WERAM Information

Tag Content
WERAM ID WERAM-Sob-0054
Ensembl Protein ID Sb03g038950.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb03g038950 Sb03g038950.1 Sb03g038950.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.30e-27 96.3 86 360
Organism Sorghum bicolor
Domain Profile
  HDAC Class-I
    class-1.txt  19 khpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfeycqlit 106
                     hp  +kr+  + + +       ++  s+ lei + + as ++++++hs  yi+ l+k     ++e         ++   P +  +  f+ + l++
  Sb03g038950.1  86 AHPESNKRVPAIVDALeklelsPKHRGSQVLEIQNFNPASLDDVARVHSRSYITGLEKAMRRASDEGL-----IFIEGTGPTYatETTFQESLLSA 176
                    45555555443333331222224455678899999999******************998776665443.....34677777651156666677889 PP
    class-1.txt 107 GasleaakkLnkkeadiainwaGGl.......hhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhky 193
                    Ga ++ ++ +    ++++ n   G+       hha  +   Gfc   +i +a    +++h  krv+ id+d+hhG+g  +afy+   ++ +s h+ 
  Sb03g038950.1 177 GAGITLVDSVVAA-SKLGPNPPLGFalvrppgHHAVPQGPMGFCVFGNIAVAARYAQHQHglKRVMIIDFDVHHGNGTSDAFYVDPDIFFLSTHQL 271
                    9987776665543.334444333322222333*****************99998777654349********************************* PP
    class-1.txt 194 geeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf 284
                    g   +PgtG++++vg+++g   ++n+Pl  g  D  ++  f +vi +  ++f+P+++++  G D+   D+l+  ++++ ++      +k+ 
  Sb03g038950.1 272 GS--YPGTGKINEVGQGDGEGTTLNLPLPGGAGDYAMRYAFDEVIAPSAHRFKPDIILVSAGYDAHVLDPLAGLQFTTGTFYMLAFSIKQL 360
                    **..9*******************************************************************9999987665544444444 PP
Protein Sequence
(Fasta)		MSPLFRHCCA FGSHHPHPLI WRSIFQTSGR EQKQIRSWRA QCSANQDQAS IEKSNAPKNL 60
AIPDDSLLDA RILYCTSPAL GHNKEAHPES NKRVPAIVDA LEKLELSPKH RGSQVLEIQN 120
FNPASLDDVA RVHSRSYITG LEKAMRRASD EGLIFIEGTG PTYATETTFQ ESLLSAGAGI 180
TLVDSVVAAS KLGPNPPLGF ALVRPPGHHA VPQGPMGFCV FGNIAVAARY AQHQHGLKRV 240
MIIDFDVHHG NGTSDAFYVD PDIFFLSTHQ LGSYPGTGKI NEVGQGDGEG TTLNLPLPGG 300
AGDYAMRYAF DEVIAPSAHR FKPDIILVSA GYDAHVLDPL AGLQFTTGTF YMLAFSIKQL 360
AKELCGGRCV FFLEGGYNLQ SLSSSVADTF RAFLDETSLA AQFDDPAILF EEPTRKIKDA 420
IEKAKGIHSL
Nucleotide Sequence
(Fasta)		ATCGAAAGTT CCCCCCGCCC CCGGCATACT CTCGGACTCT CGGTTCTCCC CGTCCTATCC 60
TATCGCGTGC CGCGTGCGCT CCGTGGAGTG TGGACTGCGG TGGCGACTAC TGGGGCGGCC 120
GCCGCCGCCA CCGCCTAACG CCAGTTGCCC AGGTCTCTAT CTTCGGGACC TTTCGCCGGC 180
GACGAGCACC CACCAGGTAG GATGTCGCCT TTGTTCAGAC ACTGCTGTGC CTTTGGAAGT 240
CATCATCCTC ATCCCTTAAT TTGGAGGAGC ATCTTCCAAA CATCGGGAAG AGAACAAAAA 300
CAAATCAGGA GTTGGAGGGC ACAGTGCTCA GCAAATCAGG ATCAAGCTTC TATAGAGAAA 360
AGCAATGCTC CAAAGAATTT AGCAATACCT GATGATTCAC TTCTCGATGC TCGTATTCTC 420
TATTGTACCT CTCCTGCCCT GGGTCATAAC AAAGAAGCCC ATCCAGAATC TAACAAAAGA 480
GTTCCTGCAA TAGTTGATGC TCTTGAGAAA TTGGAGCTTA GTCCCAAGCA TCGTGGTTCA 540
CAGGTTCTTG AAATTCAAAA TTTCAACCCG GCTTCTCTAG ATGATGTTGC ACGAGTTCAT 600
TCAAGATCTT ACATCACTGG ACTCGAAAAG GCTATGCGTA GAGCTTCAGA TGAAGGTCTG 660
ATATTTATTG AAGGGACTGG ACCAACATAC GCTACAGAGA CTACTTTCCA AGAATCACTT 720
CTATCAGCTG GTGCCGGCAT CACATTGGTT GATTCAGTGG TCGCAGCGTC AAAGTTAGGT 780
CCTAATCCGC CCCTTGGCTT TGCTTTAGTA AGGCCACCAG GACATCATGC TGTTCCTCAA 840
GGTCCCATGG GTTTTTGTGT CTTTGGGAAC ATCGCAGTGG CAGCTCGGTA CGCTCAGCAT 900
CAACATGGAC TAAAGCGTGT GATGATAATA GATTTTGATG TTCACCATGG CAATGGGACA 960
TCCGATGCAT TTTATGTTGA TCCAGACATA TTCTTCCTCT CAACTCACCA GCTTGGAAGC 1020
TACCCTGGTA CTGGTAAGAT CAATGAAGTC GGGCAGGGTG ATGGTGAAGG CACGACACTC 1080
AACCTTCCTC TGCCCGGTGG TGCAGGTGAC TACGCAATGA GATATGCATT TGATGAGGTC 1140
ATTGCTCCAT CGGCTCATCG ATTCAAGCCT GATATAATCC TTGTCTCAGC CGGATACGAT 1200
GCACACGTGC TGGACCCTCT GGCTGGCCTG CAGTTCACAA CAGGCACGTT CTACATGTTG 1260
GCATTCAGCA TCAAGCAGCT GGCGAAGGAA CTCTGTGGTG GCCGCTGTGT CTTCTTCCTG 1320
GAAGGCGGGT ACAACCTGCA GTCGCTCTCC AGCTCTGTTG CCGACACGTT CCGTGCATTC 1380
CTTGATGAGA CCAGCCTCGC AGCACAGTTC GATGATCCAG CGATACTTTT TGAAGAGCCA 1440
ACTCGGAAGA TCAAAGACGC AATTGAGAAG GCCAAGGGCA TCCACTCACT CTAG 1495
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 95 0.0 840
WERAM-Sei-0036 Si010171m Setaria italica 89 0.0 795
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 82 0.0 723
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 82 0.0 719
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 82 0.0 719
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 82 0.0 717
WERAM-Tra-0186 Traes_5AS_78CA97493.2 Triticum aestivum 82 0.0 717
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 82 0.0 717
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 82 0.0 716
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 82 0.0 714
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 82 0.0 711
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 81 0.0 709
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 78 0.0 706
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 78 0.0 705
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 78 0.0 704
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 75 0.0 700
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 77 0.0 656
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 70 1e-177 619
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 70 1e-170 596
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 74 2e-165 579
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 68 4e-164 575
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 68 2e-162 569
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 68 8e-162 567
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 73 2e-161 566
WERAM-Met-0183 AET04758 Medicago truncatula 71 1e-160 563
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 68 2e-160 562
WERAM-Prp-0071 EMJ12704 Prunus persica 74 2e-158 556
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 63 7e-156 547
WERAM-Amt-0065 ERN18144 Amborella trichopoda 69 7e-150 527
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 63 6e-130 461
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 78 7e-121 431
WERAM-Thc-0007 EOX92582 Theobroma cacao 78 3e-113 406
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 49 1e-94 344
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 54 1e-53 208
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 38 6e-50 195
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 39 2e-47 187
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 33 1e-46 184
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 35 1e-45 181
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 39 2e-45 180
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 34 2e-45 180
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 36 3e-45 180
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 32 3e-45 180
WERAM-Usm-0012 UM02102P0 Ustilago maydis 34 3e-45 180
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 36 4e-45 179
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 37 4e-45 179
WERAM-Caa-0034 KGT64501 Candida albicans 32 6e-45 179
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 38 1e-44 178
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 34 1e-44 178
WERAM-Coi-0028 EAS30926 Coccidioides immitis 33 1e-44 177
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 34 1e-44 177
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 34 2e-44 177
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 37 2e-44 177
WERAM-Pug-0031 EFP89333 Puccinia graminis 33 2e-44 177
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 35 3e-44 177
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 33 3e-44 176
WERAM-Cag-0018 CAG60803 Candida glabrata 32 3e-44 176
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 33 4e-44 176
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 35 5e-44 176
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 35 6e-44 176
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 33 6e-44 175
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 31 7e-44 175
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 32 8e-44 175
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 34 8e-44 175
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 34 9e-44 175
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 37 1e-43 174
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 34 1e-43 174
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 32 1e-43 174
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 35 1e-43 174
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 36 1e-43 174
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 34 2e-43 174
WERAM-Xim-0154 ENSXMAP00000012744.1 Xiphophorus maculatus 37 2e-43 174
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 32 2e-43 174
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 35 3e-43 173
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 33 4e-43 172
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 33 5e-43 172
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 32 5e-43 172
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 37 5e-43 172
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 37 6e-43 172
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 33 6e-43 172
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 33 7e-43 172
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 36 8e-43 172
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 33 8e-43 172
WERAM-Aet-0088 EMT31322 Aegilops tauschii 41 9e-43 171
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 35 1e-42 171
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 33 1e-42 171
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 34 1e-42 171
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 33 1e-42 171
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 39 1e-42 171
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 33 2e-42 171
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 34 2e-42 171
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 36 2e-42 171
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 35 2e-42 170
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 36 2e-42 170
WERAM-Kop-0012 CAY68916 Komagataella pastoris 32 3e-42 169
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 33 3e-42 169
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 37 5e-42 169
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 32 5e-42 169
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 35 5e-42 169
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 35 6e-42 169
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 35 6e-42 169
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 36 6e-42 169
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 32 7e-42 169
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 35 7e-42 168
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 31 9e-42 168
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 35 9e-42 168
WERAM-Sah-0095 ENSSHAP00000011018.1 Sarcophilus harrisii 35 1e-41 168
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 37 1e-41 168
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 36 1e-41 168
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 35 1e-41 168
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 35 1e-41 167
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 31 2e-41 167
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 36 2e-41 167
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 32 2e-41 167
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 33 2e-41 167
WERAM-Asg-0010 AAS51704 Ashbya gossypii 33 3e-41 167
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 34 3e-41 166
Created Date 25-Jun-2016