| Tag |
Content |
| WERAM ID |
WERAM-Orbr-0074 |
| Ensembl Protein ID |
OB06G27130.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.70e-164 |
546.9 |
22 |
332 |
|
| Organism |
Oryza brachyantha |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg 97
++v+y+yd +vg+y+ygq+hpmkp+r+++th L+ +ygl +++++kp+ a+ ++l++fh+++y++fl++v+pe++++ ++ lk+fnvgedcPvfdg
OB06G27130.1 22 RRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDG 118
589********************************************************************************************** PP
class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyg 194
l+++cq+++G+s+ +a kLn++ diainwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk+g
OB06G27130.1 119 LYSFCQTYAGGSVGGAVKLNHG-HDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG 214
*******************997.59************************************************************************ PP
class-1.txt 195 eeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvl 291
+ +fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecv+f++sfn+pll+l
OB06G27130.1 215 D-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLL 310
*.*********************************************************************************************** PP
class-1.txt 292 GGGGYtlrnvaRcwtyetavvl 313
GGGGYt+rnvaRcw+yet+v+l
OB06G27130.1 311 GGGGYTIRNVARCWCYETGVAL 332
*******************986 PP
|
Protein Sequence
(Fasta) | MDASAGGGGN SLPTTGADGA KRRVCYFYDA EVGNYYYGQG HPMKPHRIRM THALLAHYGL 60
LDQMQVLKPH PARDRDLCRF HADDYVSFLR SVTPETQQDQ IRALKRFNVG EDCPVFDGLY 120
SFCQTYAGGS VGGAVKLNHG HDIAINWAGG LHHAKKCEAS GFCYVNDIVL AILELLKYHQ 180
RVLYVDIDIH HGDGVEEAFY TTDRVMTVSF HKFGDYFPGT GDIRDIGHSK GKYYSLNVPL 240
DDGIDDESYQ SLFKPIMGKV MEVFRPGAVV LQCGADSLSG DRLGCFNLSI RGHAECVRFM 300
RSFNVPLLLL GGGGYTIRNV ARCWCYETGV ALGHELTDKM PPNDYYEYFG PDYTLHVAPS 360
NMENKNTRQQ LDDIRSRLLD NLSKLRHAPS IQFQERPPEA ELPEQDEDQD DPDERHHADS 420
DVEMDDVKPL DDSGRRTSIQ NVRVKRESAE TDAIDQDGNR VTAEHTKGTE PVADGVGSSK 480
QTVPNDASAM AIDEPGTLKV EGDNSNKLQD QPSVHQKP 518Protein Fasta Sequence
>OB06G27130.1|Class-I|Oryza brachyantha
MDASAGGGGNSLPTTGADGAKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCRFHADDYVSFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNDYYEYFGPDYTLHVAPSNMENKNTRQQLDDIRSRLLDNLSKLRHAPSIQFQERPPEAELPEQDEDQDDPDERHHADSDVEMDDVKPLDDSGRRTSIQNVRVKRESAETDAIDQDGNRVTAEHTKGTEPVADGVGSSKQTVPNDASAMAIDEPGTLKVEGDNSNKLQDQPSVHQKP |
Nucleotide Sequence
(Fasta) | CCGGAGAGCC GAACCACAAA CCCAAGCCTC CCGGAGGAGA AGGCGGCGGC GCCGCGGCGA 60
TGGACGCCTC GGCCGGCGGC GGGGGGAACT CCCTGCCGAC GACCGGCGCG GACGGGGCGA 120
AGCGCCGGGT GTGCTACTTC TACGACGCGG AGGTGGGGAA CTACTACTAC GGGCAGGGCC 180
ACCCGATGAA GCCCCACCGC ATCCGGATGA CCCACGCGCT GCTCGCCCAC TACGGCCTCC 240
TCGACCAGAT GCAGGTGCTC AAGCCCCACC CGGCCCGCGA CCGCGACCTC TGCCGCTTCC 300
ACGCCGACGA CTACGTCTCC TTCCTCCGCT CCGTCACCCC GGAGACCCAG CAGGACCAGA 360
TCCGCGCGCT CAAGCGTTTC AACGTCGGCG AGGACTGCCC CGTCTTCGAC GGCCTCTACA 420
GCTTCTGCCA GACCTACGCC GGCGGCTCCG TCGGGGGCGC CGTCAAGCTC AACCACGGCC 480
ACGACATCGC TATCAACTGG GCCGGCGGTC TCCACCACGC GAAGAAGTGC GAGGCCTCCG 540
GCTTCTGCTA CGTCAACGAC ATCGTCCTCG CCATCCTTGA GCTCCTCAAG TACCACCAGC 600
GTGTTCTTTA TGTGGATATC GATATCCACC ATGGGGATGG TGTGGAAGAG GCATTTTACA 660
CGACGGACAG GGTGATGACG GTCTCATTCC ATAAGTTTGG GGATTATTTC CCGGGGACGG 720
GGGACATTCG CGATATTGGG CACTCCAAGG GGAAGTATTA CTCCCTAAAT GTCCCATTGG 780
ATGATGGTAT TGATGATGAG AGCTACCAGT CCTTGTTCAA GCCCATCATG GGGAAGGTGA 840
TGGAGGTTTT TCGCCCTGGC GCGGTTGTTC TCCAGTGTGG CGCAGACTCT TTGTCTGGTG 900
ACAGGTTGGG TTGCTTCAAC CTATCAATCA GGGGGCATGC GGAATGTGTG AGATTCATGA 960
GGTCCTTCAA CGTCCCGCTG TTACTGCTTG GTGGTGGTGG GTATACCATA AGAAATGTTG 1020
CACGATGTTG GTGCTATGAG ACAGGAGTTG CACTTGGTCA TGAGCTCACT GACAAGATGC 1080
CTCCAAATGA TTATTATGAG TATTTTGGTC CAGATTATAC ACTTCATGTT GCACCAAGTA 1140
ACATGGAGAA CAAAAACACA CGCCAGCAAT TGGATGATAT AAGATCAAGA CTCCTTGATA 1200
ATCTTTCAAA ACTTCGACAT GCTCCTAGCA TCCAATTTCA AGAGCGACCC CCTGAGGCTG 1260
AGCTACCTGA GCAAGATGAA GACCAAGATG ATCCTGATGA AAGACACCAT GCTGATTCTG 1320
ATGTGGAAAT GGATGATGTC AAACCTTTGG ATGACTCAGG AAGGAGGACC AGTATTCAGA 1380
ATGTGAGAGT TAAGAGAGAG TCTGCTGAAA CAGATGCCAT AGATCAGGAT GGTAATAGAG 1440
TCACTGCAGA GCACACGAAG GGCACAGAAC CTGTGGCTGA TGGAGTTGGT TCCTCGAAAC 1500
AAACTGTTCC TAACGATGCA AGTGCGATGG CCATAGATGA ACCAGGCACC CTAAAAGTTG 1560
AGGGAGATAA CTCAAACAAA TTGCAGGATC AACCTTCGGT GCACCAGAAG CCATAGAACT 1620
CTACCTTACA CTTAGTAACT GATGCCATCT GTCGGCCATT GATTCTATTG GAGAAACCCC 1680
AACTCTGAAG CAGAGAGTTC AGAAAAATAC CAAAAGTTAT ATACCAAAAT TCGAATGGTA 1740
TGTACACCTT TCGAACTGTT GGTGTTTTGT GCGCTATATT TATGACAGGC TGACTGTTAT 1800
GGTATTTCTG ATTAGCTTTA GTTTAACCCT GGCTGTTGTC GAGAAATTGT TATAGTCGCA 1860
ATATATTCTG GATCCACCGA ACAATGTGTG ACGGCTGCCA TACCATTGGT TGTGACTTCA 1920
GTAATGTATG TATATGCATG TATAGGGATA GGCAGCAGAC ATTGCTTTGG TGGGAGCTAT 1980
AGCTTTGTCT CTCTTCACAT CCCTAATACA TGGGGCGCTC TCGTAGTTGT TTAGATATTG 2040
CTGAAGTCTT CAAATGCTCA TTTAGAGAGA TTCTAGCGTA T
2082Nucleotide Fasta Sequence
>OB06G27130.1|Class-I|Oryza brachyantha
CCGGAGAGCCGAACCACAAACCCAAGCCTCCCGGAGGAGAAGGCGGCGGCGCCGCGGCGATGGACGCCTCGGCCGGCGGCGGGGGGAACTCCCTGCCGACGACCGGCGCGGACGGGGCGAAGCGCCGGGTGTGCTACTTCTACGACGCGGAGGTGGGGAACTACTACTACGGGCAGGGCCACCCGATGAAGCCCCACCGCATCCGGATGACCCACGCGCTGCTCGCCCACTACGGCCTCCTCGACCAGATGCAGGTGCTCAAGCCCCACCCGGCCCGCGACCGCGACCTCTGCCGCTTCCACGCCGACGACTACGTCTCCTTCCTCCGCTCCGTCACCCCGGAGACCCAGCAGGACCAGATCCGCGCGCTCAAGCGTTTCAACGTCGGCGAGGACTGCCCCGTCTTCGACGGCCTCTACAGCTTCTGCCAGACCTACGCCGGCGGCTCCGTCGGGGGCGCCGTCAAGCTCAACCACGGCCACGACATCGCTATCAACTGGGCCGGCGGTCTCCACCACGCGAAGAAGTGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTTGAGCTCCTCAAGTACCACCAGCGTGTTCTTTATGTGGATATCGATATCCACCATGGGGATGGTGTGGAAGAGGCATTTTACACGACGGACAGGGTGATGACGGTCTCATTCCATAAGTTTGGGGATTATTTCCCGGGGACGGGGGACATTCGCGATATTGGGCACTCCAAGGGGAAGTATTACTCCCTAAATGTCCCATTGGATGATGGTATTGATGATGAGAGCTACCAGTCCTTGTTCAAGCCCATCATGGGGAAGGTGATGGAGGTTTTTCGCCCTGGCGCGGTTGTTCTCCAGTGTGGCGCAGACTCTTTGTCTGGTGACAGGTTGGGTTGCTTCAACCTATCAATCAGGGGGCATGCGGAATGTGTGAGATTCATGAGGTCCTTCAACGTCCCGCTGTTACTGCTTGGTGGTGGTGGGTATACCATAAGAAATGTTGCACGATGTTGGTGCTATGAGACAGGAGTTGCACTTGGTCATGAGCTCACTGACAAGATGCCTCCAAATGATTATTATGAGTATTTTGGTCCAGATTATACACTTCATGTTGCACCAAGTAACATGGAGAACAAAAACACACGCCAGCAATTGGATGATATAAGATCAAGACTCCTTGATAATCTTTCAAAACTTCGACATGCTCCTAGCATCCAATTTCAAGAGCGACCCCCTGAGGCTGAGCTACCTGAGCAAGATGAAGACCAAGATGATCCTGATGAAAGACACCATGCTGATTCTGATGTGGAAATGGATGATGTCAAACCTTTGGATGACTCAGGAAGGAGGACCAGTATTCAGAATGTGAGAGTTAAGAGAGAGTCTGCTGAAACAGATGCCATAGATCAGGATGGTAATAGAGTCACTGCAGAGCACACGAAGGGCACAGAACCTGTGGCTGATGGAGTTGGTTCCTCGAAACAAACTGTTCCTAACGATGCAAGTGCGATGGCCATAGATGAACCAGGCACCCTAAAAGTTGAGGGAGATAACTCAAACAAATTGCAGGATCAACCTTCGGTGCACCAGAAGCCATAGAACTCTACCTTACACTTAGTAACTGATGCCATCTGTCGGCCATTGATTCTATTGGAGAAACCCCAACTCTGAAGCAGAGAGTTCAGAAAAATACCAAAAGTTATATACCAAAATTCGAATGGTATGTACACCTTTCGAACTGTTGGTGTTTTGTGCGCTATATTTATGACAGGCTGACTGTTATGGTATTTCTGATTAGCTTTAGTTTAACCCTGGCTGTTGTCGAGAAATTGTTATAGTCGCAATATATTCTGGATCCACCGAACAATGTGTGACGGCTGCCATACCATTGGTTGTGACTTCAGTAATGTATGTATATGCATGTATAGGGATAGGCAGCAGACATTGCTTTGGTGGGAGCTATAGCTTTGTCTCTCTTCACATCCCTAATACATGGGGCGCTCTCGTAGTTGTTTAGATATTGCTGAAGTCTTCAAATGCTCATTTAGAGAGATTCTAGCGTAT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
