| Tag |
Content |
| WERAM ID |
WERAM-Orgl-0064 |
| Ensembl Protein ID |
OGLUM06G20570.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.90e-164 |
546.6 |
22 |
332 |
|
| Organism |
Oryza glumaepatula |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94
++v+y+yd +vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y+ fl++v+pe++++ ++ lk+fnvgedcPv
OGLUM06G20570.1 22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPV 115
589******************************************************************************************* PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtv 188
fdgl+++cq+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtv
OGLUM06G20570.1 116 FDGLYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTV 208
**********************997.59****************************************************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
sfhk+g+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecv+f++
OGLUM06G20570.1 209 SFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMR 301
*******.************************************************************************************** PP
class-1.txt 283 sfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
OGLUM06G20570.1 302 SFNVPLLLLGGGGYTIRNVARCWCYETGVAL 332
****************************986 PP
|
Protein Sequence
(Fasta) | MDASAGGGGN SLPTAGADGA KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLAHYGL 60
LDQMQVLKPH PARDRDLCRF HADDYVAFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120
SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180
RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDIGHSK GKYYSLNVPL 240
DDGIDDESYQ SLFKPIMGKV MEVFRPGAVV LQCGADSLSG DRLGCFNLSI RGHAECVRFM 300
RSFNVPLLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PPNEYFEYFG PDYTLHVAPS 360
NMENKNTRQQ LDDIRSRLLD NLSKLRHAPS VQFQERPPEA ELPEQDEDQE DPDERHHADS 420
DVEMDDVKPL DDSGRRSSIQ NVRVKRESAE TDAADQLLWL MCAQRCDGNR VAAEHTKGTE 480
PAADGVGSSK QTVPTDASAM AIDEPGSLKV EPDNSNKLQD QPSVHQKP 528Protein Fasta Sequence
>OGLUM06G20570.1|Class-I|Oryza glumaepatula
MDASAGGGGNSLPTAGADGAKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHVAPSNMENKNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPEAELPEQDEDQEDPDERHHADSDVEMDDVKPLDDSGRRSSIQNVRVKRESAETDAADQLLWLMCAQRCDGNRVAAEHTKGTEPAADGVGSSKQTVPTDASAMAIDEPGSLKVEPDNSNKLQDQPSVHQKP |
Nucleotide Sequence
(Fasta) | ATGGACGCCT CCGCCGGAGG CGGGGGGAAC TCGCTGCCGA CGGCGGGGGC CGACGGGGCC 60
AAGCGGCGGG TGTGCTACTT CTACGACGCG GAGGTGGGGA ACTACTACTA CGGGCAGGGG 120
CACCCGATGA AGCCCCACCG CATCCGGATG ACCCACGCGC TGCTCGCCCA CTACGGCCTC 180
CTCGACCAGA TGCAGGTGCT CAAGCCCCAC CCGGCGCGCG ACCGCGACCT CTGCCGCTTC 240
CACGCCGACG ACTACGTCGC CTTCCTCCGC TCCGTCACGC CGGAGACCCA GCAGGACCAG 300
ATCCGGGCGC TCAAGCGCTT CAACGTCGGC GAGGACTGCC CCGTCTTCGA CGGCCTCTAC 360
AGCTTCTGCC AGACCTACGC CGGGGGATCC GTCGGCGGCG CCGTCAAGCT CAACCACGGC 420
CACGACATCG CCATCAACTG GGCCGGCGGC CTCCACCACG CCAAGAAGTG CGAGGCCTCC 480
GGCTTCTGCT ACGTCAACGA CATCGTCCTC GCCATCCTCG AGCTCCTCAA ATACCACCAG 540
CGTGTTCTCT ATGTGGATAT CGATATCCAC CATGGGGATG GTGTGGAGGA GGCGTTCTAC 600
ACGACGGACA GGGTGATGAC GGTCTCGTTC CACAAGTTTG GGGATTATTT CCCGGGGACC 660
GGGGACATTC GCGATATTGG GCACTCAAAG GGGAAGTATT ACTCTCTGAA TGTCCCGTTG 720
GATGACGGTA TCGACGACGA GAGCTACCAG TCGTTGTTCA AGCCGATCAT GGGGAAGGTG 780
ATGGAGGTTT TTCGCCCTGG CGCGGTGGTG CTCCAGTGCG GTGCGGACTC TCTGTCGGGT 840
GATAGGTTGG GTTGCTTCAA CCTGTCGATC AGGGGCCACG CAGAATGTGT GAGATTCATG 900
AGGTCGTTCA ACGTCCCGCT GTTGCTGCTT GGTGGTGGTG GGTATACCAT AAGAAATGTT 960
GCGCGGTGTT GGTGCTATGA GACAGGAGTT GCACTTGGTC ATGAGCTCAC TGACAAGATG 1020
CCTCCAAATG AGTATTTTGA GTACTTTGGT CCAGATTATA CACTTCATGT TGCACCAAGT 1080
AACATGGAGA ACAAAAACAC ACGCCAGCAA TTGGATGATA TAAGATCAAG ACTTCTTGAT 1140
AATCTTTCAA AACTTCGACA TGCTCCTAGC GTCCAATTTC AAGAGCGACC CCCTGAGGCT 1200
GAGCTACCTG AGCAAGATGA AGACCAAGAG GATCCTGATG AAAGGCACCA TGCTGATTCT 1260
GATGTGGAAA TGGATGATGT CAAACCTTTG GATGACTCAG GAAGGAGGAG CAGTATTCAG 1320
AATGTGAGAG TTAAGAGAGA GTCTGCTGAA ACAGATGCCG CAGATCAGTT GTTATGGTTA 1380
ATGTGTGCTC AAAGGTGTGA TGGTAATAGG GTCGCTGCAG AGCACACCAA GGGCACAGAA 1440
CCTGCGGCTG ATGGAGTTGG TTCCTCGAAA CAAACTGTTC CTACCGATGC AAGTGCGATG 1500
GCCATAGACG AACCAGGCTC CCTGAAAGTC GAGCCAGATA ACTCAAACAA ATTGCAAGAT 1560
CAACCATCGG TGCACCAGAA GCCATAA
1588Nucleotide Fasta Sequence
>OGLUM06G20570.1|Class-I|Oryza glumaepatula
ATGGACGCCTCCGCCGGAGGCGGGGGGAACTCGCTGCCGACGGCGGGGGCCGACGGGGCCAAGCGGCGGGTGTGCTACTTCTACGACGCGGAGGTGGGGAACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCATCCGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGACCAGATGCAGGTGCTCAAGCCCCACCCGGCGCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACGTCGCCTTCCTCCGCTCCGTCACGCCGGAGACCCAGCAGGACCAGATCCGGGCGCTCAAGCGCTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCCGGGGGATCCGTCGGCGGCGCCGTCAAGCTCAACCACGGCCACGACATCGCCATCAACTGGGCCGGCGGCCTCCACCACGCCAAGAAGTGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAATACCACCAGCGTGTTCTCTATGTGGATATCGATATCCACCATGGGGATGGTGTGGAGGAGGCGTTCTACACGACGGACAGGGTGATGACGGTCTCGTTCCACAAGTTTGGGGATTATTTCCCGGGGACCGGGGACATTCGCGATATTGGGCACTCAAAGGGGAAGTATTACTCTCTGAATGTCCCGTTGGATGACGGTATCGACGACGAGAGCTACCAGTCGTTGTTCAAGCCGATCATGGGGAAGGTGATGGAGGTTTTTCGCCCTGGCGCGGTGGTGCTCCAGTGCGGTGCGGACTCTCTGTCGGGTGATAGGTTGGGTTGCTTCAACCTGTCGATCAGGGGCCACGCAGAATGTGTGAGATTCATGAGGTCGTTCAACGTCCCGCTGTTGCTGCTTGGTGGTGGTGGGTATACCATAAGAAATGTTGCGCGGTGTTGGTGCTATGAGACAGGAGTTGCACTTGGTCATGAGCTCACTGACAAGATGCCTCCAAATGAGTATTTTGAGTACTTTGGTCCAGATTATACACTTCATGTTGCACCAAGTAACATGGAGAACAAAAACACACGCCAGCAATTGGATGATATAAGATCAAGACTTCTTGATAATCTTTCAAAACTTCGACATGCTCCTAGCGTCCAATTTCAAGAGCGACCCCCTGAGGCTGAGCTACCTGAGCAAGATGAAGACCAAGAGGATCCTGATGAAAGGCACCATGCTGATTCTGATGTGGAAATGGATGATGTCAAACCTTTGGATGACTCAGGAAGGAGGAGCAGTATTCAGAATGTGAGAGTTAAGAGAGAGTCTGCTGAAACAGATGCCGCAGATCAGTTGTTATGGTTAATGTGTGCTCAAAGGTGTGATGGTAATAGGGTCGCTGCAGAGCACACCAAGGGCACAGAACCTGCGGCTGATGGAGTTGGTTCCTCGAAACAAACTGTTCCTACCGATGCAAGTGCGATGGCCATAGACGAACCAGGCTCCCTGAAAGTCGAGCCAGATAACTCAAACAAATTGCAAGATCAACCATCGGTGCACCAGAAGCCATAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
