein Sequence
(Fasta)		MDAGGGGEQF DSRTVEDVFG DFKRRRTALI KALTVDVEEF YQQCDPEKEN LCLYGLPNEQ 60
WEVNLPAEEV PPELPEPALG INFARDGMED KDWLSLVAVH SDSWLLSVAF YFGARFGFDK 120
ASRKKLFNMI NELPTIYEVV TGASKKQQKE KSSGHSGKKS KSNSKARAQD YQEKLAKLQA 180
KDEEEEGLDE QEDEDEHGET LCGACGENYA ADEFWICCDI CEKWFHGKCV KITPAKAEHI 240
KQYKCPSCSH KRPRADI 257
Nucleotide Sequence
(Fasta)		CATCATCTTC TCTTCACTTA TTAAAACCCT TTTCCCCATT CTTTGTTTCT ACACACAATT 60
CAAAATCCCC TCCTCCCTCT CTTTCCCCCC CTTTGAACTC TGCAGCCGTA CGCCACTCTC 120
ATTTTCCTGC GAATTTCCTT CGAGGTTGCT CTTCTGATTA ATGGACGCCG GTGGAGGAGG 180
AGAACAGTTT GATTCCCGAA CTGTGGAAGA TGTGTTTGGG GATTTCAAGA GACGACGAAC 240
TGCTTTGATT AAGGCTCTTA CTGTTGATGT GGAAGAATTT TATCAGCAGT GTGATCCTGA 300
GAAGGAAAAC TTGTGCTTGT ATGGTCTCCC AAATGAACAA TGGGAGGTCA ATCTGCCTGC 360
TGAAGAAGTA CCACCTGAAC TCCCTGAGCC TGCTCTTGGT ATTAACTTTG CTAGAGATGG 420
GATGGAAGAC AAGGATTGGC TATCCTTAGT TGCTGTCCAT AGTGATTCCT GGCTGCTTTC 480
TGTCGCCTTC TATTTTGGTG CTAGATTTGG GTTTGATAAA GCCAGCAGGA AGAAGCTTTT 540
CAACATGATA AATGAACTGC CTACAATATA TGAAGTAGTG ACTGGTGCCT CAAAGAAACA 600
ACAGAAAGAA AAATCTTCTG GCCATAGTGG CAAGAAATCC AAGTCAAATT CCAAGGCGAG 660
GGCACAAGAC TATCAGGAGA AGTTAGCAAA GTTGCAGGCT AAAGATGAAG AGGAGGAGGG 720
TTTGGATGAG CAGGAGGACG AGGATGAGCA TGGCGAGACA CTGTGTGGTG CCTGTGGAGA 780
AAATTATGCA GCAGATGAAT TTTGGATATG CTGTGACATT TGTGAAAAGT GGTTCCACGG 840
CAAGTGTGTG AAGATCACCC CTGCCAAGGC TGAGCATATC AAGCAATACA AGTGTCCGTC 900
TTGTAGCCAC AAGAGACCTC GAGCTGACAT ATAAAATTTG ATAAAGTAGC ATCTTCTGTT 960
AGTCAGGTTA TTCAGGCTGT TTGGCTCTCT ACCTCGTGGA GGTTTAATAG CACTGTGGTT 1020
CATCTTTGTA CACTGTTGGT TAGAACATGC AGCTGATGAA TAGGGAGGGT TCTATTGATG 1080
GTGGTTTAGT TATAAAAAAA GTAGTCTTAA AGTAGCAAAA ACAGGTACAT ACTATGAGTT 1140
TAAACAGTTG ATGTCTCTTC TTTAGTTGTT TTAGTAGGAG GATTTGATGT GGTCTATTGA 1200
GCTTCCACCA ACTTTGGTGT ACATGTCTCT TTGGTTTTTA AACACTTAAT GTTGCCTATA 1260
ATTG 1265
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 97 2e-105 379
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 72 1e-85 313
WERAM-Thc-0077 EOY27191 Theobroma cacao 76 1e-85 313
WERAM-Amt-0088 ERM99796 Amborella trichopoda 75 2e-83 306
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 70 2e-83 305
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 75 5e-83 304
WERAM-Prp-0082 EMJ27202 Prunus persica 74 7e-83 303
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 76 8e-82 300
WERAM-Met-0013 KEH39913 Medicago truncatula 70 2e-80 295
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 71 3e-80 295
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 70 5e-80 294
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 70 3e-79 291
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 67 2e-78 289
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 67 3e-78 288
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 67 3e-78 288
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 67 3e-78 288
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 67 3e-78 288
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 67 3e-78 288
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 67 3e-78 288
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 67 3e-78 288
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 67 3e-78 288
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 71 8e-78 287
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 68 1e-77 286
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 67 2e-77 286
WERAM-Sob-0072 Sb04g023220.1 Sorghum bicolor 67 4e-77 285
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 65 3e-76 282
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 66 1e-75 280
WERAM-Sei-0118 Si030765m Setaria italica 66 2e-74 276
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 4e-74 275
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 61 7e-74 274
WERAM-Aet-0106 EMT19247 Aegilops tauschii 63 2e-72 269
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 67 1e-71 266
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 69 6e-71 264
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 62 6e-67 251
Created Date 25-Jun-2016