WERAM Information

Tag Content
WERAM ID WERAM-Arl-0100
Ensembl Protein ID fgenesh2_kg.6__497__AT5G05610.2
Gene Name AL1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.6__497__AT5G05610.2 fgenesh2_kg.6__497__AT5G05610.2 fgenesh2_kg.6__497__AT5G05610.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-11 44.5 94 236
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                          PHD.txt  26 wfHlkCvklp 35 
                                      ++H +C  l+
  fgenesh2_kg.6__497__AT5G05610.2  94 AVHSDCWLLS 103
                                      69****8665 PP
                          PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                                      t+C  Cg ++++++++++Cd C++w+H+kCvk++  ++++ k++ CpsC +
  fgenesh2_kg.6__497__AT5G05610.2 186 TLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSCCT 236
                                      78********************************555554489******86 PP
Protein Sequence
(Fasta)		MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY GHPNGTWEVN 60
LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW LLSVSSYFGA RLNRNERKRL 120
FSLINDLPTL FEVVTGRKPI KDNKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED 180
DEHGDTLCGS CGGNYTNDEF WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR 240
Q 241
Nucleotide Sequence
(Fasta)		TTGTCTATCT CTACCTCTCT TGTCCGTGCG CATCGGATTT TGGAAACCAT TGATGCAGAC 60
CTCAATCCAT CTCTAACACC ACTGATCTAT CTACTTAGGT CTTCTCTAAC GATACTCGTA 120
ACTTTTTTAC TTTGCTTCTT CCCTTACTTC ATCGATGGCC GCTGAGTCTT CTAACCCTCG 180
CACTGTCGAA GAGATCTTCA AGGATTTTAG CGGTCGTCGC TCCGGTTTTC TTCGAGCTCT 240
CTCCGTAGAT GTTGACAAGT TCTACTCTTT ATGCGATCCG GAAATGGAGA ATCTGTGTTT 300
GTACGGACAC CCTAATGGGA CATGGGAAGT GAATCTTCCA GCTGAGGAAG TGCCTCCGGA 360
GCTACCTGAG CCAGCTCTTG GAATCAATTT CGCAAGAGAT GGTATGCAGC GTAAAGATTG 420
GCTCTCTTTA GTTGCTGTCC ACAGTGATTG TTGGTTACTC TCTGTTTCTT CTTACTTCGG 480
CGCTCGTCTT AATCGCAATG AGAGGAAACG CCTATTTAGT CTGATCAACG ATCTCCCAAC 540
TCTCTTCGAA GTAGTGACGG GTAGGAAGCC CATCAAAGAT AATAAACCAA GCATGGATCT 600
CGGAAGCAAA TCCAGAAACG GCGTTAAGAG ATCAATTGAA GGGCAGACAA AGAGCACGCC 660
GAAGCTAATG GAAGAGAGCT ACGAAGATGA AGACGATGAG CACGGAGACA CACTGTGTGG 720
AAGTTGTGGA GGAAACTACA CAAACGACGA GTTCTGGATA TGTTGTGATG TGTGTGAACG 780
TTGGTACCAT GGGAAGTGTG TGAAGATAAC ACCAGCCAAA GCAGAGAGCA TCAAGCAATA 840
CAAATGCCCT TCTTGCTGTA CTAAGAAAGG AAGACAGTGA GTGAATGAGT GAATTCTCAA 900
AATAAGGGCG TTTTGGATTA GTATTGAGAC ATGGAGAGAG TCATAAAGAC ACCACCAGCT 960
GGTTAGAGAA CTTCGTCAAC TTTTGATCAA ATATGCCATG TGTTTGTATA TATAGCGACT 1020
CTACTTTCAT TAGTTTATGT GTATTCTTAT GTAAGGTTGA TCTTCATAAT CTCTCGTATG 1080
GTGTTTT 1088
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 100 6e-122 433
WERAM-Brr-0044 Bra009121.1-P Brassica rapa 89 2e-106 382
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 85 6e-104 374
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 80 8e-101 363
WERAM-Prp-0085 EMJ19499 Prunus persica 79 4e-99 357
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 79 7e-97 350
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 78 1e-95 346
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 80 1e-95 346
WERAM-Thc-0059 EOY07191 Theobroma cacao 78 4e-94 341
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 77 1e-93 339
WERAM-Mua-0047 GSMUA_Achr2P18960_001 Musa acuminata 73 5e-93 337
WERAM-Amt-0010 ERN05231 Amborella trichopoda 76 2e-91 332
WERAM-Met-0092 KEH28874 Medicago truncatula 78 4e-91 331
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 70 9e-85 310
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 70 9e-85 310
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 70 9e-85 310
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 70 1e-84 310
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 70 1e-84 310
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 69 2e-84 308
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 69 2e-84 308
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 69 2e-84 308
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 69 5e-84 307
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 67 5e-82 301
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 69 3e-79 291
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 65 8e-79 290
WERAM-Zem-0036 GRMZM2G047316_P01 Zea mays 63 1e-78 290
WERAM-Orbr-0082 OB07G15980.1 Oryza brachyantha 68 5e-78 287
WERAM-Sei-0119 Si030965m Setaria italica 63 1e-77 286
WERAM-Php-0063 PP1S262_27V6.1 Physcomitrella patens 64 5e-77 284
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 64 1e-76 283
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 63 5e-75 277
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 60 4e-72 268
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 60 6e-72 267
WERAM-Aet-0106 EMT19247 Aegilops tauschii 59 5e-70 261
Created Date 25-Jun-2016