WERAM Information

Tag Content
WERAM ID WERAM-Org-0024
Ensembl Protein ID ORGLA02G0179500.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORGLA02G0179500 ORGLA02G0179500.1 ORGLA02G0179500.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.90e-11 44.6 214 263
Organism Oryza glaberrima
Domain Profile
  Me_Reader PHD
            PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        +C +Cg+++++ +++++Cd C++wfH+kCv ++  +++  k++ Cp C  
  ORGLA02G0179500.1 214 MCGACGETYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPGCSS 263
                        7**********99********************555554479******75 PP
Protein Sequence
(Fasta)		MDEGGGAGAA AAAAGNAAGA AAVHHNARSA EDVFRDFRAR RAGIVKALTT DVEKFYRQCD 60
PEKENLCLYG LPNETWDVTL PAEEVPPELP EPALGINFAR DGMIEKDWLS LVAVHSDAWL 120
LSVAFYFGAR FGFDKEARRR LFTMINGLPT VYEVVTGIAK KQTKVSNGSS KSNKSNPKPS 180
KQSNSNSKPA KPPQPKDEED SGPEGAEDED QAYMCGACGE TYANGEFWIC CDVCEKWFHG 240
KCVRITPAKA EHIKQYKCPG CSSKRSRE 268
Nucleotide Sequence
(Fasta)		ATGGACGAGG GAGGCGGCGC TGGTGCTGCG GCTGCCGCCG CCGGGAACGC GGCGGGGGCG 60
GCGGCGGTGC ACCACAACGC GCGGTCCGCG GAGGACGTCT TCCGCGACTT CCGCGCGCGC 120
CGCGCGGGCA TCGTCAAGGC GCTCACCACC GATGTGGAGA AGTTCTACCG GCAGTGCGAC 180
CCCGAGAAAG AGAACCTGTG CCTTTATGGA TTGCCCAATG AGACCTGGGA CGTGACCCTT 240
CCAGCTGAGG AAGTACCTCC TGAACTTCCA GAACCAGCAC TGGGCATAAA CTTTGCTCGT 300
GATGGAATGA TCGAAAAAGA TTGGTTGTCG CTGGTTGCAG TTCATAGCGA TGCATGGCTA 360
CTGTCTGTAG CATTTTACTT TGGGGCTCGC TTTGGATTTG ATAAGGAAGC CAGGAGACGG 420
CTCTTCACCA TGATTAATGG TCTTCCCACT GTATATGAAG TTGTGACGGG AATCGCCAAG 480
AAGCAAACAA AAGTCTCCAA TGGCAGCAGC AAAAGCAACA AGTCCAACCC TAAACCATCG 540
AAGCAATCCA ATTCTAACAG CAAGCCTGCA AAGCCACCTC AGCCGAAAGA TGAGGAAGAC 600
AGCGGCCCAG AAGGCGCGGA GGATGAGGAC CAGGCTTACA TGTGTGGCGC TTGCGGAGAG 660
ACTTACGCGA ACGGTGAGTT CTGGATCTGC TGCGACGTCT GCGAGAAGTG GTTCCATGGC 720
AAATGCGTTC GGATCACCCC TGCGAAGGCA GAGCACATCA AGCAGTACAA GTGCCCTGGC 780
TGCAGCAGCA AGAGGAGCCG AGAATGA 808
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 100 1e-114 409
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 100 2e-113 405
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 100 2e-113 405
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 100 2e-113 405
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 100 2e-113 405
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 100 2e-113 405
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 100 4e-113 404
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 91 1e-111 399
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 96 1e-110 396
WERAM-Orbr-0027 OB02G28450.1 Oryza brachyantha 96 3e-109 391
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 89 6e-105 377
WERAM-Sob-0072 Sb04g023220.1 Sorghum bicolor 90 4e-104 374
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 89 3e-102 368
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 71 7e-91 330
WERAM-Orl-0073 KN539572.1_FGP001 Oryza longistaminata 100 1e-89 326
WERAM-Sei-0038 Si010902m Setaria italica 70 1e-85 313
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 69 2e-85 312
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 67 1e-81 300
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 70 9e-81 297
WERAM-Amt-0088 ERM99796 Amborella trichopoda 66 9e-81 297
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 67 1e-80 296
WERAM-Thc-0077 EOY27191 Theobroma cacao 70 1e-80 296
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 67 3e-80 295
WERAM-Prp-0082 EMJ27202 Prunus persica 64 1e-77 286
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 63 6e-77 284
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 2e-76 283
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 62 3e-76 282
WERAM-Met-0172 KEH18446 Medicago truncatula 63 4e-76 281
WERAM-Aet-0106 EMT19247 Aegilops tauschii 61 8e-76 280
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 64 5e-75 278
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 64 3e-74 275
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 65 2e-73 273
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 65 1e-69 260
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 2e-66 249
Created Date 25-Jun-2016