WERAM Information

Tag Content
WERAM ID WERAM-Bro-0102
Ensembl Protein ID Bo5g136750.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo5g136750 Bo5g136750.1 Bo5g136750.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.90e-10 42.3 195 245
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   t+C +Cg ++++++++++Cd C++w+H+kCvk++  ++ + k++ Cp C +
  Bo5g136750.1 195 TLCGICGGNYTQDEFWICCDVCERWYHGKCVKITPAKADSIKQYKCPPCCA 245
                   78****99999999********************555554489******75 PP
Protein Sequence
(Fasta)		MAAVSSNPRT VEEIFKDYTS RRSALLRALT KDVDDFYSQC DPEKENLCLY GHPNESWEVN 60
LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW LLSVSFYFGA RLNRNERKRL 120
FSLINDLPTL FDVVTGRKPI KDNKPSSDSG SKSRNGTKRS VEGQPKSTTP KLMEGSYEDD 180
DEEEGEEEED EHGDTLCGIC GGNYTQDEFW ICCDVCERWY HGKCVKITPA KADSIKQYKC 240
PPCCAKKGRQ
Nucleotide Sequence
(Fasta)		ATGGCAGCCG TTTCCTCTAA TCCTCGCACC GTCGAAGAGA TCTTCAAGGA TTACACCTCT 60
CGTCGCTCCG CTCTTCTCCG TGCTCTAACG AAAGATGTTG ATGATTTCTA CTCTCAATGC 120
GATCCGGAAA AAGAGAATCT TTGTTTGTAC GGACACCCGA ACGAGTCGTG GGAAGTGAAT 180
CTGCCGGCGG AGGAAGTTCC ACCTGAGCTT CCTGAGCCAG CGCTTGGTAT CAATTTCGCT 240
AGAGATGGTA TGCAGAGGAA AGACTGGCTC TCTCTTGTTG CTGTCCACAG TGATTGTTGG 300
TTGCTCTCTG TTTCTTTCTA CTTTGGTGCT CGCCTTAATC GCAACGAGAG GAAGCGGCTA 360
TTCAGTCTGA TCAACGATCT CCCAACTCTC TTCGATGTAG TGACTGGTAG GAAACCCATC 420
AAAGACAACA AACCAAGCTC AGATTCCGGA AGCAAATCCA GAAACGGCAC TAAGAGGTCA 480
GTAGAAGGGC AGCCAAAGAG CACAACACCG AAACTGATGG AAGGGAGCTA TGAGGATGAT 540
GATGAAGAAG AAGGAGAAGA AGAAGAAGAC GAGCATGGAG ACACTCTCTG TGGAATCTGT 600
GGAGGCAATT ACACACAAGA TGAGTTCTGG ATTTGCTGTG ATGTTTGTGA GCGTTGGTAT 660
CACGGAAAAT GCGTGAAGAT CACTCCCGCC AAAGCAGATA GCATCAAGCA GTATAAATGC 720
CCGCCTTGCT GTGCAAAGAA AGGAAGACAG TGA 754
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 96 3e-120 428
WERAM-Arl-0058 fgenesh2_kg.3__ 1160__ AT3G11200.1 Arabidopsis lyrata 92 4e-106 381
WERAM-Art-0068 AT3G11200.1 Arabidopsis thaliana 91 1e-105 379
WERAM-Prp-0085 EMJ19499 Prunus persica 78 8e-95 343
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 76 1e-93 339
WERAM-Thc-0118 EOY17763 Theobroma cacao 77 3e-91 332
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 76 5e-91 331
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 75 6e-91 330
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 73 1e-90 330
WERAM-Amt-0010 ERN05231 Amborella trichopoda 74 5e-90 327
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 76 8e-90 327
WERAM-Met-0150 KEH23172 Medicago truncatula 74 2e-89 325
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 72 1e-88 323
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 66 8e-81 297
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 66 8e-81 297
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 66 8e-81 297
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 66 2e-80 295
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 66 2e-80 295
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 66 2e-80 295
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 66 2e-80 295
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 66 2e-80 295
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 65 1e-79 293
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 64 2e-78 289
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 64 5e-78 288
WERAM-Sei-0134 Si037171m Setaria italica 61 2e-76 283
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 63 3e-76 281
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 63 8e-76 280
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 64 2e-75 279
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 62 4e-75 278
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 62 2e-74 276
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 62 5e-74 274
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 62 6e-74 274
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 62 9e-74 273
WERAM-Aet-0099 EMT23706 Aegilops tauschii 56 8e-69 257
Created Date 25-Jun-2016