Tag |
Content |
WERAM ID |
WERAM-Orgl-0054 |
Ensembl Protein ID |
OGLUM05G19120.1 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
9.80e-37 |
128.4 |
99 |
386 |
|
Organism |
Oryza glumaepatula |
Domain Profile |
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasle 111 ++hp r++ + +++ + + ++ + + a+a+ell+fhs eyie l + ++ a++l e + + g + + l +G++l+ OGLUM05G19120.1 99 DQHPENADRVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIEELVQANAVGAKKLC---------EGTFLNPGSWGAALLAAGTTLS 183 6899999999999999999999999999999******************99998888777766.........445566788899999******* PP class-1.txt 112 aakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlai.lellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef...fPg 200 a+k++ +++a+ia hha+ ++a G+c++n+ la+ l l ++v +did+h+G+g e fy+td v+t+s+h + ++ P OGLUM05G19120.1 184 AMKHILDGHAKIAYALvRPPGHHAQPDRADGYCFLNNAGLAVnLALDSGRRKVAVVDIDVHYGNGTAEGFYHTDSVLTISLHMKHGSWgpsHPQ 277 ************988624567********************94566778999******************************765555233688 PP class-1.txt 201 tGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.....nlpll 289 +G+++++g+++g y +n+Pl +g D ye +++++ + ie f+Pe +v+ +G Ds + D+ g l+++g+ ++ ++++ n ++l OGLUM05G19120.1 278 SGSVDEIGEGRGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFRPELLVFVVGQDSSTFDPNGRQCLTMDGYRKIGQIMRGMadqhsNGQIL 371 9************************************************************************9999988875432235789** PP class-1.txt 290 vlGGGGYtlrnvaRc 304 ++ GGY + a c OGLUM05G19120.1 372 IVQEGGYHISYSAYC 386 ********9988877 PP
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Protein Sequence (Fasta) | MILARCEPAR THGAPEEEDS RSRVKTSTNR PTRSGKGNVT VAASPMESSA SSSAAVAAEG 60 APATGEQLAV FWHEGMVAHD AGRGVFDSGR DPGFLDVLDQ HPENADRVRN MVSILRRGPI 120 ARFISWHSGR PAHAAELLSF HSAEYIEELV QANAVGAKKL CEGTFLNPGS WGAALLAAGT 180 TLSAMKHILD GHAKIAYALV RPPGHHAQPD RADGYCFLNN AGLAVNLALD SGRRKVAVVD 240 IDVHYGNGTA EGFYHTDSVL TISLHMKHGS WGPSHPQSGS VDEIGEGRGL GYNLNIPLPN 300 GSGDAGYEYA MNELVVPAIE KFRPELLVFV VGQDSSTFDP NGRQCLTMDG YRKIGQIMRG 360 MADQHSNGQI LIVQEGGYHI SYSAYCLHAT LEGVLNLQAP LLDDPIAYYP EDEKYTMKVV 420 DIMKKCWKES IPFLKDI 437Protein Fasta Sequence
>OGLUM05G19120.1|Class-I|Oryza glumaepatula MILARCEPARTHGAPEEEDSRSRVKTSTNRPTRSGKGNVTVAASPMESSASSSAAVAAEGAPATGEQLAVFWHEGMVAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIEELVQANAVGAKKLCEGTFLNPGSWGAALLAAGTTLSAMKHILDGHAKIAYALVRPPGHHAQPDRADGYCFLNNAGLAVNLALDSGRRKVAVVDIDVHYGNGTAEGFYHTDSVLTISLHMKHGSWGPSHPQSGSVDEIGEGRGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIEKFRPELLVFVVGQDSSTFDPNGRQCLTMDGYRKIGQIMRGMADQHSNGQILIVQEGGYHISYSAYCLHATLEGVLNLQAPLLDDPIAYYPEDEKYTMKVVDIMKKCWKESIPFLKDI
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Nucleotide Sequence (Fasta) | ATGATTTTAG CCCGCTGCGA GCCTGCACGA ACTCACGGAG CCCCGGAGGA AGAAGACTCT 60 CGGTCAAGAG TCAAGACTTC GACCAATCGA CCAACACGAA GCGGCAAAGG AAACGTCACC 120 GTCGCGGCGT CGCCGATGGA GTCGTCCGCT TCCTCCTCGG CCGCGGTGGC GGCGGAGGGG 180 GCGCCGGCGA CGGGGGAGCA GCTGGCGGTG TTCTGGCACG AGGGCATGGT GGCCCACGAC 240 GCCGGCCGCG GCGTGTTCGA CTCGGGCCGC GACCCGGGCT TCCTCGACGT GCTCGACCAG 300 CACCCGGAGA ACGCCGACCG CGTCCGCAAC ATGGTCTCCA TCCTCCGCCG CGGCCCCATC 360 GCGCGCTTCA TCTCCTGGCA CTCCGGCCGC CCCGCCCACG CCGCCGAGCT CCTCTCCTTC 420 CACTCCGCCG AATACATAGA GGAGCTCGTG CAAGCAAATG CCGTTGGTGC CAAGAAGCTG 480 TGTGAAGGCA CTTTCTTGAA CCCTGGATCC TGGGGTGCTG CGCTTCTGGC GGCTGGAACA 540 ACTTTATCAG CGATGAAGCA CATACTAGAT GGACATGCCA AGATTGCCTA TGCGTTGGTC 600 CGCCCCCCTG GCCATCATGC GCAACCGGAC CGTGCTGATG GTTACTGCTT CCTGAACAAT 660 GCTGGGCTTG CAGTGAATCT GGCTCTGGAT TCAGGACGCA GAAAGGTTGC TGTTGTTGAT 720 ATTGACGTGC ACTATGGAAA TGGCACTGCA GAGGGCTTCT ACCACACAGA CAGCGTGCTG 780 ACGATCTCTC TTCACATGAA GCATGGTTCA TGGGGTCCAT CACATCCCCA GAGTGGCTCG 840 GTGGATGAGA TTGGTGAAGG CAGGGGTCTT GGGTACAATC TCAATATTCC TTTGCCTAAT 900 GGCAGTGGGG ATGCAGGGTA TGAGTATGCG ATGAATGAAT TAGTTGTTCC AGCCATAGAG 960 AAGTTTCGTC CTGAGCTTTT GGTTTTTGTT GTTGGCCAAG ATTCTAGTAC GTTTGATCCC 1020 AATGGAAGAC AGTGCTTAAC CATGGATGGT TATCGAAAAA TTGGGCAAAT AATGAGAGGC 1080 ATGGCTGATC AACACAGCAA TGGTCAAATA TTGATCGTGC AGGAAGGGGG TTATCACATC 1140 AGCTATTCGG CATATTGTCT GCATGCAACA CTAGAAGGTG TTCTGAATCT ACAAGCCCCG 1200 TTGCTTGATG ATCCAATCGC CTATTATCCA GAGGATGAGA AATACACCAT GAAAGTTGTG 1260 GACATCATGA AGAAATGCTG GAAAGAATCT ATTCCATTCT TGAAGGACAT ATAG
1315Nucleotide Fasta Sequence
>OGLUM05G19120.1|Class-I|Oryza glumaepatula ATGATTTTAGCCCGCTGCGAGCCTGCACGAACTCACGGAGCCCCGGAGGAAGAAGACTCTCGGTCAAGAGTCAAGACTTCGACCAATCGACCAACACGAAGCGGCAAAGGAAACGTCACCGTCGCGGCGTCGCCGATGGAGTCGTCCGCTTCCTCCTCGGCCGCGGTGGCGGCGGAGGGGGCGCCGGCGACGGGGGAGCAGCTGGCGGTGTTCTGGCACGAGGGCATGGTGGCCCACGACGCCGGCCGCGGCGTGTTCGACTCGGGCCGCGACCCGGGCTTCCTCGACGTGCTCGACCAGCACCCGGAGAACGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGCCCCATCGCGCGCTTCATCTCCTGGCACTCCGGCCGCCCCGCCCACGCCGCCGAGCTCCTCTCCTTCCACTCCGCCGAATACATAGAGGAGCTCGTGCAAGCAAATGCCGTTGGTGCCAAGAAGCTGTGTGAAGGCACTTTCTTGAACCCTGGATCCTGGGGTGCTGCGCTTCTGGCGGCTGGAACAACTTTATCAGCGATGAAGCACATACTAGATGGACATGCCAAGATTGCCTATGCGTTGGTCCGCCCCCCTGGCCATCATGCGCAACCGGACCGTGCTGATGGTTACTGCTTCCTGAACAATGCTGGGCTTGCAGTGAATCTGGCTCTGGATTCAGGACGCAGAAAGGTTGCTGTTGTTGATATTGACGTGCACTATGGAAATGGCACTGCAGAGGGCTTCTACCACACAGACAGCGTGCTGACGATCTCTCTTCACATGAAGCATGGTTCATGGGGTCCATCACATCCCCAGAGTGGCTCGGTGGATGAGATTGGTGAAGGCAGGGGTCTTGGGTACAATCTCAATATTCCTTTGCCTAATGGCAGTGGGGATGCAGGGTATGAGTATGCGATGAATGAATTAGTTGTTCCAGCCATAGAGAAGTTTCGTCCTGAGCTTTTGGTTTTTGTTGTTGGCCAAGATTCTAGTACGTTTGATCCCAATGGAAGACAGTGCTTAACCATGGATGGTTATCGAAAAATTGGGCAAATAATGAGAGGCATGGCTGATCAACACAGCAATGGTCAAATATTGATCGTGCAGGAAGGGGGTTATCACATCAGCTATTCGGCATATTGTCTGCATGCAACACTAGAAGGTGTTCTGAATCTACAAGCCCCGTTGCTTGATGATCCAATCGCCTATTATCCAGAGGATGAGAAATACACCATGAAAGTTGTGGACATCATGAAGAAATGCTGGAAAGAATCTATTCCATTCTTGAAGGACATATAG
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |