WERAM Information

Tag Content
WERAM ID WERAM-Brd-0086
Ensembl Protein ID BRADI3G46110.1
Gene Name BRADI3G46110.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
BRADI3G46110 BRADI3G46110.1 BRADI3G46110.1
BRADI3G46110 BRADI3G46110.3 BRADI3G46110.3
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.50e-11 43.4 204 253
Organism Brachypodium distachyon
Domain Profile
  Me_Reader PHD
         PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                     +C  Cg+++++ +++++Cd C++wfH+kCv ++  +++  k++ Cp C  
  BRADI3G46110.1 204 LCGSCGETYANGEFWICCDICEKWFHGKCVRITPAKAEHIKHYKCPACSS 253
                     7**********99********************555554479******75 PP
Protein Sequence
(Fasta)		MDDAGGGLAS AAVHHNARSP EDVFRDYRAR RAGIVKALTT DVEKFYQQCD PEKENLCLYG 60
LPNETWEVTL PAEEVPPELP EPALGINFAR DGMIEKDWLS LVAVHSDAWL LSVAFYFGAR 120
FGFDKEARRR LFTMVNGLPT VYEIVTGVAK KQPKPSNGGS KSSKSNSKPS RQSNSNSKPA 180
KLSHPKDEED NGQEDAQDEE QAYLCGSCGE TYANGEFWIC CDICEKWFHG KCVRITPAKA 240
EHIKHYKCPA CSSKRSRE 258
Nucleotide Sequence
(Fasta)		TTTTTGCGGT TTGTGCTTCC CCAATCCCCC CTCCCATTCT CCAGTCTCCA CTACCGGACC 60
ACCACCACAC TCGCTCCCTT CCTCCTCCGC CCCAAACCCT AGCCGTAGGC GACTATCGCC 120
TCGGATGGAT GACGCAGGAG GCGGCTTGGC GTCGGCGGCC GTGCACCACA ACGCGCGCTC 180
CCCCGAGGAC GTCTTCCGCG ACTACCGTGC GCGCCGCGCA GGAATCGTCA AGGCGCTCAC 240
CACGGATGTG GAGAAGTTCT ACCAACAGTG CGACCCCGAG AAAGAGAACC TCTGCCTTTA 300
TGGGTTACCC AATGAAACCT GGGAAGTGAC ACTGCCAGCT GAGGAAGTAC CTCCTGAACT 360
TCCAGAACCA GCTTTGGGAA TTAACTTTGC TCGTGATGGG ATGATCGAAA AAGATTGGTT 420
GTCGCTGGTT GCAGTTCATA GTGATGCCTG GCTGCTATCT GTTGCATTTT ACTTTGGAGC 480
TCGGTTCGGA TTTGATAAAG AAGCCAGGAG ACGGCTCTTC ACCATGGTTA ATGGTCTTCC 540
CACTGTCTAT GAAATTGTGA CGGGAGTTGC CAAGAAGCAA CCAAAACCCT CCAATGGTGG 600
TAGCAAGAGC AGCAAATCCA ACTCTAAACC ATCAAGACAG TCCAATTCTA ACAGCAAGCC 660
TGCAAAGCTG TCTCATCCAA AAGATGAGGA AGACAATGGG CAAGAGGATG CACAGGACGA 720
GGAGCAGGCA TACCTGTGTG GCTCCTGCGG GGAGACCTAC GCGAATGGCG AATTCTGGAT 780
ATGCTGTGAC ATTTGCGAGA AGTGGTTCCA CGGCAAGTGT GTCCGGATCA CCCCTGCAAA 840
GGCGGAGCAC ATCAAGCACT ACAAGTGCCC CGCCTGTAGC AGCAAGAGGA GCCGAGAATG 900
AAGCTCCTTT AGAATGGTTA GGAATGGTGA AGCGGCAGAG ACCCTGCCGT GAACCGGCTC 960
GCCGGTTTGT TGTACTAGTT TCAACTCATT GTTGTGTGGG ACATGGCAAC TAGTGGTATC 1020
TAGCAGTCTA ACTGCTTTCA TGGTAGTGTG ATGTGTAACT GTTGACAGCA CCGTGTTCAG 1080
TAATGAGGTG CTGGGTTAGT GTGTAACTGT GTGTGATATG TTAATGCCTA CCTGACGTTG 1140
TTATTCCTCC AAGCTCTTGG GCTGTTGTTA CTAA 1175
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0072 Sb04g023220.1 Sorghum bicolor 88 5e-107 384
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 89 7e-105 377
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 89 1e-103 373
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 89 1e-103 373
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 89 1e-103 373
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 89 1e-103 373
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 89 1e-103 373
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 89 1e-103 373
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 89 3e-103 372
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 88 4e-103 371
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 89 4e-103 371
WERAM-Orbr-0027 OB02G28450.1 Oryza brachyantha 88 9e-102 367
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 82 1e-101 366
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 69 1e-88 323
WERAM-Sei-0038 Si010902m Setaria italica 73 8e-87 317
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 68 4e-85 311
WERAM-Orl-0073 KN539572.1_FGP001 Oryza longistaminata 89 3e-81 298
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 69 3e-80 295
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 69 1e-79 293
WERAM-Thc-0077 EOY27191 Theobroma cacao 67 3e-79 291
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 67 3e-78 288
WERAM-Amt-0088 ERM99796 Amborella trichopoda 68 7e-78 287
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 69 3e-77 285
WERAM-Prp-0081 EMJ24886 Prunus persica 66 1e-75 280
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 65 1e-75 280
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 64 3e-75 278
WERAM-Met-0117 KEH32736 Medicago truncatula 67 3e-75 278
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 7e-75 277
WERAM-Brr-0091 Bra017415.1-P Brassica rapa 66 9e-75 276
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 2e-74 276
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 66 2e-74 275
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 67 6e-72 267
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 61 8e-68 254
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 9e-65 243
Created Date 25-Jun-2016