WERAM Information

Tag Content
WERAM ID WERAM-Bro-0177
Ensembl Protein ID Bo9g072730.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo9g072730 Bo9g072730.1 Bo9g072730.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.90e-13 49.9 190 239
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   +C +Cg++d  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bo9g072730.1 190 VCGACGDSDGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCSN 239
                   8****999999999*******************555554479******86 PP
Protein Sequence
(Fasta)		MEVITHPTPR TVDEVFTDLR GRRAGLIKAL TTDMVKFYQT CDPEKENLCL YGLPNETWEV 60
NLPVEEVPPE LPEPALGINF ARDGMQEKDW VSLVAVHSDS WLLSVAFYFG ARFGFGKNER 120
KKLFQMINEL PTIFEIVTGN AKQSKDLSGN NNTSSKSKSN GLKVPKMSSP PPKEEDESED 180
EDEDDEQGAV CGACGDSDGT DEFWICCDAC EKWFHGKCVK ITPAKAEHIK HYKCPSCSNK 240
RARP 244
Nucleotide Sequence
(Fasta)		ATGGAGGTAA TCACTCATCC AACACCTCGA ACTGTCGATG AGGTCTTTAC TGACTTAAGA 60
GGTCGACGAG CTGGTCTTAT CAAGGCTCTC ACCACCGATA TGGTGAAGTT TTACCAAACG 120
TGTGATCCTG AGAAAGAGAA CTTGTGCCTC TATGGACTTC CTAATGAGAC ATGGGAGGTT 180
AATCTTCCCG TCGAGGAAGT TCCTCCTGAG CTTCCTGAAC CTGCTTTAGG CATCAATTTC 240
GCTAGAGACG GGATGCAAGA AAAGGACTGG GTGTCTCTGG TCGCTGTTCA CAGTGATTCC 300
TGGCTGCTTT CTGTTGCCTT CTACTTTGGT GCACGTTTTG GGTTTGGTAA GAATGAGAGG 360
AAGAAGCTCT TCCAGATGAT AAACGAGCTC CCAACCATTT TCGAGATTGT AACGGGCAAT 420
GCAAAGCAAT CCAAGGATCT ATCTGGTAAC AACAACACCA GTAGCAAAAG CAAATCCAAC 480
GGCTTGAAGG TACCAAAGAT GTCATCTCCA CCGCCTAAAG AAGAAGATGA GAGTGAGGAC 540
GAGGATGAAG ACGATGAACA AGGTGCGGTG TGTGGCGCCT GTGGAGACAG TGACGGTACA 600
GATGAGTTCT GGATCTGCTG TGACGCCTGC GAGAAGTGGT TCCATGGGAA ATGTGTGAAG 660
ATAACACCTG CTAAGGCAGA ACACATCAAG CACTACAAAT GCCCAAGCTG CAGTAACAAG 720
AGAGCCAGGC CTTGA 736
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 100 3e-113 404
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 86 5e-103 370
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 84 2e-102 369
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 76 2e-93 338
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 77 5e-93 337
WERAM-Prp-0081 EMJ24886 Prunus persica 77 4e-90 328
WERAM-Thc-0075 EOY26404 Theobroma cacao 77 2e-89 325
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 77 2e-88 322
WERAM-Met-0117 KEH32736 Medicago truncatula 73 2e-88 322
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 74 4e-85 311
WERAM-Sol-0018 Solyc01g102760.2.1 Solanum lycopersicum 74 4e-85 311
WERAM-Amt-0088 ERM99796 Amborella trichopoda 70 7e-81 297
WERAM-Sei-0086 Si023009m Setaria italica 66 1e-78 289
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 68 1e-78 289
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 66 2e-78 289
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 64 2e-77 285
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 69 4e-77 284
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 69 4e-77 284
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 69 4e-77 284
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 69 4e-77 284
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 69 4e-77 284
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 69 4e-77 284
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 69 4e-77 284
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 5e-77 284
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 66 6e-77 284
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 66 9e-77 283
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 70 1e-76 283
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 66 2e-76 282
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 63 2e-76 282
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 65 6e-76 280
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 65 3e-73 271
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 66 9e-71 263
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 69 3e-70 261
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 63 2e-68 255
Created Date 25-Jun-2016