WERAM Information

Tag Content
WERAM ID WERAM-Brr-0124
Ensembl Protein ID Bra024817.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra024817 Bra024817.1 Bra024817.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 8.50e-13 49.3 192 241
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C +Cg+++  ++++++Cd C++wfH++Cvk++  +++  k++ CpsC++
  Bra024817.1-P 192 VCGACGDNYGTDEFWICCDACEKWFHGRCVKITPAKAEHIKHYKCPSCTN 241
                    8****999999999*******************555554479******97 PP
Protein Sequence
(Fasta)		MEGSNIITQH TPRTVEEVFS DFRGRRAGLI KALTIDMVKF YQTCDPEKEN FCLYGLPNET 60
WEVNLPAEEV PPELPEPALG INFARDGMQE KDWVSLVAVH SDSWLLSVAF YFGARFGFVK 120
NERKRLFQMI NDLPTIFEVV TGNAKQSKDH SGTNNNNSIS KPSGLKVSKM MSSPPPKEED 180
ESEDEEEEQG AVCGACGDNY GTDEFWICCD ACEKWFHGRC VKITPAKAEH IKHYKCPSCT 240
NKRARP 246
Nucleotide Sequence
(Fasta)		ATGGAGGGGA GTAATATTAT TACTCAACAT ACACCTCGAA CTGTGGAAGA GGTCTTTAGC 60
GACTTCAGAG GTCGACGAGC TGGTCTCATT AAGGCTCTCA CTATCGATAT GGTGAAGTTT 120
TACCAAACAT GCGATCCTGA GAAGGAGAAC TTTTGTCTGT ATGGACTTCC AAATGAGACT 180
TGGGAGGTTA ATCTTCCCGC CGAGGAAGTT CCTCCTGAGC TTCCTGAACC AGCTCTAGGC 240
ATCAATTTCG CTAGAGACGG CATGCAGGAA AAGGACTGGG TTTCTTTGGT CGCTGTTCAC 300
AGTGATTCTT GGCTGCTTTC TGTTGCCTTC TACTTTGGTG CACGTTTCGG GTTTGTTAAG 360
AATGAGAGGA AGAGACTTTT CCAGATGATA AACGATCTTC CAACCATTTT CGAGGTTGTG 420
ACAGGCAATG CAAAGCAATC CAAAGATCAT TCTGGTACCA ACAACAACAA TAGCATAAGC 480
AAACCTAGTG GCTTGAAGGT TTCGAAGATG ATGTCATCTC CACCGCCTAA AGAAGAAGAT 540
GAGAGTGAAG ACGAGGAGGA GGAACAAGGT GCGGTTTGTG GCGCTTGTGG AGACAACTAC 600
GGTACAGATG AGTTTTGGAT ATGCTGCGAC GCGTGTGAGA AATGGTTCCA TGGAAGATGT 660
GTGAAGATAA CACCTGCTAA AGCAGAGCAC ATCAAGCACT ACAAATGCCC CAGTTGCACT 720
AACAAGAGAG CCAGACCTTG A 742
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 85 6e-103 370
WERAM-Art-0035 AT2G02470.1 Arabidopsis thaliana 82 2e-102 369
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 83 5e-102 367
WERAM-Prp-0081 EMJ24886 Prunus persica 75 2e-93 338
WERAM-Glm-0084 GLYMA07G40165.1 Glycine max 75 3e-93 338
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 74 2e-92 335
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 73 1e-90 329
WERAM-Met-0117 KEH32736 Medicago truncatula 71 1e-89 326
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 76 2e-89 325
WERAM-Thc-0075 EOY26404 Theobroma cacao 72 3e-89 325
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 74 7e-89 323
WERAM-Amt-0088 ERM99796 Amborella trichopoda 70 1e-84 309
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 72 7e-83 303
WERAM-Orr-0054 ORUFI05G17990.1 Oryza rufipogon 69 3e-81 298
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 66 1e-80 296
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 69 2e-80 296
WERAM-Sei-0086 Si023009m Setaria italica 65 5e-80 294
WERAM-Ors-0048 OS05T0419100-01 Oryza sativa 65 8e-80 293
WERAM-Orni-0049 ONIVA05G17440.1 Oryza nivara 65 8e-80 293
WERAM-Orm-0051 OMERI05G14570.1 Oryza meridionalis 65 8e-80 293
WERAM-Ori-0060 BGIOSGA019887-PA Oryza indica 65 8e-80 293
WERAM-Orgl-0053 OGLUM05G17790.1 Oryza glumaepatula 65 8e-80 293
WERAM-Org-0052 ORGLA05G0145200.1 Oryza glaberrima 65 8e-80 293
WERAM-Orb-0052 OBART05G16780.1 Oryza barthii 65 8e-80 293
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 63 9e-80 293
WERAM-Orp-0050 OPUNC05G14790.1 Oryza punctata 65 9e-80 293
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 71 1e-79 293
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 65 2e-79 292
WERAM-Aet-0106 EMT19247 Aegilops tauschii 64 2e-77 285
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 64 2e-77 285
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 2e-74 275
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 62 8e-74 273
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 64 2e-71 265
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 70 2e-71 265
Created Date 25-Jun-2016