WERAM Information

Tag Content
WERAM ID WERAM-Sol-0105
Ensembl Protein ID Solyc09g005360.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc09g005360.2 Solyc09g005360.2.1 Solyc09g005360.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.40e-12 46.7 186 235
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                         t+C  Cg ++  +++++ Cd C++w+H+kCvk++  ++++ k++ CpsC+
  Solyc09g005360.2.1 186 TLCGSCGGNYSADEFWIGCDICEKWYHGKCVKITPAKAESIKQYKCPSCT 235
                         78****999999999*******************555554489******7 PP
Protein Sequence
(Fasta)		MASISSSPRS VEEIFKDYSA RRVGILRALT DDVDEFYNLC DPEKENLCLY GHPNETWEVN 60
LPAEEVPPEL PEPALGINFA RDGMNRRDWL SLVAVHSDCW LLSVAFYFGA RLNRNERKRL 120
FSLINEVPTV FEVVTERKPI KDKPSADSGS RSRGSSIKRS SDGQVKSTPK LEDESYLEDE 180
EEHGETLCGS CGGNYSADEF WIGCDICEKW YHGKCVKITP AKAESIKQYK CPSCTLKRSR 240
Q 241
Nucleotide Sequence
(Fasta)		TGAGGTACAA AAATGGCCTC AATTTCTTCA AGTCCTCGAA GTGTAGAAGA GATCTTCAAA 60
GATTACAGTG CTCGTCGTGT TGGGATACTT CGTGCTTTAA CTGATGATGT GGATGAATTT 120
TATAATCTCT GTGATCCAGA GAAGGAAAAT TTGTGTCTTT ATGGACATCC AAATGAAACT 180
TGGGAAGTCA ACCTTCCTGC GGAGGAAGTT CCACCTGAGC TGCCAGAGCC AGCACTTGGG 240
ATAAATTTTG CTAGGGATGG AATGAATCGT AGAGATTGGC TTTCCCTGGT TGCTGTTCAC 300
AGTGATTGTT GGTTGCTTTC TGTGGCTTTC TATTTTGGAG CTCGTCTTAA TCGAAATGAA 360
AGGAAGCGTC TATTCAGCTT GATCAACGAG GTGCCAACTG TCTTTGAAGT TGTGACTGAA 420
AGAAAACCAA TAAAAGATAA GCCCAGTGCA GACAGTGGAA GCAGATCACG TGGTAGTAGC 480
ATAAAGAGAT CTAGTGATGG TCAGGTGAAA AGCACCCCGA AGCTGGAAGA TGAAAGTTAT 540
CTGGAGGATG AAGAAGAACA CGGTGAAACA CTCTGTGGAA GCTGTGGTGG GAATTACAGT 600
GCTGATGAAT TTTGGATTGG CTGCGACATC TGTGAGAAGT GGTACCATGG CAAGTGTGTG 660
AAGATAACAC CTGCTAAAGC TGAGAGTATA AAGCAATACA AATGCCCGTC TTGTACCTTG 720
AAGCGAAGCA GACAGTAGTC CTCTCATGAA TCAGAGAAAG AGCAGCCATA ATTCTATTTC 780
TGGCCATTAA CAGAATAGTA CAGCAAATAT TACACCTGTA ATGGACATGC TATTGTAATC 840
TTTTCTTTAC CTATATATGC TCAAAAAGAA GATGAAGTTT CTCTTATTTC CTTCATCCAT 900
CTTCAGTATT TAACACAATC CCAATACCTA TATAGAAAGT CTGTTAATTT ACTCTACTTC 960
CTTGATCATG TTAAATTGTT CACAGTTATT TGTCAATGAA ATACATAGTT ATGTTGATAT 1020
ACAGGTACAA CTTCCATATC TGGTTGGTTA CTATGGTATG ATATTTGGAT TTAAGCCAA 1080
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 99 6e-106 380
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 82 1e-94 343
WERAM-Glm-0018 GLYMA03G07750.1 Glycine max 80 8e-92 333
WERAM-Prp-0083 EMJ07006 Prunus persica 83 3e-91 331
WERAM-Thc-0059 EOY07191 Theobroma cacao 79 2e-90 329
WERAM-Met-0092 KEH28874 Medicago truncatula 81 2e-89 326
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 80 1e-87 320
WERAM-Amt-0010 ERN05231 Amborella trichopoda 75 1e-86 316
WERAM-Mua-0013 GSMUA_Achr10P23040_001 Musa acuminata 76 1e-86 316
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 76 2e-86 315
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 76 2e-86 315
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 77 1e-83 306
WERAM-Brr-0166 Bra034169.1-P Brassica rapa 77 1e-83 306
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 68 3e-79 291
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 70 3e-77 285
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 69 6e-77 284
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 69 6e-77 284
WERAM-Lep-0074 LPERR07G06880.1 Leersia perrieri 69 8e-77 283
WERAM-Ors-0066 OS07T0233300-01 Oryza sativa 69 1e-76 283
WERAM-Orr-0075 ORUFI07G08080.1 Oryza rufipogon 69 1e-76 283
WERAM-Orni-0073 ONIVA07G06790.1 Oryza nivara 69 1e-76 283
WERAM-Orgl-0051 OGLUM05G06240.1 Oryza glumaepatula 69 3e-76 281
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 68 3e-76 281
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 67 3e-75 278
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 67 5e-75 277
WERAM-Sob-0020 Sb02g006980.1 Sorghum bicolor 67 9e-75 276
WERAM-Sei-0039 Si010912m Setaria italica 69 2e-74 275
WERAM-Zem-0083 GRMZM2G148810_P01 Zea mays 69 6e-74 274
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 66 1e-73 273
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 66 2e-73 272
WERAM-Brd-0027 BRADI1G53660.1 Brachypodium distachyon 65 8e-73 270
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 63 5e-72 267
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 63 6e-72 267
WERAM-Aet-0099 EMT23706 Aegilops tauschii 56 5e-67 251
Created Date 25-Jun-2016