WERAM Information

Tag Content
WERAM ID WERAM-Sob-0072
Ensembl Protein ID Sb04g023220.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g023220 Sb04g023220.1 Sb04g023220.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.50e-12 46.5 202 251
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C  Cg+++++ +++++Cd C++wfH+kCv ++  +++  k++ CpsC +
  Sb04g023220.1 202 LCGSCGESYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPSCST 251
                    7**********99********************555554479******86 PP
Protein Sequence
(Fasta)		MDGDGGGAAA VHHHTRSPED VFRDFRARRA GIVKALTTDV EKFYQQCDPE KENLCLYGLP 60
NETWEVTLPA EEVPPELPEP ALGINFARDG MIEKDWLSLV AVHSDAWLLS VAFYFGARFG 120
FDKEARRRLF TMINNLPTVY EVVTGVAKKQ SKAPNGSSKS SKSNSKPSKQ TNSNSKPAKP 180
THPKEEEDSG HEDAEEEDQA YLCGSCGESY ANGEFWICCD VCEKWFHGKC VRITPAKAEH 240
IKQYKCPSCS TKRSRE 256
Nucleotide Sequence
(Fasta)		GGTATTGCGC TCCTCGCCTC GCCTTCTCTA ATCCTCTTCT GCTCCCTCCC TCCACTACCA 60
GTCCACCACC ACCACACCCC CACTGCTGCC GTCGCTTCCC CCCAAACCCT AGCCAAGGGG 120
ACACGGTGGC CGGCGATGGA CGGCGACGGA GGAGGCGCTG CGGCGGTGCA CCACCACACG 180
CGCTCCCCCG AGGACGTCTT CCGCGATTTC CGCGCGCGCC GCGCCGGCAT CGTCAAGGCG 240
CTCACCACGG ATGTGGAGAA GTTCTATCAG CAGTGCGATC CAGAGAAAGA GAACTTGTGC 300
CTTTATGGTT TGCCAAATGA GACTTGGGAG GTCACTCTTC CAGCTGAGGA AGTACCTCCT 360
GAGCTTCCAG AACCCGCACT GGGGATAAAC TTTGCACGTG ATGGAATGAT CGAAAAAGAT 420
TGGCTGTCTC TAGTTGCAGT TCATAGTGAT GCATGGCTCC TGTCCGTTGC ATTCTACTTT 480
GGTGCTCGCT TTGGATTTGA TAAAGAGGCC AGGAGAAGGC TCTTCACCAT GATTAATAAC 540
CTGCCCACTG TTTATGAAGT TGTGACGGGG GTTGCTAAGA AGCAATCGAA AGCCCCCAAT 600
GGCAGCAGCA AAAGCAGCAA ATCTAACTCT AAACCATCAA AACAGACCAA CTCTAACAGT 660
AAGCCTGCGA AGCCAACCCA CCCAAAAGAA GAGGAGGACA GCGGCCATGA GGACGCAGAG 720
GAGGAGGACC AGGCGTACCT GTGTGGGTCC TGTGGGGAGA GCTATGCGAA CGGGGAGTTC 780
TGGATCTGCT GCGATGTCTG CGAGAAGTGG TTCCATGGCA AGTGTGTCCG CATCACCCCA 840
GCGAAGGCGG AGCACATCAA GCAGTACAAG TGTCCCAGCT GCAGCACCAA GCGGAGCCGG 900
GAATGACCGG CAACCCTGGC CTGGGACAGG ACTTGCTCCC AGTTAACGGA AGCATTTAGA 960
ATCATTAGGA GCAGTGAAGC GGTGTGTCAT TAGAACCGCT TCACCTGTTT AGCAGACCGG 1020
TGCTTGTGCC GGCTGTTGTA TGTCTCGTCG TGTTGTAAAC TGGTAAGGGA CATGGTAGCT 1080
AGTGGTGATG TGTTGTGTTA GCAGGCTGAC TGCTGTCATC GTAGTGTCGG ATGAACTGCT 1140
GGAGTTTGGA AACTCATGTT CAGTAATTAA GTGCTGCTTA GTGTGTATG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0047 GRMZM2G063864_P01 Zea mays 94 2e-102 369
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 90 2e-99 358
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 90 3e-99 358
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 90 2e-98 355
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 90 2e-98 355
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 90 2e-98 355
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 90 2e-98 355
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 90 2e-98 355
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 90 2e-98 355
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 90 2e-98 355
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 91 5e-98 354
WERAM-Orbr-0027 OB02G28450.1 Oryza brachyantha 89 1e-96 349
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 83 3e-96 348
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 71 2e-87 318
WERAM-Sei-0038 Si010902m Setaria italica 73 7e-84 307
WERAM-Thc-0077 EOY27191 Theobroma cacao 70 7e-82 300
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 70 6e-81 297
WERAM-Amt-0088 ERM99796 Amborella trichopoda 70 2e-80 295
WERAM-Glm-0204 GLYMA16G00680.1 Glycine max 68 1e-79 293
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 68 2e-79 292
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 69 3e-79 291
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 71 4e-79 291
WERAM-Prp-0081 EMJ24886 Prunus persica 67 1e-77 286
WERAM-Arl-0088 fgenesh2_kg.5__ 761__ AT3G42790.1 Arabidopsis lyrata 67 1e-76 283
WERAM-Orl-0073 KN539572.1_FGP001 Oryza longistaminata 90 2e-76 283
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 66 3e-76 281
WERAM-Met-0172 KEH18446 Medicago truncatula 65 4e-76 281
WERAM-Aet-0106 EMT19247 Aegilops tauschii 65 2e-75 279
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 63 3e-75 278
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 66 8e-75 277
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 65 3e-74 275
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 67 6e-73 271
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 65 7e-69 257
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 2e-65 246
Created Date 25-Jun-2016