WERAM Information

Tag Content
WERAM ID WERAM-Brr-0171
Ensembl Protein ID Bra034860.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra034860 Bra034860.1 Bra034860.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.30e-10 42.3 192 242
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C +Cg ++++++++++Cd C++w+H+kCvk++  ++ + k++ Cp C +
  Bra034860.1-P 192 TLCGICGGNYTQDEFWICCDVCERWYHGKCVKITPAKADSIKQYKCPPCCA 242
                    78****99999999********************555554489******75 PP
Protein Sequence
(Fasta)		MAAVSSNPRT VEEIFKDYTS RRSALLRALT KDVDDFYSQC DPEKENLCLY GHPNESWEVN 60
LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW LLSVSFYFGA RLNRNERKRL 120
FSLINDLPTL FDVVTGRKPI KDNKPSSDSG SKSRNGTKRS IEGQPKSTTP KPMEGSYEDE 180
DEDEEEDEHG DTLCGICGGN YTQDEFWICC DVCERWYHGK CVKITPAKAD SIKQYKCPPC 240
CAKKGRQ 247
Nucleotide Sequence
(Fasta)		ATGGCAGCCG TTTCCTCTAA CCCTCGCACC GTCGAAGAGA TCTTCAAAGA TTACACCTCT 60
CGTCGCTCCG CTCTTCTCCG TGCTCTAACT AAAGATGTTG ATGATTTCTA CTCTCAATGC 120
GATCCGGAAA AGGAGAATCT TTGTTTGTAC GGACACCCGA ACGAGTCGTG GGAAGTGAAT 180
CTACCGGCGG AGGAAGTTCC ACCGGAGCTT CCTGAGCCAG CGCTTGGGAT CAACTTCGCT 240
AGAGATGGTA TGCAGAGGAA AGACTGGCTC TCTCTTGTTG CTGTTCACAG TGATTGTTGG 300
TTGCTCTCTG TTTCTTTCTA CTTTGGTGCT CGCCTTAATC GCAACGAGAG GAAGCGGTTA 360
TTCAGTTTGA TCAACGATCT CCCAACTCTC TTCGATGTAG TGACTGGTAG GAAACCCATC 420
AAAGACAACA AACCAAGCTC GGATTCCGGA AGTAAATCCA GAAACGGCAC TAAGAGATCA 480
ATAGAAGGGC AGCCAAAGAG CACAACACCA AAACCGATGG AAGGGAGCTA CGAGGATGAA 540
GATGAAGACG AAGAAGAAGA CGAGCATGGA GACACTCTCT GTGGAATCTG TGGAGGCAAT 600
TACACACAAG ATGAGTTCTG GATTTGCTGT GATGTTTGTG AGCGTTGGTA TCACGGAAAA 660
TGCGTGAAGA TCACTCCTGC CAAAGCAGAT AGCATCAAGC AGTATAAATG CCCTCCTTGC 720
TGTGCAAAGA AAGGAAGACA GTGA 745
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 96 2e-120 428
WERAM-Arl-0058 fgenesh2_kg.3__ 1160__ AT3G11200.1 Arabidopsis lyrata 92 3e-108 388
WERAM-Art-0068 AT3G11200.1 Arabidopsis thaliana 91 1e-107 386
WERAM-Prp-0085 EMJ19499 Prunus persica 78 2e-95 345
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 77 5e-95 344
WERAM-Thc-0118 EOY17763 Theobroma cacao 78 1e-92 336
WERAM-Sol-0125 Solyc10g076690.1.1 Solanum lycopersicum 74 3e-92 335
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 76 6e-92 334
WERAM-Amt-0010 ERN05231 Amborella trichopoda 75 1e-91 332
WERAM-Met-0150 KEH23172 Medicago truncatula 74 1e-90 329
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 77 2e-90 329
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 77 2e-90 329
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 73 3e-90 328
WERAM-Orm-0069 OMERI07G06560.1 Oryza meridionalis 67 1e-81 300
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 67 1e-81 300
WERAM-Org-0074 ORGLA07G0067800.1 Oryza glaberrima 67 1e-81 300
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 66 3e-81 298
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 66 3e-81 298
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 66 3e-81 298
WERAM-Ori-0080 BGIOSGA024567-PA Oryza indica 66 3e-81 298
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 67 4e-81 298
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 67 1e-80 296
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 65 2e-79 292
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 64 4e-79 291
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 67 9e-79 290
WERAM-Sei-0134 Si037171m Setaria italica 63 1e-78 290
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 65 2e-78 289
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 63 3e-77 285
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 63 1e-76 283
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 62 5e-76 281
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 62 4e-75 278
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 63 4e-75 278
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 62 5e-75 277
WERAM-Aet-0099 EMT23706 Aegilops tauschii 56 6e-70 261
Created Date 25-Jun-2016