WERAM Information

Tag Content
WERAM ID WERAM-Viv-0077
Ensembl Protein ID VIT_12s0035g01980.t01
Gene Name VIT_12s0035g01980
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_12s0035g01980 VIT_12s0035g01980.t01 VIT_12s0035g01980.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.20e-13 49.8 198 248
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                             iC +Cg+++++++++++Cd C++wfH+kCvk++  +++  k++ Cp C +
  VIT_12s0035g01980.t01 198 AICGACGDNYANDEFWICCDVCEKWFHGKCVKITPAKAEHIKQYKCPGCSN 248
                            58********************************555554479******86 PP
Protein Sequence
(Fasta)		MEGLPPHPVP RTVEEVFSDY RGRRAGLIKA LTTEVEKFYQ QCDPEKENLC LYGLPNETWE 60
VNLPVEEVPP ELPEPALGIN FARDGMQEKD WLSLVAVHSD SWLLAVAFYF GARFGFGKSE 120
RKRLFQMINE LPTIFEVVTG VKQQRDMSGN HNNSNKSKSS GKMSRQPEPQ TKGVKVSPPS 180
KEEDESGDED AEDDEQGAIC GACGDNYAND EFWICCDVCE KWFHGKCVKI TPAKAEHIKQ 240
YKCPGCSNKR ARV 253
Nucleotide Sequence
(Fasta)		ATTGAGAAAA ATTGAGAGAA ATTGAGAGGA GAAATCAACC CAAATTTATC ATTTAAAAAA 60
AAAAAAAAAA AGAGAAAGGA AATTCATTCA AATTTATACA AATTTCCCAA TTCCATTTCC 120
TTCAATTCAC AACAAATTGA TTGTTTGATA GTGAGAAGAG GGACCCTTTT CCCCAAATTT 180
GTTTGTGAAA CGGGAAGAAG AAAGAAACCC TAGAAAAGGG GTAGGGTTTG TCTGAATTGT 240
GTTGTAAGAA TTGGAATTGA ATAAGCCCCA AAGTTGAGAG GAATGGAGGG ACTGCCACCA 300
CACCCGGTAC CCAGAACTGT TGAAGAGGTC TTCAGCGATT ACAGAGGCAG ACGTGCCGGC 360
TTGATCAAGG CCCTCACCAC CGAAGTTGAA AAGTTCTACC AGCAGTGCGA TCCTGAGAAG 420
GAGAACTTGT GTCTGTATGG ACTTCCAAAT GAGACATGGG AAGTTAACCT GCCTGTTGAG 480
GAGGTACCTC CTGAGCTTCC AGAACCAGCA TTAGGTATAA ACTTTGCTAG GGATGGGATG 540
CAAGAGAAAG ACTGGTTATC ACTGGTTGCT GTGCACAGTG ATTCATGGTT GCTTGCTGTT 600
GCATTCTATT TTGGTGCCCG CTTTGGGTTT GGTAAGAGTG AAAGGAAGAG GCTTTTCCAG 660
ATGATAAACG AGCTTCCAAC CATATTTGAA GTTGTGACAG GAGTTAAGCA ACAAAGAGAT 720
ATGTCTGGTA ATCACAACAA CAGCAACAAA AGCAAATCAA GTGGGAAGAT GTCTCGGCAA 780
CCTGAACCCC AGACCAAGGG AGTAAAGGTG TCTCCTCCAT CCAAGGAAGA AGACGAGAGT 840
GGGGACGAAG ATGCTGAAGA TGATGAACAA GGAGCCATCT GTGGAGCTTG TGGGGATAAC 900
TATGCTAATG ATGAATTCTG GATTTGCTGT GACGTGTGTG AGAAATGGTT CCATGGCAAA 960
TGTGTTAAGA TTACACCTGC AAAGGCTGAG CATATCAAGC AATACAAGTG CCCGGGTTGC 1020
AGTAACAAAA GGGCTAGAGT TTAAAATCTA GGTTTTGAGG TTGGAGAGAA ACATCAATTG 1080
AACAAAAGAC ATCTAAGGGT TAGAAACTTT TTGGATACTA TTTGCAAGTG AGGAAAGACA 1140
AGACAGTGCT CCATTTTAGT TACGAATTAG AATGCCTGCA GATGGGATTT TTATTTTGCT 1200
ACTCTTTTCT GTTACCTGCT TTATCATGAG ATAATTGGGA ATTGTGTTTT CAAATACTTC 1260
TTAACCAAGA CATGATATAT AACAGTTTCC TGC 1294
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 85 3e-99 358
WERAM-Prp-0081 EMJ24886 Prunus persica 86 4e-99 358
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 81 9e-99 356
WERAM-Thc-0075 EOY26404 Theobroma cacao 86 1e-98 356
WERAM-Met-0117 KEH32736 Medicago truncatula 81 2e-98 355
WERAM-Sol-0018 Solyc01g102760.2.1 Solanum lycopersicum 80 3e-95 345
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 80 8e-95 343
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 80 7e-94 340
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 79 1e-92 336
WERAM-Amt-0088 ERM99796 Amborella trichopoda 74 2e-90 329
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 72 1e-89 326
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 75 4e-88 321
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 75 8e-88 320
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 70 3e-84 308
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 70 4e-84 308
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 70 4e-84 308
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 70 4e-84 308
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 70 4e-84 308
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 70 4e-84 308
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 70 4e-84 308
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 70 4e-84 308
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 70 4e-84 308
WERAM-Brd-0098 BRADI4G21040.1 Brachypodium distachyon 71 1e-83 306
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 71 4e-83 305
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 71 5e-83 304
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 71 1e-82 303
WERAM-Sei-0086 Si023009m Setaria italica 67 3e-81 298
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 67 4e-81 298
WERAM-Aet-0106 EMT19247 Aegilops tauschii 68 1e-79 293
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 68 1e-78 290
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 72 1e-76 283
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 66 6e-76 281
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 65 3e-75 278
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 67 6e-72 267
Created Date 25-Jun-2016