WERAM Information

Tag Content
WERAM ID WERAM-Brr-0044
Ensembl Protein ID Bra009121.1-P
Gene Name AL1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra009121 Bra009121.1 Bra009121.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.30e-10 40.3 185 235
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C  Cg ++ + +++++Cd C++w+H+kCvk++  ++++ k++ CpsC +
  Bra009121.1-P 185 TLCGSCGGHYLNVEFWICCDVCERWYHGKCVKITPAKAESMKQYKCPSCCT 235
                    78*****9999999********************666665589******86 PP
Protein Sequence
(Fasta)		MAGESSNPGT VEEIFKDFRG RRSAFLQALS VDVDKFYSLC NPEMENLCLY GHPNGTWEVN 60
LPAEEVPPEL PEPALGINFA RDGMQRQDWL SLVAVHSDCW LLSVSSYFGA RLSRNEKNRL 120
FSLINDLPTL FEVVTGRKTI KDKPSMDHES KYQNGLKRSI EGEMKITRKL MEESCEDEED 180
EHGDTLCGSC GGHYLNVEFW ICCDVCERWY HGKCVKITPA KAESMKQYKC PSCCTKKGRQ 240
Nucleotide Sequence
(Fasta)		ATGGCTGGCG AGTCCTCTAA TCCTGGCACC GTCGAAGAGA TCTTCAAGGA TTTTAGAGGT 60
CGTCGCTCTG CTTTTCTTCA AGCTCTCTCC GTAGATGTTG ACAAGTTCTA CTCTTTATGC 120
AATCCTGAAA TGGAGAATCT GTGTTTGTAT GGACACCCGA ATGGGACGTG GGAAGTGAAT 180
CTTCCAGCGG AGGAAGTGCC TCCTGAGCTT CCAGAGCCAG CGCTTGGAAT CAATTTCGCA 240
AGAGATGGCA TGCAGCGTCA AGATTGGCTC TCCTTAGTTG CTGTCCACAG TGATTGTTGG 300
TTGCTCTCTG TTTCCTCCTA CTTTGGCGCT CGGCTTAGTC GCAATGAGAA GAATCGCCTA 360
TTCAGTCTGA TCAACGATCT TCCAACTCTC TTTGAAGTAG TGACCGGTAG GAAGACCATC 420
AAAGATAAAC CAAGCATGGA TCATGAGAGC AAATACCAAA ACGGCTTAAA GAGATCAATT 480
GAAGGAGAGA TGAAGATCAC AAGGAAGTTA ATGGAAGAGA GCTGCGAAGA CGAAGAAGAC 540
GAGCATGGAG ATACACTATG TGGAAGCTGT GGAGGACACT ACCTAAACGT CGAGTTCTGG 600
ATATGTTGTG ATGTATGTGA ACGTTGGTAC CATGGAAAGT GTGTGAAGAT AACACCAGCC 660
AAAGCAGAGA GCATGAAGCA GTACAAATGC CCTTCTTGCT GCACTAAGAA AGGAAGACAG 720
TGA 724
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 89 6e-106 380
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 89 7e-106 380
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 78 6e-89 323
WERAM-Prp-0085 EMJ19499 Prunus persica 73 6e-88 320
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 73 3e-86 315
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 72 1e-84 309
WERAM-Thc-0118 EOY17763 Theobroma cacao 72 3e-84 308
WERAM-Amt-0010 ERN05231 Amborella trichopoda 71 2e-83 305
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 71 3e-83 305
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 73 7e-83 303
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 74 4e-82 301
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 69 2e-81 298
WERAM-Met-0092 KEH28874 Medicago truncatula 70 2e-79 292
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 61 5e-74 274
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 62 9e-73 270
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 60 2e-72 269
WERAM-Zem-0036 GRMZM2G047316_P01 Zea mays 59 3e-72 268
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 63 1e-71 266
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 63 1e-71 266
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 63 1e-71 266
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 63 1e-71 266
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 60 2e-71 266
WERAM-Sei-0134 Si037171m Setaria italica 58 3e-71 265
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 63 3e-71 265
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 63 3e-71 265
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 63 3e-71 265
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 59 8e-71 263
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 63 1e-70 263
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 59 1e-70 263
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 62 5e-70 261
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 57 9e-69 256
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 58 4e-68 254
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 58 5e-68 254
WERAM-Aet-0106 EMT19247 Aegilops tauschii 58 7e-64 240
Created Date 25-Jun-2016