Tag |
Content |
WERAM ID |
WERAM-Zem-0035 |
Ensembl Protein ID |
GRMZM2G046824_P02 |
Gene Name |
LOC100274588 LOC100193052 ZEAMMB73_483858 ZEAMMB73_628415 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
3.70e-31 |
110.5 |
52 |
290 |
|
Organism |
Zea mays |
Domain Profile |
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGas 109 ++hp r++ + +++ + + l+ + + a+a+ell+fhs eyie l + +++ a++ e + + g + + l +G++ GRMZM2G046824_P02 52 DQHPENADRVRNMVSILRRGPIAHFLSWHSGRPAHASELLSFHSSEYIEELVQTNATGAKKKL--------CEGTFLNPGSWGAALLAAGTT 135 6899999999999999999999999999*********************99888777666544........4555566788899999***** PP class-1.txt 110 leaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlail.ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef.. 197 l++ak++ +++ ++a hha+ ++a G+c++n+ la++ l +v +did+h+G+g e fy td v+t+s+h + ++ GRMZM2G046824_P02 136 LSSAKHILDGQGNLAYALvRPPGHHAQPDHADGYCFLNNAGLAVQlALDSGRAKVAVVDIDVHYGNGTAEGFYRTDTVLTMSLHMMHGSWgp 227 ************99987624567********************9715556899*******************************99887733 PP class-1.txt 198 .fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDsl 259 P +G+++++g++kg y +n+Pl +g D ye +++++ + i+ f+P+ + l +G Ds GRMZM2G046824_P02 228 sHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPSIDKFQPQLLFLVVGQDSS 290 36789********************************************************96 PP
|
Protein Sequence (Fasta) | MASESSPPPA GAPPPGLGDK LAVFWDEGML AHDAGRGVFD SGRDPGFLDV LDQHPENADR 60 VRNMVSILRR GPIAHFLSWH SGRPAHASEL LSFHSSEYIE ELVQTNATGA KKKLCEGTFL 120 NPGSWGAALL AAGTTLSSAK HILDGQGNLA YALVRPPGHH AQPDHADGYC FLNNAGLAVQ 180 LALDSGRAKV AVVDIDVHYG NGTAEGFYRT DTVLTMSLHM MHGSWGPSHP QSGSVDEIGE 240 GKGLGYNLNI PLPNGSGDAG YEYAMNELVV PSIDKFQPQL LFLVVGQDSS AEYMWAMIR 299Protein Fasta Sequence
>GRMZM2G046824_P02|Class-I|Zea mays MASESSPPPAGAPPPGLGDKLAVFWDEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAHFLSWHSGRPAHASELLSFHSSEYIEELVQTNATGAKKKLCEGTFLNPGSWGAALLAAGTTLSSAKHILDGQGNLAYALVRPPGHHAQPDHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYGNGTAEGFYRTDTVLTMSLHMMHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPSIDKFQPQLLFLVVGQDSSAEYMWAMIR
|
Nucleotide Sequence (Fasta) | GAAAGAAAGA AAAAAAAAAG GGGTTGCAAT TTTGCTGGGA GCCTGGGACG CTGAGTCAGA 60 CCCCCACCGA TGGCGTCCGA ATCCTCCCCG CCCCCGGCGG GGGCGCCACC GCCTGGTCTG 120 GGAGACAAGC TAGCGGTGTT CTGGGACGAG GGCATGCTGG CCCACGACGC CGGCCGCGGC 180 GTGTTCGACT CGGGCCGCGA CCCCGGATTC CTGGATGTGC TCGACCAACA CCCGGAGAAC 240 GCCGACCGCG TCCGCAACAT GGTCTCCATC CTCCGCCGCG GGCCCATCGC GCACTTCCTC 300 TCCTGGCACT CGGGCCGCCC TGCCCACGCC TCCGAGCTCC TCTCCTTCCA CTCCTCAGAA 360 TACATAGAGG AGCTCGTCCA GACGAACGCC ACCGGAGCCA AGAAGAAGCT CTGTGAGGGC 420 ACGTTCTTGA ACCCGGGCTC CTGGGGTGCG GCGCTTCTAG CGGCCGGGAC CACGCTCTCC 480 TCCGCGAAGC ACATACTAGA CGGGCAGGGG AACCTGGCCT ACGCGTTGGT TCGCCCCCCT 540 GGCCACCACG CGCAGCCCGA CCACGCCGAT GGCTACTGCT TTCTGAACAA TGCCGGACTT 600 GCTGTGCAAC TGGCTCTGGA TTCCGGGCGC GCAAAGGTCG CCGTTGTGGA TATTGATGTG 660 CACTACGGGA ATGGCACCGC GGAGGGCTTC TATCGGACAG ACACCGTGTT GACGATGTCT 720 CTTCACATGA TGCATGGTTC TTGGGGGCCA TCGCATCCGC AGAGTGGCTC CGTCGATGAG 780 ATTGGTGAGG GCAAGGGGCT TGGGTACAAT CTCAATATAC CTTTGCCTAA TGGAAGTGGA 840 GATGCTGGGT ATGAATATGC GATGAACGAG TTGGTTGTTC CATCGATTGA TAAGTTTCAG 900 CCTCAACTGT TGTTTCTTGT GGTCGGCCAA GATTCCAGTG CGGAATATAT GTGGGCGATG 960 ATAAGGTGAT CCATTTCACA AGAGGAAGAG GACAGGAGGT CGGAACAGGA ACTGTCGTCG 1020 ATATTATTCT TGTGAGTTCC ACCCCAAAAC GAAGCAACAC GCCTTGCCCG GTGTGCACCG 1080 ACGAAACCAG CGACAGCAGC ACAGAGACGA ACGGCGTGGT ATCCTCCTGC CTCAGCTGCT 1140 TCCTAGCTGG GGGTGCTCTC TACCGTTTCG AGTACGCAGT CAACCCGGCG CTCTTCCTCG 1200 CCAAAGCGCG AGGAGGGACG TGCACGCTCG CTCCCTCTGA CCCTGACGAC ACGGTGGCTC 1260 GCCGCGCCAG ATACCTGCTG AGCAACGGTT TCAGGTGCTA CAACCTGTTC AAGAGCAACT 1320 GCGAGGACTT CGCGATATAC TGCAAGACTG GCCTTCTTGT CGCTGAGCAG GGCGTTGTCG 1380 GGCAGAGCGG GCAGGCTATC TCCATCATCG GTGGACCTCT CGCCGCGGTG GTCTCGACCC 1440 CATTCCGCTT GGTTACCACG AACATCTATG GGATGGCGGT GATGGCCGTC GGGGTGTACT 1500 GCGCGAGCAG GTATGCAGCT GATATTGGCA ACCGCCGTGA TGTGGTGAAA ATGGAAGTCG 1560 AGGACCTGAC GGCCGGACTG GCCAGCGGCA GGATATGTGC TGTGGAGAAC ATCGCCCAGC 1620 TGGTGGCTCC GGAGGCAGAA GGCCCGGCCG ATGCCACGGC CACGGCCACG CTGGCTGCTT 1680 AACGGACCAT TGTGCCATTG TTGCTGTGAG AGAGATGTGC GTCAGCCAAC ATGTGTGCTA 1740 TTGCTTTGGC TTATTTGTGT TCAGAATCCA CTTAAACTCG GTCGAAGTGA GCTTTCCGTT 1800 CGGCAACGTC TGTACTCTTA CGAATCTCGA TCGTGTATGT CTTTAAGTAT TGTGTTGTGT 1860 TTCAAAGATA AAAAAAGGTG ACCTTTGTGT ATGATTTTTT ATACACGTTG TCTCTTAGCT 1920 GCATTGATAG TCTAAGGTCT CAGAATTGTA CCATGCAATC ATAGT
1966Nucleotide Fasta Sequence
>GRMZM2G046824_P02|Class-I|Zea mays GAAAGAAAGAAAAAAAAAAGGGGTTGCAATTTTGCTGGGAGCCTGGGACGCTGAGTCAGACCCCCACCGATGGCGTCCGAATCCTCCCCGCCCCCGGCGGGGGCGCCACCGCCTGGTCTGGGAGACAAGCTAGCGGTGTTCTGGGACGAGGGCATGCTGGCCCACGACGCCGGCCGCGGCGTGTTCGACTCGGGCCGCGACCCCGGATTCCTGGATGTGCTCGACCAACACCCGGAGAACGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGGCCCATCGCGCACTTCCTCTCCTGGCACTCGGGCCGCCCTGCCCACGCCTCCGAGCTCCTCTCCTTCCACTCCTCAGAATACATAGAGGAGCTCGTCCAGACGAACGCCACCGGAGCCAAGAAGAAGCTCTGTGAGGGCACGTTCTTGAACCCGGGCTCCTGGGGTGCGGCGCTTCTAGCGGCCGGGACCACGCTCTCCTCCGCGAAGCACATACTAGACGGGCAGGGGAACCTGGCCTACGCGTTGGTTCGCCCCCCTGGCCACCACGCGCAGCCCGACCACGCCGATGGCTACTGCTTTCTGAACAATGCCGGACTTGCTGTGCAACTGGCTCTGGATTCCGGGCGCGCAAAGGTCGCCGTTGTGGATATTGATGTGCACTACGGGAATGGCACCGCGGAGGGCTTCTATCGGACAGACACCGTGTTGACGATGTCTCTTCACATGATGCATGGTTCTTGGGGGCCATCGCATCCGCAGAGTGGCTCCGTCGATGAGATTGGTGAGGGCAAGGGGCTTGGGTACAATCTCAATATACCTTTGCCTAATGGAAGTGGAGATGCTGGGTATGAATATGCGATGAACGAGTTGGTTGTTCCATCGATTGATAAGTTTCAGCCTCAACTGTTGTTTCTTGTGGTCGGCCAAGATTCCAGTGCGGAATATATGTGGGCGATGATAAGGTGATCCATTTCACAAGAGGAAGAGGACAGGAGGTCGGAACAGGAACTGTCGTCGATATTATTCTTGTGAGTTCCACCCCAAAACGAAGCAACACGCCTTGCCCGGTGTGCACCGACGAAACCAGCGACAGCAGCACAGAGACGAACGGCGTGGTATCCTCCTGCCTCAGCTGCTTCCTAGCTGGGGGTGCTCTCTACCGTTTCGAGTACGCAGTCAACCCGGCGCTCTTCCTCGCCAAAGCGCGAGGAGGGACGTGCACGCTCGCTCCCTCTGACCCTGACGACACGGTGGCTCGCCGCGCCAGATACCTGCTGAGCAACGGTTTCAGGTGCTACAACCTGTTCAAGAGCAACTGCGAGGACTTCGCGATATACTGCAAGACTGGCCTTCTTGTCGCTGAGCAGGGCGTTGTCGGGCAGAGCGGGCAGGCTATCTCCATCATCGGTGGACCTCTCGCCGCGGTGGTCTCGACCCCATTCCGCTTGGTTACCACGAACATCTATGGGATGGCGGTGATGGCCGTCGGGGTGTACTGCGCGAGCAGGTATGCAGCTGATATTGGCAACCGCCGTGATGTGGTGAAAATGGAAGTCGAGGACCTGACGGCCGGACTGGCCAGCGGCAGGATATGTGCTGTGGAGAACATCGCCCAGCTGGTGGCTCCGGAGGCAGAAGGCCCGGCCGATGCCACGGCCACGGCCACGCTGGCTGCTTAACGGACCATTGTGCCATTGTTGCTGTGAGAGAGATGTGCGTCAGCCAACATGTGTGCTATTGCTTTGGCTTATTTGTGTTCAGAATCCACTTAAACTCGGTCGAAGTGAGCTTTCCGTTCGGCAACGTCTGTACTCTTACGAATCTCGATCGTGTATGTCTTTAAGTATTGTGTTGTGTTTCAAAGATAAAAAAAGGTGACCTTTGTGTATGATTTTTTATACACGTTGTCTCTTAGCTGCATTGATAGTCTAAGGTCTCAGAATTGTACCATGCAATCATAGT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |