WERAM Information

Tag Content
WERAM ID WERAM-Sot-0075
Ensembl Protein ID PGSC0003DMT400059399
Gene Name PGSC0003DMG400023078
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400023078 PGSC0003DMT400059399 PGSC0003DMT400059399
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.30e-12 46.7 186 235
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                           t+C  Cg ++  +++++ Cd C++w+H+kCvk++  ++++ k++ CpsC+
  PGSC0003DMT400059399 186 TLCGSCGGNYSADEFWIGCDICEKWYHGKCVKITPAKAESIKQYKCPSCT 235
                           78****999999999*******************555554489******7 PP
Protein Sequence
(Fasta)		MASISSSPRS VEEIFKDYSA RRVGILRALT DDVDEFYNLC DPEKENLCLY GHPNETWEVN 60
LPAEEVPPEL PEPALGINFA RDGMNRRDWL SLVAVHSDCW LLSVAFYFGA RLNRNERKRL 120
FSLINEVPTV FEVVTERKPI KDKPSADSGS KSRGSSIKRS SDGQVKSTPK LEDESYQEDE 180
EEHGETLCGS CGGNYSADEF WIGCDICEKW YHGKCVKITP AKAESIKQYK CPSCTLKRSR 240
Q 241
Nucleotide Sequence
(Fasta)		TCCTACTCCC ACAATTATAA GCTATCTCAT TTGCCTTTAA TTTTTCGAAA AATTATAATA 60
TCAGTTCCCA GTAATTTTTC CTCCTTCTTT TGTTAGATCT CAGAATAAAT TGTTGTTGAG 120
GTACAAAAAT GGCCTCAATT TCTTCAAGTC CTCGAAGTGT AGAAGAGATC TTCAAAGATT 180
ACAGTGCTCG TCGTGTTGGG ATACTTCGTG CTTTAACTGA TGATGTGGAT GAATTCTATA 240
ATCTCTGTGA TCCAGAGAAG GAAAATTTGT GTCTTTATGG ACATCCAAAT GAAACTTGGG 300
AAGTCAACCT TCCTGCGGAG GAAGTTCCAC CTGAGCTGCC AGAGCCAGCA CTTGGGATAA 360
ATTTTGCTAG GGATGGAATG AATCGTAGAG ATTGGCTATC CCTGGTTGCT GTTCACAGTG 420
ATTGTTGGTT GCTTTCTGTG GCTTTCTATT TTGGAGCTCG TCTTAATCGA AACGAAAGGA 480
AGCGTCTATT CAGCTTGATC AATGAGGTGC CGACTGTCTT TGAAGTTGTG ACCGAAAGAA 540
AACCTATAAA AGATAAGCCC AGTGCAGATA GTGGGAGCAA ATCACGTGGT AGTAGCATAA 600
AGAGATCTAG TGATGGTCAG GTGAAAAGCA CCCCAAAGCT GGAAGATGAA AGTTACCAGG 660
AGGATGAAGA AGAACACGGT GAAACACTCT GTGGAAGCTG TGGTGGGAAT TACAGTGCTG 720
ATGAATTTTG GATTGGCTGC GACATCTGTG AGAAGTGGTA CCACGGCAAG TGTGTGAAGA 780
TAACACCTGC TAAAGCTGAG AGTATAAAGC AATACAAATG CCCGTCTTGT ACCTTGAAGC 840
GGAGCAGACA GTAGTCCTCT CATGAATCAG AGAAAGAGCC ATAATTCTAT TTCTGGCCAT 900
TAACAGAAGA GTACAGCAAA TATTACACCT GTAATGGACA TGCTATTGTA ATCTTTCTTT 960
ACCTATATAT GCTCAAAAAG AAGTTGAAGT TTCTCTTATT TCCTTCATCC ATCTTCAGAA 1020
TTTAACACAA TCTCAATACA TATTTAGAAA GTCTGTTAAT TTACTCTACT TCCTTTATCA 1080
TGTTAAATTA TTCACAGTTA T 1102
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 99 1e-106 383
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 82 5e-96 347
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 80 6e-93 337
WERAM-Prp-0083 EMJ07006 Prunus persica 82 1e-92 336
WERAM-Thc-0059 EOY07191 Theobroma cacao 79 1e-91 332
WERAM-Met-0092 KEH28874 Medicago truncatula 81 6e-91 330
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 79 4e-89 324
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 76 8e-88 320
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 76 1e-87 320
WERAM-Amt-0010 ERN05231 Amborella trichopoda 75 2e-87 319
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 76 2e-87 318
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 77 5e-85 311
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 78 6e-85 310
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 67 1e-79 293
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 70 2e-77 285
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 70 3e-77 285
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 69 6e-77 284
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 69 7e-77 283
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 69 4e-76 281
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 69 4e-76 281
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 69 4e-76 281
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 67 5e-76 281
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 69 9e-76 280
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 68 1e-75 280
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 67 2e-75 279
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 67 5e-75 277
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 66 2e-74 275
WERAM-Zem-0157 GRMZM5G893976_P01 Zea mays 68 3e-74 275
WERAM-Sei-0039 Si010912m Setaria italica 69 4e-74 275
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 68 1e-73 273
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 65 7e-73 270
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 1e-71 266
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 1e-71 266
WERAM-Aet-0099 EMT23706 Aegilops tauschii 56 1e-66 250
Created Date 25-Jun-2016