WERAM Information

Tag Content
WERAM ID WERAM-Glm-0204
Ensembl Protein ID GLYMA16G00680.1
Gene Name GLYMA_16G005400
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA16G00680 GLYMA16G00680.1 GLYMA16G00680.1
GLYMA16G00680 GLYMA16G00680.2 GLYMA16G00680.2
GLYMA16G00680 GLYMA16G00680.3 GLYMA16G00680.3
GLYMA16G00680 GLYMA16G00680.4 GLYMA16G00680.4
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.30e-12 47.1 198 248
Organism Glycine max
Domain Profile
  Me_Reader PHD
          PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                      t+C +Cg+++  ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  GLYMA16G00680.1 198 TLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 248
                      78****999999999*******************666664479******86 PP
Protein Sequence
(Fasta)		MDSRTYNPRT VEEVFRDFKG RRAGLIKALT TDVEDFYNQC DPEKENLCLY GFPSEQWEVN 60
LPAEEVPPEL PEPVLGINFA RDGMQEKDWL SLVAVHSDAW LLAIAFYFGA RFGFDKADRK 120
RLFNMINELP TIFEVVTGAA KKQVKEKSSV SNHSGSKSKS SSKAQRAPES QSRQSKPLQP 180
KDEDEELDDQ DDDEHGETLC GACGEHYGTD EFWICCDICE KWFHGKCVKI TPARAEHIKQ 240
YKCPSCSNKR ARP 253
Nucleotide Sequence
(Fasta)		GAGTACTCGA GATTTTATTT CCAATTTTTC GAGTTTCGAC CAAAAATATT AATTGAAAAA 60
TTATAATTGT AAATAAAGAA GGAGAAATAA AAAGGAAGAG TTTTTCGCTG TTGTTGTTGT 120
TGTTGTTTGT TGTTGCATTT TTTGCACTTG CAAAATTTTG GTTGCAGAGG CAGAGAGAGG 180
AGGCAACGCC ACACCGCACC ACTCTCACTC TGCAACACCC GAATCTCGTT TCACCTAAAC 240
GACCTCGTTT TTGCGTTCTT TTCCCTTTTC TTCTTCTGAT TTAGGTTTCA GAGAGAAGAA 300
GAAGGAGCAG CAATGGACTC TCGCACGTAT AATCCTCGCA CCGTCGAAGA GGTTTTTAGG 360
GATTTCAAGG GCCGAAGAGC TGGTCTCATC AAAGCCCTAA CCACCGATGT TGAAGATTTC 420
TACAACCAAT GTGATCCTGA GAAGGAGAAT TTGTGCTTGT ATGGCTTTCC CAGTGAGCAG 480
TGGGAAGTAA ATTTACCTGC TGAAGAAGTA CCACCAGAGC TTCCTGAGCC CGTACTGGGC 540
ATTAACTTTG CTAGGGATGG CATGCAAGAA AAAGACTGGC TATCTTTAGT TGCTGTTCAT 600
AGTGATGCAT GGTTGCTTGC TATTGCATTC TATTTTGGAG CCAGATTTGG GTTTGATAAA 660
GCTGACAGGA AACGGCTTTT CAACATGATC AATGAACTGC CAACAATATT TGAAGTTGTT 720
ACTGGTGCAG CAAAAAAGCA AGTTAAGGAG AAGTCTTCAG TTTCAAACCA CAGTGGCAGC 780
AAGTCTAAGT CCAGCTCTAA GGCACAGCGG GCTCCAGAAT CTCAGAGTAG ACAGTCAAAG 840
CCATTGCAAC CAAAAGATGA GGATGAAGAA CTGGACGATC AAGATGATGA TGAACATGGA 900
GAGACCTTGT GTGGGGCATG TGGTGAGCAC TATGGCACTG ATGAATTCTG GATTTGCTGT 960
GACATCTGCG AGAAGTGGTT CCATGGTAAA TGTGTGAAGA TCACCCCTGC TAGGGCAGAG 1020
CATATCAAGC AATACAAGTG CCCATCTTGC AGTAACAAGA GAGCTCGGCC CTGATTGACA 1080
TGAGCCAAGT TCCATCATTG ACAATCATTG TTGGACCCTG TTATTCTGCT TTTCTTCCTA 1140
GATGTTGCAG TTAATGGATA GTTTCTGTTT GACTTGTGTA GGTTTCTTTT TCTAGTCTGT 1200
AGGATTCTGC TGTGTTGGTT TCGTTAGTAT CAGCTGCAAT TCAGTTGATG CCTTCTTGGA 1260
TTTGATCAAT TTGTAGTTTA TGCATTGTTG ACTTGGGAAA GTGAAGTCTT TTCCTTAATG 1320
TCACTCTAAA ACTAGGTTAA TGAAACAAAT TTATTTGAAA TGGATGTCTA GTTATGTCAT 1380
TGTTGCTAGT TTGCTACCCT CCCCCAACAC CAAAGGTGAA GTTCTTGGGC ATAAAGTTTT 1440
TGCATGCTGG ATATGTACAT TCTCATTTCT AACTAGAGAA TTTCTACATT GTTGGGTCGG 1500
CTTGGAAGTT CTTATTCCCA TAATGGAGTT GATCATATTT TGAGCTTTGC ATTGGGTAAA 1560
AAAGTGGCTA AGCTAATGTT TGCGGGATAC AATTCTTTCT ATTTTATTTA GTTAATGAGT 1620
GCATGCTTCA TATCTTACAA AGCTTGAATA GTTCATGTGA GACCATTTGC CAAAGGATTA 1680
ATGCTCACGA GACCAGCATT TTCGGAAATG TGACTCAAAA TATTTGATG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0172 KEH18446 Medicago truncatula 91 7e-102 367
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 84 2e-97 352
WERAM-Thc-0077 EOY27191 Theobroma cacao 88 2e-97 352
WERAM-Prp-0082 EMJ27202 Prunus persica 81 2e-97 352
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 87 2e-97 352
WERAM-Amt-0032 ERN11177 Amborella trichopoda 82 5e-94 341
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 77 3e-93 338
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 77 3e-90 328
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 79 2e-89 325
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 75 1e-88 323
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 77 1e-88 323
WERAM-Sei-0118 Si030765m Setaria italica 68 4e-88 321
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 75 1e-86 316
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 72 4e-86 314
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 72 1e-85 313
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 69 2e-84 309
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 69 2e-84 309
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 69 2e-84 309
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 69 2e-84 309
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 69 2e-84 309
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 69 2e-84 309
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 69 2e-84 309
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 69 2e-84 309
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 69 5e-84 307
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 66 1e-82 303
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 70 2e-82 302
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 74 2e-82 302
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 69 3e-82 302
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 69 1e-81 300
WERAM-Aet-0106 EMT19247 Aegilops tauschii 68 2e-81 299
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 68 3e-81 298
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 70 4e-81 298
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 69 2e-75 279
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 70 6e-75 277
Created Date 25-Jun-2016