| Tag |
Content |
| WERAM ID |
WERAM-Tra-0266 |
| Ensembl Protein ID |
Traes_6BS_9ED0C558F.2 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
7.50e-26 |
93.7 |
2 |
274 |
|
| Organism |
Triticum aestivum |
| Domain Profile |
HDAC Class-I
class-1.txt 20 hpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfd.glfeycqlit 106
hp +++ + ++++ g +k ++v+p +as+e+ll +h+e+y++ lk++ + e+ + + v + l+ + + +
Traes_7AL_CE76BC38A.2 2 HPFDSSKWGRICRFLTKEGHLEKNRVVEPLEASREDLLVVHTEAYLNSLKSSFRVA---AIVEVPPLTLIPNWLVQQrLLYPFRKQVV 86
5666677777777777778888899***********************99865433...2334455555555555551589******* PP
class-1.txt 107 GasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlail.ellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
G+s+ +ak L e+ ain GG+hh +e Gfc Di l i+ + + +rv+ id+d h G+g e+ f + rv + +
Traes_7AL_CE76BC38A.2 87 GGSILSAK-LA-LERGWAINVGGGFHHCSAEEGGGFCAYADITLCIQfAFVRlDISRVMIIDLDAHQGNGHEKDFAHDGRVYILDM-- 170
***98775.43.456789****************************834455589**************************98765.. PP
class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgh....ae 276
y+ + +P + +y v l g + + y + + ++ +f+P+ ++ + G+D l gD+lg+ ++s +g +
Traes_7AL_CE76BC38A.2 171 YNAGIYP-------FDHAAKRYIDQKVELVSGTETDDYLDQLDKALKVAQTRFQPQLIIYNAGTDILDGDPLGNLKISPEGVvirdEK 251
6665566.......445566888899********9999999999************************************97333347 PP
class-1.txt 277 cvkfvksfnlpllvlGGGGYtlr 299
+ +f k+ n+pl+++ GGY +
Traes_7AL_CE76BC38A.2 252 VFRFAKDQNIPLVMMTSGGYMKS 274
99******************764 PP
|
Protein Sequence
(Fasta) | MTVSFHKFGD YFPGTGDVRD IGHSKGKYYS LNVPLDDGID DESYQSLFKP IMAKVMEVFQ 60
PGAVVLQCGA DSLSGDRLGC FNLSIRGHAE CVKYMRSFNV PLLLLGGGGY TIRNVARCWC 120
YETGVALGQE LEDKMPVNEY YEYFGPDYTL HVAPSNMENK NTRYELDNIR TKLLDNLSKL 180
RHAPSVQFQE RPPDTEFPEP DEDEDDQDER HDDPDSDMEM DYHTPLEDSA RRITIQGTRV 240
KRESAGAETK DQQDGSRVTG EHRGPEPMAE DMGPSKQAHQ VDANAMTVDE PGIVKTESGS 300
STKLPDPPAI YQKP 314Protein Fasta Sequence
>Traes_6BS_9ED0C558F.2|Class-I|Triticum aestivum
MTVSFHKFGDYFPGTGDVRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMAKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQELEDKMPVNEYYEYFGPDYTLHVAPSNMENKNTRYELDNIRTKLLDNLSKLRHAPSVQFQERPPDTEFPEPDEDEDDQDERHDDPDSDMEMDYHTPLEDSARRITIQGTRVKRESAGAETKDQQDGSRVTGEHRGPEPMAEDMGPSKQAHQVDANAMTVDEPGIVKTESGSSTKLPDPPAIYQKP |
Nucleotide Sequence
(Fasta) | CCGTCAAGCT CAACCACGGC CTTGACATCG CCATCAACTG GTCGGGGGGC CTGCACCACG 60
CGAAGAAGTG CGAGGCCTCA GGGTTCTGCT ACGTCAACGA CATCGTACTC GCCATACTCG 120
AGCTCCTCAA GCACCACCAG CGAGTTCTCT ATGTCGATAT TGATATCCAC CATGGTGACG 180
GAGTTGAGGA GGCATTCTAC ACGACAGACA GGGTTATGAC AGTCTCATTC CACAAGTTTG 240
GGGATTATTT CCCAGGTACA GGGGATGTCC GTGATATTGG GCATTCAAAA GGAAAGTATT 300
ACTCCCTTAA TGTCCCTCTG GATGATGGGA TTGACGACGA AAGCTACCAG TCCCTGTTTA 360
AGCCTATAAT GGCCAAAGTT ATGGAGGTTT TCCAGCCTGG TGCAGTTGTT CTTCAATGTG 420
GCGCCGATTC GTTATCTGGG GATAGGTTGG GTTGCTTCAA TCTTTCGATC AGAGGTCATG 480
CAGAATGCGT GAAGTACATG AGGTCTTTCA ATGTTCCATT GTTGCTTCTT GGCGGTGGTG 540
GCTATACCAT AAGAAATGTC GCACGATGTT GGTGTTATGA GACAGGAGTT GCACTTGGCC 600
AAGAGCTCGA GGATAAGATG CCTGTCAATG AGTACTATGA ATACTTCGGT CCAGATTACA 660
CTCTTCATGT GGCACCAAGT AACATGGAGA ACAAAAATAC ACGCTACGAA CTGGATAATA 720
TAAGAACCAA ACTTCTTGAC AATCTTTCAA AACTTCGACA TGCCCCTAGC GTTCAGTTTC 780
AAGAGCGACC TCCTGATACT GAGTTCCCTG AGCCGGATGA AGATGAAGAC GATCAGGATG 840
AAAGGCATGA TGACCCTGAT TCTGATATGG AAATGGATTA TCACACACCT TTGGAAGACT 900
CAGCAAGGAG AATCACTATT CAAGGTACAA GAGTTAAGAG AGAATCAGCT GGAGCTGAGA 960
CAAAAGATCA GCAGGATGGT AGCAGAGTAA CAGGTGAACA TAGAGGACCA GAACCTATGG 1020
CAGAAGACAT GGGTCCCTCC AAGCAAGCTC ATCAGGTCGA CGCTAATGCC ATGACCGTGG 1080
ATGAGCCCGG AATTGTCAAG ACCGAATCAG GAAGCTCTAC CAAGTTGCCT GACCCACCAG 1140
CCATCTACCA GAAGCCATGA TTGTAAGCAT TCGGACCGTG CGGCTTCTTG CATGTGTTTT 1200
TGACAGTAAA AAGACGAAGT GACGAGTGGT AGCTCGAGTG TCTGACCCAT GTATACATGT 1260
AGCATGGATT ATTAAG
1277Nucleotide Fasta Sequence
>Traes_6BS_9ED0C558F.2|Class-I|Triticum aestivum
CCGTCAAGCTCAACCACGGCCTTGACATCGCCATCAACTGGTCGGGGGGCCTGCACCACGCGAAGAAGTGCGAGGCCTCAGGGTTCTGCTACGTCAACGACATCGTACTCGCCATACTCGAGCTCCTCAAGCACCACCAGCGAGTTCTCTATGTCGATATTGATATCCACCATGGTGACGGAGTTGAGGAGGCATTCTACACGACAGACAGGGTTATGACAGTCTCATTCCACAAGTTTGGGGATTATTTCCCAGGTACAGGGGATGTCCGTGATATTGGGCATTCAAAAGGAAAGTATTACTCCCTTAATGTCCCTCTGGATGATGGGATTGACGACGAAAGCTACCAGTCCCTGTTTAAGCCTATAATGGCCAAAGTTATGGAGGTTTTCCAGCCTGGTGCAGTTGTTCTTCAATGTGGCGCCGATTCGTTATCTGGGGATAGGTTGGGTTGCTTCAATCTTTCGATCAGAGGTCATGCAGAATGCGTGAAGTACATGAGGTCTTTCAATGTTCCATTGTTGCTTCTTGGCGGTGGTGGCTATACCATAAGAAATGTCGCACGATGTTGGTGTTATGAGACAGGAGTTGCACTTGGCCAAGAGCTCGAGGATAAGATGCCTGTCAATGAGTACTATGAATACTTCGGTCCAGATTACACTCTTCATGTGGCACCAAGTAACATGGAGAACAAAAATACACGCTACGAACTGGATAATATAAGAACCAAACTTCTTGACAATCTTTCAAAACTTCGACATGCCCCTAGCGTTCAGTTTCAAGAGCGACCTCCTGATACTGAGTTCCCTGAGCCGGATGAAGATGAAGACGATCAGGATGAAAGGCATGATGACCCTGATTCTGATATGGAAATGGATTATCACACACCTTTGGAAGACTCAGCAAGGAGAATCACTATTCAAGGTACAAGAGTTAAGAGAGAATCAGCTGGAGCTGAGACAAAAGATCAGCAGGATGGTAGCAGAGTAACAGGTGAACATAGAGGACCAGAACCTATGGCAGAAGACATGGGTCCCTCCAAGCAAGCTCATCAGGTCGACGCTAATGCCATGACCGTGGATGAGCCCGGAATTGTCAAGACCGAATCAGGAAGCTCTACCAAGTTGCCTGACCCACCAGCCATCTACCAGAAGCCATGATTGTAAGCATTCGGACCGTGCGGCTTCTTGCATGTGTTTTTGACAGTAAAAAGACGAAGTGACGAGTGGTAGCTCGAGTGTCTGACCCATGTATACATGTAGCATGGATTATTAAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
