WERAM Information

Tag Content
WERAM ID WERAM-Pot-0035
Ensembl Protein ID POPTR_0003s04070.1
Gene Name POPTR_0003s04070g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0003s04070 POPTR_0003s04070.1 POPTR_0003s04070.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.20e-12 48.1 200 248
Organism Populus trichocarpa
Domain Profile
  Me_Reader PHD
             PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                         +C +Cg+++  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC 
  POPTR_0003s04070.1 200 TCGACGESYGTDEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCS 248
                         7****999999999*******************555554479******7 PP
Protein Sequence
(Fasta)		MEAIPHPIPR TVEEVFSDFK GRRSGLIKAL TTDVEKFYQQ CDPDKENLCL YGLPNETWEV 60
NLPVEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDS WLLAVAFYFG ARFGFGKNER 120
KRLFQMINEL PTIFEVVSGN VKQPKDQSAT HNNSGKSKSS GKMQSRQPES QTKAVKVSAP 180
PKEDYESGEE EEEDDEQGAT CGACGESYGT DEFWICCDIC EKWFHGKCVK ITPAKAEHIK 240
QYKCPSCSGK RARV 254
Nucleotide Sequence
(Fasta)		AAAAAGAGTC CGTCTATCTT CGCCCACAAA TTATATCGGA AAAAATTAAG ACAGGGAAAC 60
GAAAACGAGA GAGCAGGGAA CTCTATGAGT ATGAGGAACA AGCAAAATTC CCATTAACCA 120
GCACCCGAAA ACCCTAATTA ATTCCTTCCT TCCTTCAACT AAGACCCAAT AAACTGCATT 180
ATGATCATTA TCTAATTTTG TAGACAGATA GAGATTGTGA ATGGAGGCAA TACCGCACCC 240
AATACCGCGA ACTGTTGAAG AAGTTTTTAG TGATTTTAAA GGAAGACGCT CTGGTTTAAT 300
CAAGGCTCTC ACTACCGATG TTGAGAAGTT TTACCAGCAG TGTGACCCTG ATAAGGAGAA 360
CTTGTGCCTA TATGGACTCC CAAATGAAAC ATGGGAAGTT AATCTGCCTG TGGAGGAGGT 420
GCCTCCTGAG CTTCCTGAGC CTGCACTAGG TATAAATTTT GCTAGGGATG GGATGCAAGA 480
GAAAGACTGG TTATCCCTTG TTGCAGTTCA CAGCGATTCA TGGTTGCTTG CTGTTGCATT 540
TTATTTTGGT GCACGTTTTG GGTTTGGGAA GAATGAAAGG AAGAGGCTTT TCCAGATGAT 600
AAATGAGCTC CCCACAATAT TCGAGGTTGT GTCCGGAAAT GTTAAGCAAC CTAAGGACCA 660
ATCTGCCACT CACAACAACA GTGGCAAAAG CAAATCAAGC GGGAAGATGC AATCCCGGCA 720
ACCTGAGTCC CAGACTAAGG CAGTAAAGGT ATCTGCACCA CCCAAGGAAG ACTATGAGAG 780
TGGGGAAGAG GAAGAAGAAG ATGACGAACA GGGTGCTACT TGCGGAGCAT GTGGTGAAAG 840
CTATGGCACT GATGAATTCT GGATTTGCTG TGATATTTGC GAGAAATGGT TCCATGGGAA 900
ATGCGTCAAG ATTACACCTG CCAAAGCTGA GCATATCAAG CAGTACAAGT GCCCAAGTTG 960
CAGTGGCAAG AGGGCTAGAG TTTAAAGTTA GATGCTGAAG TCGAAGATGG ACATCACTTA 1020
AACAAAGCAG ACAAGGGGTA GAACTTTTTC TTTAACGTTT TAAAGTTGAT CAGAGCCAGT 1080
TGCCTACTTT AGTCAATGAA TTCGAATGAC TGCAGATTGG ATTTTTAAGT TTGGCTACTC 1140
ATGGTTCCTT CTGTCAATCT TTCTTGGGAA TTGTGTTTCT GAATAGCCGG TGGCAACTAT 1200
AGCTATTCTA TTTATATGTT GCTGCATTTT TTTGGTTTGC GTG 1244
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 87 5e-108 387
WERAM-Thc-0075 EOY26404 Theobroma cacao 85 2e-105 379
WERAM-Prp-0081 EMJ24886 Prunus persica 85 2e-105 379
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 86 1e-104 376
WERAM-Met-0117 KEH32736 Medicago truncatula 82 1e-103 373
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 81 3e-101 365
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 79 7e-101 363
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 83 4e-97 351
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 82 4e-97 351
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 76 1e-96 349
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 76 5e-96 347
WERAM-Amt-0088 ERM99796 Amborella trichopoda 78 4e-91 331
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 72 5e-87 317
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 69 9e-84 306
WERAM-Sei-0086 Si023009m Setaria italica 69 2e-83 305
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 73 1e-81 300
WERAM-Zem-0090 GRMZM2G158918_P01 Zea mays 68 1e-81 300
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 73 2e-81 299
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 2e-81 299
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 73 2e-81 299
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 73 2e-81 299
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 73 2e-81 299
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 73 2e-81 299
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 73 2e-81 299
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 73 2e-81 299
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 73 2e-81 299
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 73 2e-81 299
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 66 9e-81 296
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 74 1e-80 296
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 68 2e-80 296
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 70 4e-77 285
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 67 7e-76 280
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 73 2e-74 276
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 65 2e-73 272
Created Date 25-Jun-2016