WERAM Information

Tag Content
WERAM ID WERAM-Sei-0012
Ensembl Protein ID Si002638m
Gene Name SETIT_002638mg
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Si002638m.g Si002638m Si002638m
Si002638m.g Si002640m Si002640m
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.70e-12 48.3 201 251
Organism Setaria italica
Domain Profile
  Me_Reader PHD
    PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C++
  Si002638m 201 TLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTN 251
                78****999999999*******************666664479******97 PP
Protein Sequence
(Fasta)		MDGGGSGAAP NAARTAEEVF RDYRARRAGM IKALTTDVDK FFKLCDPEKE NLCLYGYPNE 60
TWEVTLPAEE VPPEIPEPAL GINFARDGMN EKDWLALVAV HSDSWLLSVA FYFGARFGFD 120
KEARRRLFSM INNMPTIFEV VTGSAKKQTK EKTPNSSSKS NKPSSKVQSR AEARSKAKVP 180
KDEEESGDDD GDEEAEEHDN TLCGTCGTND GKDQFWICCD NCEKWYHGKC VKITPARAEH 240
IKQYKCPDCT NKRARV 256
Nucleotide Sequence
(Fasta)		CCACCGCCAC CACCACCGGC CTTGCTCGTC TCGCGGCGAC CCGCGGCCGC GCTCCCCCGC 60
GCCGGAACCC TAGCGGCCGC CATTGCCCCC GCGCCGCGCG CTCGATGGAC GGAGGGGGCT 120
CTGGGGCGGC GCCGAACGCC GCGCGCACCG CTGAGGAGGT CTTCCGCGAC TACCGCGCCC 180
GCCGCGCCGG CATGATCAAG GCCCTCACCA CCGATGTGGA CAAGTTCTTC AAGCTCTGCG 240
ACCCCGAAAA GGAGAACTTG TGCCTTTATG GGTATCCCAA TGAGACGTGG GAGGTGACCT 300
TGCCAGCTGA GGAAGTGCCC CCAGAGATCC CTGAACCAGC ATTAGGAATC AACTTTGCTA 360
GGGATGGCAT GAACGAGAAG GACTGGCTGG CGCTAGTTGC AGTTCACAGT GATTCCTGGC 420
TACTGTCTGT AGCATTCTAC TTTGGTGCCC GGTTTGGGTT TGACAAAGAA GCTAGGAGGC 480
GACTCTTCAG CATGATAAAC AACATGCCTA CAATATTTGA GGTAGTGACA GGATCGGCCA 540
AGAAACAGAC GAAGGAGAAG ACACCTAACA GTAGCAGCAA GAGCAACAAG CCTAGTTCAA 600
AAGTGCAGTC AAGAGCTGAG GCTCGTTCGA AGGCCAAGGT CCCCAAAGAT GAAGAAGAGA 660
GCGGTGACGA CGATGGGGAC GAGGAGGCGG AAGAGCACGA CAACACCCTG TGCGGGACCT 720
GCGGAACCAA CGACGGCAAG GACCAGTTCT GGATCTGCTG CGATAACTGC GAGAAGTGGT 780
ACCACGGGAA GTGCGTCAAG ATCACGCCCG CCCGGGCCGA GCACATCAAG CAGTACAAGT 840
GCCCGGACTG CACCAACAAG AGGGCCAGGG TGTGAACGAC GACCGAGCAC CCCAGCGGCC 900
TTTTCAGGAG GAAACCATCT CCTGGCGCCG GGATCATCCC CTAGATATGG CGTAGTTTCC 960
TAGCCTGTAA AACCCGCGTT TCTATTTATG GTTACATATC TGTTGGTTAG TTGTTCGACC 1020
TAGCTGTGTG TCTCTAAAAC GTGGCATGTC CCCTGTGTTG AGTGTTGACG TGAGCGTCTC 1080
TCTTCCTAGT ATGTAAACAC TGGAGGTACC TCTCAACTGA CCATTTCTTC ATTATTCGTG 1140
CAGTGCACTT GGTAGTAGTG ACTAGTGACT GTAGTCTTTG TTAACAGTTC CCAGCATGTC 1200
TGCTTGTGCG TAGGTAGGAT TTGAATAGTT CTTGAATTG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0057 Sb03g042180.1 Sorghum bicolor 96 4e-113 404
WERAM-Zem-0054 GRMZM2G080917_P01 Zea mays 93 2e-110 395
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 90 2e-103 372
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 90 2e-103 372
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 90 2e-103 372
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 90 2e-103 372
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 90 2e-103 372
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 90 2e-103 372
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 90 2e-103 372
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 90 2e-103 372
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 90 7e-103 370
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 82 2e-100 362
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 79 4e-98 354
WERAM-Aet-0093 EMT29143 Aegilops tauschii 90 4e-97 351
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 89 1e-96 349
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 79 8e-96 347
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 91 2e-93 338
WERAM-Orbr-0016 OB01G48580.1 Oryza brachyantha 92 4e-93 337
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 75 2e-92 335
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 69 2e-84 309
WERAM-Thc-0077 EOY27191 Theobroma cacao 70 1e-83 306
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 68 5e-83 304
WERAM-Amt-0088 ERM99796 Amborella trichopoda 67 1e-82 303
WERAM-Glm-0220 GLYMA17G05940.1 Glycine max 69 2e-82 302
WERAM-Prp-0082 EMJ27202 Prunus persica 68 1e-81 299
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 63 5e-81 297
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 66 6e-81 297
WERAM-Arl-0088 fgenesh2_kg.5__ 761__ AT3G42790.1 Arabidopsis lyrata 64 2e-80 295
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 66 1e-79 293
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 67 1e-79 293
WERAM-Met-0117 KEH32736 Medicago truncatula 63 2e-79 293
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 64 1e-78 290
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 63 1e-73 273
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 5e-69 258
Created Date 25-Jun-2016