WERAM Information

Tag Content
WERAM ID WERAM-Zem-0142
Ensembl Protein ID GRMZM2G456473_P01
Gene Name Zm.158881
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G456473 GRMZM2G456473_T01 GRMZM2G456473_P01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.00e-26 94.9 84 380
Organism Zea mays
Domain Profile
  HDAC Class-I
        class-1.txt  17 gqkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfe 100
                        ++ hp  +kr+ ++ + +       ++  s+ lei + + as ++++++hs  yi+ l+k     ++e         ++   P +  +  f 
  GRMZM2G456473_P01  84 KEAHPESNKRVPVIVDTLeklelsPKHRGSQVLEIQNFNPASLDDVARVHSRSYITGLEKAMGRASDEGL-----ILIEGTGPTYatETTFR 170
                        4566666666665555442222223445567899999999999999*****99*9999998877666544.....45667777651145566 PP
        class-1.txt 101 ycqlitGasleaakkLnkkeadiainwaGGl.......hhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttd 183
                         + l++Ga ++ ++ +    ++++ n   G+       hha  +   Gfc   +i +a    +++h  krv+ id+d+hhG+g  + fy   
  GRMZM2G456473_P01 171 ESLLSAGAGITLVDSVVAA-SKLGPNPPLGFalirppgHHAVPQGPMGFCVFGNIAVAARYAQHQHglKRVMIIDFDVHHGNGTSDSFYDDP 261
                        6678888877766665543.334444333322222333*****************99998777654349*********************** PP
        class-1.txt 184 rvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgha 275
                         ++ +s h+ g   +PgtG++++vg+++g   ++n+Pl  g  D  ++  f +vi +  ++f+P+++++  G D+ a D+l+  ++++ ++ 
  GRMZM2G456473_P01 262 DIFFLSTHQLGS--YPGTGKINEVGQGDGEGTTLNLPLPGGAGDYAMRCAFDEVIAPSAHRFKPDIILVSAGYDAHALDPLAGLQFTTGTFY 351
                        ************..9********************************************************************999987765 PP
        class-1.txt 276 ecvkfvksfnlpl.....lvlGGGGYtlr 299
                           + +k+   +l     +    GGY+l+
  GRMZM2G456473_P01 352 MLASSIKQVTKELcggrcVFFLEGGYNLQ 380
                        55555544433321111133444667766 PP
Protein Sequence
(Fasta)		MLPLFRHCCA FGSHHPHPLI WRNIFQTSRR EQKQIRSWDA QCSANQDQAS IEKCNAPKNL 60
PIPDNSLLDA RILYCTSPAL GHNKEAHPES NKRVPVIVDT LEKLELSPKH RGSQVLEIQN 120
FNPASLDDVA RVHSRSYITG LEKAMGRASD EGLILIEGTG PTYATETTFR ESLLSAGAGI 180
TLVDSVVAAS KLGPNPPLGF ALIRPPGHHA VPQGPMGFCV FGNIAVAARY AQHQHGLKRV 240
MIIDFDVHHG NGTSDSFYDD PDIFFLSTHQ LGSYPGTGKI NEVGQGDGEG TTLNLPLPGG 300
AGDYAMRCAF DEVIAPSAHR FKPDIILVSA GYDAHALDPL AGLQFTTGTF YMLASSIKQV 360
TKELCGGRCV FFLEGGYNLQ SLSSSVADTF RAFLDEPSLA AQFDDPAILF EEPTRKIKEA 420
IEKAKSIHSL
Nucleotide Sequence
(Fasta)		ATCGCGTGCG CTCTGTGGAC CGTGGTGGCG ACTACTGGGT GGCCGCCGCC ACCCCCGCTC 60
GGCCGCCCTA CGCCAGGTGC TCACCGTCTT CGGGACCTTC GCCGGCAACG AACACTCACC 120
AGGGAGGATG TTGCCCTTGT TTAGACACTG CTGTGCCTTT GGAAGTCATC ATCCTCATCC 180
CTTAATTTGG AGGAACATCT TCCAAACATC GCGAAGAGAA CAAAAACAAA TCAGGAGTTG 240
GGATGCACAG TGCTCAGCAA ATCAGGATCA AGCTTCTATA GAGAAATGCA ATGCTCCAAA 300
GAATTTACCA ATACCTGATA ATTCACTTCT CGATGCTCGT ATTCTCTATT GTACCTCTCC 360
TGCCCTGGGT CATAACAAAG AAGCACACCC AGAATCGAAC AAAAGAGTTC CTGTGATAGT 420
TGATACTCTT GAGAAATTGG AGCTTAGTCC CAAGCATCGT GGTTCACAGG TTCTTGAAAT 480
TCAAAATTTC AACCCTGCTT CTCTAGATGA TGTTGCACGA GTTCATTCAA GATCTTACAT 540
CACTGGACTA GAAAAGGCTA TGGGCAGAGC TTCAGATGAA GGTCTGATAT TGATTGAAGG 600
GACAGGACCA ACATACGCTA CAGAAACTAC TTTCCGAGAA TCACTTCTAT CAGCTGGTGC 660
CGGAATCACA CTGGTTGATT CAGTGGTCGC AGCGTCAAAG TTAGGTCCTA ATCCGCCCCT 720
TGGCTTTGCA TTGATAAGGC CACCAGGACA TCATGCTGTT CCTCAAGGTC CCATGGGTTT 780
TTGTGTCTTT GGGAACATTG CAGTGGCAGC TCGGTACGCT CAGCATCAAC ATGGACTAAA 840
GCGTGTGATG ATAATAGATT TTGATGTTCA CCATGGCAAT GGGACGTCAG ATTCATTTTA 900
TGATGATCCA GATATCTTCT TCTTGTCAAC TCACCAGCTT GGAAGCTACC CTGGTACTGG 960
TAAGATCAAT GAAGTCGGAC AGGGTGATGG TGAAGGCACG ACACTCAACC TTCCTCTGCC 1020
CGGTGGCGCA GGTGACTACG CAATGAGATG TGCATTTGAT GAGGTCATTG CTCCATCGGC 1080
CCATCGATTC AAGCCTGATA TAATCCTTGT ATCAGCTGGA TACGACGCAC ACGCGCTGGA 1140
CCCTCTGGCT GGCCTTCAGT TCACAACAGG CACGTTCTAC ATGCTGGCAT CCAGCATCAA 1200
GCAGGTGACC AAGGAACTCT GTGGTGGCCG CTGTGTCTTC TTCCTGGAAG GCGGGTACAA 1260
CCTGCAGTCG CTCTCCAGCT CCGTTGCCGA CACGTTCCGT GCATTCCTTG ATGAGCCCAG 1320
CCTCGCAGCA CAGTTTGATG ATCCAGCGAT ACTTTTCGAA GAGCCGACTC GGAAGATCAA 1380
GGAAGCAATC GAGAAGGCCA AGAGCATCCA CTCACTCTAG GCTGTCAGCT AATTTTCCCC 1440
CCAATCCCCA GAAATCCCGG AGGGGTAGCC CTAAATTGGG AAAAGGTGCT GTCAGCAGTG 1500
TGCACTGCAG AACTGCAAGA TCTTGTGGCA ATTGGCATTT TGCAGGTAGG TAGTGCATAG 1560
TTTGAACTTG GAAGGCATGG TCATTTTAAT TTAGCCAATT CTCACCAGAA AATGGAATTA 1620
CCGTTCTCTC AATACTAGCT GTATATATTG ACCAAAAGTT ATGTGCTACA TTATTAATTT 1680
TAAAAC 1687
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 95 0.0 820
WERAM-Sei-0036 Si010171m Setaria italica 89 0.0 779
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 81 0.0 709
WERAM-Tra-0217 Traes_5BS_F36388166.1 Triticum aestivum 81 0.0 705
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 81 0.0 701
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 81 0.0 700
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 81 0.0 699
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 81 0.0 698
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 81 0.0 697
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 81 0.0 697
WERAM-Lep-0114 LPERR12G04530.1 Leersia perrieri 81 0.0 696
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 81 0.0 694
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 77 0.0 687
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 77 0.0 686
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 77 0.0 685
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 74 0.0 681
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 78 0.0 649
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 69 3e-174 608
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 75 6e-165 577
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 66 2e-160 562
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 69 2e-155 545
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 71 4e-155 545
WERAM-Met-0183 AET04758 Medicago truncatula 70 5e-155 544
WERAM-Prp-0071 EMJ12704 Prunus persica 74 1e-154 543
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 70 5e-154 541
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 71 3e-153 538
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 70 2e-152 536
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 62 5e-151 531
WERAM-Amt-0065 ERN18144 Amborella trichopoda 68 9e-144 507
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 62 2e-126 449
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 77 1e-115 413
WERAM-Thc-0007 EOX92582 Theobroma cacao 78 3e-110 395
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 52 2e-91 333
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 54 1e-54 211
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 37 2e-49 194
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 39 2e-47 187
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 36 7e-47 185
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 38 1e-46 184
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 38 2e-46 184
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 39 2e-46 184
WERAM-Coi-0028 EAS30926 Coccidioides immitis 33 2e-46 184
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 35 5e-46 182
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 37 5e-46 182
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 38 7e-46 182
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 34 3e-45 180
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 37 3e-45 180
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 34 3e-45 180
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 35 3e-45 179
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 36 3e-45 179
WERAM-Caa-0034 KGT64501 Candida albicans 31 4e-45 179
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 36 5e-45 179
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 34 6e-45 179
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 35 1e-44 177
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 36 3e-44 176
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 37 3e-44 176
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 35 3e-44 176
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 35 4e-44 176
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 37 5e-44 176
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 36 5e-44 176
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 36 5e-44 176
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 36 6e-44 175
WERAM-Usm-0012 UM02102P0 Ustilago maydis 34 8e-44 175
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 37 9e-44 175
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 35 1e-43 175
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 36 1e-43 174
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 33 1e-43 174
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 32 1e-43 174
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 34 2e-43 174
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 36 2e-43 174
WERAM-Cag-0018 CAG60803 Candida glabrata 32 2e-43 174
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 36 2e-43 173
WERAM-Xim-0225 ENSXMAP00000018758.1 Xiphophorus maculatus 35 2e-43 173
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 34 3e-43 173
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 30 3e-43 173
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 33 5e-43 172
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 37 5e-43 172
WERAM-Orn-0108 ENSONIP00000011544.1 Oreochromis niloticus 33 6e-43 172
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 38 7e-43 172
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 36 7e-43 172
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 33 8e-43 172
WERAM-Pof-0015 ENSPFOP00000001511.2 Poecilia formosa 34 1e-42 171
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 35 1e-42 171
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 34 1e-42 171
WERAM-Pes-0141 ENSPSIP00000016742.1 Pelodiscus sinensis 36 2e-42 171
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 35 2e-42 171
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 32 2e-42 170
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 35 3e-42 170
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 35 3e-42 170
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 33 5e-42 169
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 32 5e-42 169
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 34 5e-42 169
WERAM-Aet-0088 EMT31322 Aegilops tauschii 41 5e-42 169
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 35 6e-42 169
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 34 6e-42 169
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 33 6e-42 169
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 34 6e-42 169
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 35 7e-42 169
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 33 7e-42 168
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 35 8e-42 168
WERAM-Pug-0031 EFP89333 Puccinia graminis 32 8e-42 168
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 32 8e-42 168
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 34 8e-42 168
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 35 9e-42 168
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 34 9e-42 168
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 34 1e-41 168
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 34 1e-41 168
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 34 1e-41 168
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 34 1e-41 167
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 33 1e-41 167
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 36 2e-41 167
WERAM-Orla-0178 ENSORLP00000020522.1 Oryzias latipes 41 2e-41 167
WERAM-Trv-0041 EHK18675 Trichoderma virens 32 7e-41 165
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 35 8e-41 165
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 33 1e-40 164
WERAM-Mae-0029 ENSMEUP00000002095.1 Macropus eugenii 35 1e-40 164
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 36 1e-40 164
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 31 1e-40 164
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 36 1e-40 164
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 37 2e-40 164
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 36 2e-40 164
WERAM-Kop-0012 CAY68916 Komagataella pastoris 30 2e-40 164
Created Date 25-Jun-2016