WERAM Information

Tag Content
WERAM ID WERAM-Brr-0091
Ensembl Protein ID Bra017415.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra017415 Bra017415.1 Bra017415.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.50e-13 49.9 190 239
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C +Cg++d  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  Bra017415.1-P 190 VCGACGDSDGTDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCSN 239
                    8****999999999*******************555554479******86 PP
Protein Sequence
(Fasta)		MEVITHPTPR TVDEVFTDFR GRRAGLIKAL TTDMVKFYQT CDPEKENLCL YGLPNETWEV 60
NLPVEEVPPE LPEPALGINF ARDGMQEKDW VSLVAVHSDS WLLSVAFYFG ARFGFGKNER 120
KKLFQMINEL PTIFEIVTGN AKQSKDLSGN NNTSSKSKSN GLKVPKMSSP PPKEEDESED 180
EDEDDEQGAV CGACGDSDGT DEFWICCDAC EKWFHGKCVK ITPAKAEHIK HYKCPSCSNK 240
RARP 244
Nucleotide Sequence
(Fasta)		ATGGAGGTAA TCACTCATCC AACACCTCGA ACTGTCGATG AGGTCTTTAC TGACTTCAGA 60
GGTCGTCGAG CTGGTCTTAT CAAGGCTCTT ACTACCGATA TGGTGAAGTT TTACCAAACG 120
TGCGATCCTG AGAAAGAGAA CTTGTGCCTC TATGGACTTC CTAATGAGAC ATGGGAGGTT 180
AATCTTCCCG TCGAGGAAGT TCCTCCTGAG CTTCCTGAAC CTGCTTTGGG CATCAATTTC 240
GCTAGAGACG GGATGCAAGA AAAGGACTGG GTGTCTCTGG TCGCTGTTCA CAGTGATTCC 300
TGGCTGCTTT CTGTTGCCTT TTACTTTGGT GCACGTTTTG GGTTTGGTAA GAATGAGAGG 360
AAGAAGCTCT TCCAGATGAT CAATGAGCTC CCAACTATTT TCGAGATTGT GACGGGCAAT 420
GCAAAGCAAT CCAAGGATCT ATCTGGTAAC AACAACACCA GTAGCAAAAG CAAATCCAAC 480
GGTTTAAAGG TACCAAAGAT GTCATCTCCA CCGCCTAAAG AAGAAGATGA GAGTGAGGAC 540
GAGGATGAAG ACGATGAACA AGGTGCGGTG TGTGGCGCCT GTGGAGACAG TGACGGTACA 600
GATGAGTTCT GGATTTGCTG TGACGCCTGC GAGAAGTGGT TCCATGGGAA ATGTGTGAAG 660
ATAACACCTG CTAAGGCAGA ACACATCAAG CACTACAAAT GCCCAAGCTG CAGTAACAAG 720
AGAGCCAGGC CTTGA 736
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 100 3e-113 404
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 86 2e-103 372
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 85 6e-103 370
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 77 8e-94 340
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 78 1e-93 339
WERAM-Prp-0081 EMJ24886 Prunus persica 78 1e-90 329
WERAM-Thc-0075 EOY26404 Theobroma cacao 77 8e-90 327
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 77 7e-89 323
WERAM-Met-0117 KEH32736 Medicago truncatula 73 1e-88 323
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 74 9e-86 313
WERAM-Sol-0018 Solyc01g102760.2.1 Solanum lycopersicum 75 1e-85 313
WERAM-Amt-0088 ERM99796 Amborella trichopoda 70 2e-81 299
WERAM-Sei-0086 Si023009m Setaria italica 66 4e-79 291
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 68 5e-79 291
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 67 6e-79 290
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 65 6e-78 287
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 1e-77 286
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 69 1e-77 286
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 69 1e-77 286
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 69 1e-77 286
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 69 1e-77 286
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 69 1e-77 286
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 69 1e-77 286
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 69 1e-77 286
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 67 2e-77 286
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 66 2e-77 285
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 70 3e-77 285
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 64 5e-77 284
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 69 1e-76 283
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 66 2e-76 282
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 65 7e-73 270
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 67 3e-71 265
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 69 3e-70 261
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 6e-69 257
Created Date 25-Jun-2016