| Tag |
Content |
| WERAM ID |
WERAM-Ors-0108 |
| Ensembl Protein ID |
OS12T0182700-01 |
| Gene Name |
Os12g0182700 LOC_Os12g08220 Os12g0182700 OsJ_35446 OSNPB_120182700 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-II |
4.30e-91 |
306.5 |
91 |
408 |
| HDAC |
Class-I |
6.50e-27 |
95.9 |
98 |
371 |
|
| Organism |
Oryza sativa |
| Domain Profile |
HDAC Class-II
class-2.txt 14 qaleenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksika 101
a+ +nke hpE+ +R+ ai+++l++ +l++ +++e++ + a++++++lvHs+++++ le+a++ + e + + ++ +y+++++++
OS12T0182700-01 91 PAMGHNKEAHPETNKRVPAIVDALEKLELTSkhrgsQVLEIQDfQPASLDDIALVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQE 184
567789999********************99555555888888799*********************955555555599*************** PP
class-2.txt 102 arlavGavlelvdkvlkgelkn.....gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvly 190
l++Ga ++lvd+v++++ gfa+vRPPGHHa ++ +mGFC+f n+avaa+++q+++ +k+++i+D+DvHhGnGt ++fy+dp++++
OS12T0182700-01 185 CLLSAGAGITLVDSVVAASKLGpkpplGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDAFYEDPDIFF 278
***************999862245678******************************************************************* PP
class-2.txt 191 lSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatl 284
lS+H + gs +p g+g++++vg+g+geg+++N++++gg+ gd ++ af+ev+ p+a++FkPd++lvsaG+Da++ dpl+gl++t+ ++ +l
OS12T0182700-01 279 LSTH--QLGS-YP--GTGKIHQVGQGNGEGTTLNLPLPGGS-GDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYML 366
****..99**.78..8***********************99.**************************************************** PP
class-2.txt 285 tkqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
+ ++++ +ggr+v++lEGGynl++++++v+ +++a lg
OS12T0182700-01 367 AARIREVaaelCGGRCVFFLEGGYNLESLSSSVADTFRAFLG 408
99988776666*************************999875 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfeycq 103
+ hp +kr+ + + + ++ s+ lei + as ++++ +hs yi+ l+k + ++e ++ P + + f+ c
OS12T0182700-01 98 EAHPETNKRVPAIVDALekleltSKHRGSQVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDEGL-----IFIEGTGPTYatQTTFQECL 186
455555555543333221222226777788999999*********************998776655443.....34777777651167888899 PP
class-1.txt 104 litGasle......aakkLnkkea.diainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtv 188
l++Ga ++ aa+kL k a+ hha + Gfc +i +a + +h krv+ id+d+hhG+g +afy+ ++ +
OS12T0182700-01 187 LSAGAGITlvdsvvAASKLGPKPPlGFALVRP-PGHHAVPEGPMGFCVFGNIAVAARYAQNQHglKRVMIIDFDVHHGNGTCDAFYEDPDIFFL 279
****9877111111444554443313444444.45*****************99998777654349**************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
s h+ g +PgtG++++vg+++g ++n+Pl g D ++ f +vi + ++f+P+++++ G D+ a D+l+ ++++ ++ ++
OS12T0182700-01 280 STHQLGS--YPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIR 371
*******..9*******************************************************************99999876655554444 PP
|
Protein Sequence
(Fasta) | MEQLWVPSLP ILGGRILPML RHYCGFGSHH PLTWRSLQIT GRKQKHNGCW IAYCLPSHNG 60
TSISDTNGVR KDLALPDNLL RDAHILYCTS PAMGHNKEAH PETNKRVPAI VDALEKLELT 120
SKHRGSQVLE IQDFQPASLD DIALVHSRSY ITGLEKAMSR ASDEGLIFIE GTGPTYATQT 180
TFQECLLSAG AGITLVDSVV AASKLGPKPP LGFALVRPPG HHAVPEGPMG FCVFGNIAVA 240
ARYAQNQHGL KRVMIIDFDV HHGNGTCDAF YEDPDIFFLS THQLGSYPGT GKIHQVGQGN 300
GEGTTLNLPL PGGSGDYAMR CAFDEVIAPA AQRFKPDIIL VSAGYDAHAL DPLAGLQFTT 360
GTFYMLAARI REVAAELCGG RCVFFLEGGY NLESLSSSVA DTFRAFLGEP SLAARFDDPA 420
MLYEEPTRKI REAIDKAKHL HSL 443Protein Fasta Sequence
>OS12T0182700-01|Class-I|Oryza sativa
MEQLWVPSLPILGGRILPMLRHYCGFGSHHPLTWRSLQITGRKQKHNGCWIAYCLPSHNGTSISDTNGVRKDLALPDNLLRDAHILYCTSPAMGHNKEAHPETNKRVPAIVDALEKLELTSKHRGSQVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQECLLSAGAGITLVDSVVAASKLGPKPPLGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDAFYEDPDIFFLSTHQLGSYPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIREVAAELCGGRCVFFLEGGYNLESLSSSVADTFRAFLGEPSLAARFDDPAMLYEEPTRKIREAIDKAKHLHSL |
Nucleotide Sequence
(Fasta) | GGTAGAGGAG AGGGGATTCA GTGAGGAAGG GAGAGAGAGA TAGATCCCTG GAGGTTTGCA 60
GGAGGGGATG GAACAGCTGT GGGTGCCATC GCTTCCGATT CTTGGAGGAA GGATATTGCC 120
TATGCTCAGG CACTACTGTG GCTTTGGAAG TCATCATCCC TTAACCTGGA GAAGCTTACA 180
AATTACTGGA AGAAAACAGA AGCATAATGG GTGTTGGATT GCATACTGCT TACCAAGCCA 240
TAATGGAACT TCTATTTCAG ACACAAATGG TGTTCGAAAA GACTTAGCTT TGCCTGACAA 300
TTTGCTTCGT GATGCTCATA TTCTCTATTG TACATCTCCT GCCATGGGTC ATAACAAGGA 360
AGCGCATCCA GAAACTAACA AAAGAGTTCC TGCAATAGTT GATGCTCTCG AAAAACTGGA 420
GCTTACTTCG AAGCATCGTG GTTCACAGGT TCTTGAAATT CAAGATTTCC AACCTGCTTC 480
ACTTGATGAT ATTGCACTAG TTCATTCAAG ATCATACATA ACTGGACTTG AAAAGGCTAT 540
GAGTAGGGCT TCAGATGAAG GTTTGATATT CATTGAAGGA ACTGGACCTA CATATGCTAC 600
CCAGACTACT TTCCAAGAAT GTCTCCTTTC TGCTGGTGCT GGAATTACAT TGGTTGATTC 660
AGTGGTTGCA GCATCAAAGT TGGGCCCGAA GCCACCGCTC GGCTTTGCCT TAGTAAGGCC 720
ACCAGGACAT CATGCTGTTC CTGAAGGTCC CATGGGCTTC TGTGTCTTTG GGAACATTGC 780
AGTGGCAGCT CGGTATGCTC AGAATCAACA TGGTTTAAAG CGGGTCATGA TAATAGATTT 840
TGATGTTCAC CACGGTAACG GCACATGTGA CGCCTTTTAT GAGGATCCGG ACATATTCTT 900
CCTCTCAACT CATCAGCTTG GAAGCTATCC TGGCACCGGT AAGATCCACC AAGTTGGCCA 960
GGGCAACGGC GAGGGCACGA CGCTCAACCT GCCACTACCC GGTGGCTCAG GCGATTACGC 1020
GATGAGGTGC GCGTTTGATG AGGTTATTGC CCCAGCTGCC CAGCGGTTCA AACCTGACAT 1080
CATCCTCGTT TCAGCCGGGT ACGACGCGCA CGCGCTGGAC CCGCTGGCGG GGCTGCAGTT 1140
CACGACGGGG ACGTTCTACA TGCTGGCGGC GAGGATCCGG GAGGTGGCGG CGGAGCTGTG 1200
CGGCGGGCGG TGCGTCTTCT TCCTGGAGGG CGGCTACAAC CTGGAGTCGC TGTCCAGCTC 1260
AGTGGCCGAC ACCTTCCGTG CGTTCCTCGG CGAGCCCAGC CTCGCCGCGC GGTTCGACGA 1320
CCCGGCGATG CTCTACGAGG AGCCCACGCG GAAGATCAGG GAGGCCATCG ACAAGGCCAA 1380
GCACCTCCAC TCGCTCTAAG CGCGGCGCCC AGAAGATTGC AACAGTATCT ATACTTGGCT 1440
GCTGAAACTG CTTGCTGATG CTGGTCAACA ACTCAAGATC ATATTCATGT CTTGTTAGCT 1500
TTTGCACTTT CCAGTGTAGC ATTGTACATC GGAAAAGCAC GGCATAGTCA TTTACATCTT 1560
AGTTGCTGTG AATCAGATAC ATTCGATCGC AAGCTTGTCA ATAGTTCAAT ACCAGTTGTG 1620
TAGATTAATA CCAGTACTAC TGCGATTACT TGCATCTTTC TACTCCAGTT AGTGTCCAGT 1680
GGAACCTGTC GAGCTATCAG CATTTTGTTT TATAATACAA AAGCTGACAT TTTTTTCCCC 1740
1741Nucleotide Fasta Sequence
>OS12T0182700-01|Class-I|Oryza sativa
GGTAGAGGAGAGGGGATTCAGTGAGGAAGGGAGAGAGAGATAGATCCCTGGAGGTTTGCAGGAGGGGATGGAACAGCTGTGGGTGCCATCGCTTCCGATTCTTGGAGGAAGGATATTGCCTATGCTCAGGCACTACTGTGGCTTTGGAAGTCATCATCCCTTAACCTGGAGAAGCTTACAAATTACTGGAAGAAAACAGAAGCATAATGGGTGTTGGATTGCATACTGCTTACCAAGCCATAATGGAACTTCTATTTCAGACACAAATGGTGTTCGAAAAGACTTAGCTTTGCCTGACAATTTGCTTCGTGATGCTCATATTCTCTATTGTACATCTCCTGCCATGGGTCATAACAAGGAAGCGCATCCAGAAACTAACAAAAGAGTTCCTGCAATAGTTGATGCTCTCGAAAAACTGGAGCTTACTTCGAAGCATCGTGGTTCACAGGTTCTTGAAATTCAAGATTTCCAACCTGCTTCACTTGATGATATTGCACTAGTTCATTCAAGATCATACATAACTGGACTTGAAAAGGCTATGAGTAGGGCTTCAGATGAAGGTTTGATATTCATTGAAGGAACTGGACCTACATATGCTACCCAGACTACTTTCCAAGAATGTCTCCTTTCTGCTGGTGCTGGAATTACATTGGTTGATTCAGTGGTTGCAGCATCAAAGTTGGGCCCGAAGCCACCGCTCGGCTTTGCCTTAGTAAGGCCACCAGGACATCATGCTGTTCCTGAAGGTCCCATGGGCTTCTGTGTCTTTGGGAACATTGCAGTGGCAGCTCGGTATGCTCAGAATCAACATGGTTTAAAGCGGGTCATGATAATAGATTTTGATGTTCACCACGGTAACGGCACATGTGACGCCTTTTATGAGGATCCGGACATATTCTTCCTCTCAACTCATCAGCTTGGAAGCTATCCTGGCACCGGTAAGATCCACCAAGTTGGCCAGGGCAACGGCGAGGGCACGACGCTCAACCTGCCACTACCCGGTGGCTCAGGCGATTACGCGATGAGGTGCGCGTTTGATGAGGTTATTGCCCCAGCTGCCCAGCGGTTCAAACCTGACATCATCCTCGTTTCAGCCGGGTACGACGCGCACGCGCTGGACCCGCTGGCGGGGCTGCAGTTCACGACGGGGACGTTCTACATGCTGGCGGCGAGGATCCGGGAGGTGGCGGCGGAGCTGTGCGGCGGGCGGTGCGTCTTCTTCCTGGAGGGCGGCTACAACCTGGAGTCGCTGTCCAGCTCAGTGGCCGACACCTTCCGTGCGTTCCTCGGCGAGCCCAGCCTCGCCGCGCGGTTCGACGACCCGGCGATGCTCTACGAGGAGCCCACGCGGAAGATCAGGGAGGCCATCGACAAGGCCAAGCACCTCCACTCGCTCTAAGCGCGGCGCCCAGAAGATTGCAACAGTATCTATACTTGGCTGCTGAAACTGCTTGCTGATGCTGGTCAACAACTCAAGATCATATTCATGTCTTGTTAGCTTTTGCACTTTCCAGTGTAGCATTGTACATCGGAAAAGCACGGCATAGTCATTTACATCTTAGTTGCTGTGAATCAGATACATTCGATCGCAAGCTTGTCAATAGTTCAATACCAGTTGTGTAGATTAATACCAGTACTACTGCGATTACTTGCATCTTTCTACTCCAGTTAGTGTCCAGTGGAACCTGTCGAGCTATCAGCATTTTGTTTTATAATACAAAAGCTGACATTTTTTTCCCC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
