| Tag |
Content |
| WERAM ID |
WERAM-Glm-0156 |
| Ensembl Protein ID |
GLYMA13G06010.3 |
| Gene Name |
GLYMA_04G000200 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.50e-166 |
553.9 |
17 |
328 |
|
| Organism |
Glycine max |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94
+kv+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl +++++ kp a+ ++l++fh+++y+ fl++++pe+++++ ++lk+fnvgedcPv
GLYMA13G06010.3 17 RKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPV 110
589******************************************************************************************* PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtv 188
fdgl+++cq+++G+s+ +a kLn++++dia+nwaGGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtv
GLYMA13G06010.3 111 FDGLYSFCQTYAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTV 204
********************************************************************************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
sfhk+g+ +fPgtGd++d+g +kgkyy++nvPl+dgidDesy+ +fk++i kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecvk+++
GLYMA13G06010.3 205 SFHKFGD-YFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMR 297
*******.************************************************************************************** PP
class-1.txt 283 sfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
sfn+pll+lGGGGYt+rnvaRcw+yet+v+l
GLYMA13G06010.3 298 SFNVPLLLLGGGGYTIRNVARCWCYETGVAL 328
****************************986 PP
|
Protein Sequence
(Fasta) | MDTGGNSLPS APDGVKRKVC YFYDPEVGNY YYGQGHPMKP HRIRMTHALL AHYGLLQHMQ 60
VHKPFPARDR DLCRFHADDY VAFLRSITPE TQQDHLRQLK RFNVGEDCPV FDGLYSFCQT 120
YAGGSVGGAV KLNHDQCDIA VNWAGGLHHA KKCEASGFCY VNDIVLAILE LLKQHERVLY 180
VDIDIHHGDG VEEAFYTTDR VMTVSFHKFG DYFPGTGDVR DIGYGKGKYY SLNVPLDDGI 240
DDESYHFLFK PIIGKVMEVF RPGAVVLQCG ADSLSGDRLG CFNLSIRGHA ECVKYMRSFN 300
VPLLLLGGGG YTIRNVARCW CYETGVALGI EVDDKMPQHE YYEYFGPDYT LHVAPSNMEN 360
KNSRHLLEEI RSKLLENLSK LQHAPSVQFQ ERPPDSDLGE ADEDHDDGDE PWDPDSDMDV 420
DVERELVSSK VKKEIAEPQP NDLEDQRSGE HLRDSDTAVA ETCMKALDIS SQKADEDNVK 480
VEQNTVNDLA KETDLKG 497Protein Fasta Sequence
>GLYMA13G06010.3|Class-I|Glycine max
MDTGGNSLPSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRFHADDYVAFLRSITPETQQDHLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGIDDESYHFLFKPIIGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRHLLEEIRSKLLENLSKLQHAPSVQFQERPPDSDLGEADEDHDDGDEPWDPDSDMDVDVERELVSSKVKKEIAEPQPNDLEDQRSGEHLRDSDTAVAETCMKALDISSQKADEDNVKVEQNTVNDLAKETDLKG |
Nucleotide Sequence
(Fasta) | ATTTTAATCC AATTAGAGTT CATAACTTTG TTTTCATGTG TACCAAACAT CCTTACACTT 60
TCCTTTTTAT CCTTAGTATA AGAGAGACTA CTAGTTTAGG ACGAAATTTA TGGTTTACTT 120
CGGAGAATAA TTTTAAAATA TCATCGAACA AGCAGTTAGA GTTGTGAGGC GCTTTTAGCC 180
GGAGTTGCTT CTCTCATCGT CAGTTGTCGT TACGTTGGTC GACCGACTGT GTGCAGCTGA 240
TTTTGCAAAG AGAAGAGGAT AGTTGAATAC TGATAAGAGA AATAACGGGA AACAACAGAC 300
ATGGATACTG GTGGCAATTC TTTACCATCT GCACCTGATG GGGTGAAGAG AAAGGTGTGC 360
TATTTTTATG ATCCGGAGGT TGGGAATTAC TATTATGGGC AAGGTCACCC AATGAAGCCA 420
CATCGCATAC GGATGACACA TGCTCTTCTA GCCCATTATG GATTGCTACA ACACATGCAG 480
GTCCATAAGC CATTTCCTGC TAGAGACAGG GACCTTTGTC GATTTCATGC TGATGATTAT 540
GTTGCATTCC TTCGAAGCAT AACTCCTGAA ACACAGCAGG ATCATCTGAG GCAACTCAAA 600
CGCTTTAATG TTGGTGAAGA TTGTCCTGTT TTTGATGGCC TCTACTCTTT CTGTCAAACA 660
TATGCAGGGG GTTCAGTTGG GGGTGCTGTA AAGTTAAATC ATGACCAATG TGATATTGCT 720
GTCAACTGGG CTGGTGGGTT GCATCATGCC AAGAAGTGTG AGGCTTCTGG ATTTTGCTAT 780
GTTAATGATA TAGTCCTTGC AATCTTAGAA CTTCTCAAAC AACATGAGCG TGTTCTATAT 840
GTGGACATTG ACATCCACCA TGGAGACGGT GTGGAGGAAG CTTTCTACAC TACTGACAGA 900
GTCATGACTG TTTCTTTCCA TAAATTTGGT GACTATTTTC CTGGTACTGG GGATGTACGT 960
GATATTGGAT ATGGAAAAGG AAAATATTAC TCTCTTAATG TTCCACTTGA TGATGGCATT 1020
GATGATGAGA GTTATCATTT TTTGTTCAAA CCAATAATTG GCAAAGTAAT GGAAGTGTTC 1080
AGGCCTGGTG CAGTAGTTCT CCAGTGCGGT GCTGATTCTT TATCTGGAGA CCGATTGGGA 1140
TGTTTCAATC TTTCAATTAG GGGTCATGCT GAGTGTGTCA AATACATGAG ATCATTCAAT 1200
GTGCCCCTCT TGCTACTAGG TGGTGGTGGC TACACCATTC GGAATGTTGC TCGTTGTTGG 1260
TGCTATGAGA CAGGAGTTGC TCTTGGAATA GAAGTTGATG ACAAAATGCC ACAACACGAG 1320
TATTATGAAT ATTTTGGTCC AGATTATACC CTTCATGTTG CCCCAAGTAA CATGGAAAAC 1380
AAGAATTCCC GTCATTTACT TGAAGAAATT CGATCTAAAC TACTTGAGAA TCTTTCCAAG 1440
CTGCAGCATG CTCCTAGTGT CCAATTTCAG GAAAGACCTC CTGATTCTGA TCTTGGAGAG 1500
GCCGATGAAG ATCATGATGA TGGAGATGAG CCTTGGGATC CAGATTCTGA CATGGACGTT 1560
GACGTTGAAC GTGAGCTTGT CTCGAGCAAA GTAAAGAAAG AAATTGCTGA ACCTCAGCCC 1620
AATGATCTGG AGGACCAGAG AAGTGGAGAG CATTTGAGAG ACTCTGATAC TGCAGTTGCG 1680
GAAACCTGCA TGAAGGCTCT AGATATTTCT TCTCAGAAAG CTGATGAAGA TAATGTGAAA 1740
GTAGAACAGA ATACTGTGAA TGATTTGGCC AAAGAGACGG ACCTGAAGGG TTAAGCAACA 1800
TAGGCTTTAA CTGATTGGTG AACAGTTAAA TTGATTTTCC ATTTATGCTG TCGCATTTCC 1860
AAATTAATTG AGATGTGGCT GCTGCTTGGT TCCATCATAG TCCATTGTAT ACACCAGTCG 1920
CATTTTCCTA ATGTTAGGGG CAAGTTTGCA AATTTAAATT GGTTTTTTTT TTATCTCATC 1980
CAGATGGTTT TTTGTACTGT TACATTACAT CTTGTTACAG AATAGTATTA CGTGCTATTA 2040
TTGAGCCGGG TTTATTTTTC TTATACTGAT CTATATTTAT CACTTATCAG TGTATAAAGA 2100
GAACGACTAA CAAATTAAAT
2121Nucleotide Fasta Sequence
>GLYMA13G06010.3|Class-I|Glycine max
ATTTTAATCCAATTAGAGTTCATAACTTTGTTTTCATGTGTACCAAACATCCTTACACTTTCCTTTTTATCCTTAGTATAAGAGAGACTACTAGTTTAGGACGAAATTTATGGTTTACTTCGGAGAATAATTTTAAAATATCATCGAACAAGCAGTTAGAGTTGTGAGGCGCTTTTAGCCGGAGTTGCTTCTCTCATCGTCAGTTGTCGTTACGTTGGTCGACCGACTGTGTGCAGCTGATTTTGCAAAGAGAAGAGGATAGTTGAATACTGATAAGAGAAATAACGGGAAACAACAGACATGGATACTGGTGGCAATTCTTTACCATCTGCACCTGATGGGGTGAAGAGAAAGGTGTGCTATTTTTATGATCCGGAGGTTGGGAATTACTATTATGGGCAAGGTCACCCAATGAAGCCACATCGCATACGGATGACACATGCTCTTCTAGCCCATTATGGATTGCTACAACACATGCAGGTCCATAAGCCATTTCCTGCTAGAGACAGGGACCTTTGTCGATTTCATGCTGATGATTATGTTGCATTCCTTCGAAGCATAACTCCTGAAACACAGCAGGATCATCTGAGGCAACTCAAACGCTTTAATGTTGGTGAAGATTGTCCTGTTTTTGATGGCCTCTACTCTTTCTGTCAAACATATGCAGGGGGTTCAGTTGGGGGTGCTGTAAAGTTAAATCATGACCAATGTGATATTGCTGTCAACTGGGCTGGTGGGTTGCATCATGCCAAGAAGTGTGAGGCTTCTGGATTTTGCTATGTTAATGATATAGTCCTTGCAATCTTAGAACTTCTCAAACAACATGAGCGTGTTCTATATGTGGACATTGACATCCACCATGGAGACGGTGTGGAGGAAGCTTTCTACACTACTGACAGAGTCATGACTGTTTCTTTCCATAAATTTGGTGACTATTTTCCTGGTACTGGGGATGTACGTGATATTGGATATGGAAAAGGAAAATATTACTCTCTTAATGTTCCACTTGATGATGGCATTGATGATGAGAGTTATCATTTTTTGTTCAAACCAATAATTGGCAAAGTAATGGAAGTGTTCAGGCCTGGTGCAGTAGTTCTCCAGTGCGGTGCTGATTCTTTATCTGGAGACCGATTGGGATGTTTCAATCTTTCAATTAGGGGTCATGCTGAGTGTGTCAAATACATGAGATCATTCAATGTGCCCCTCTTGCTACTAGGTGGTGGTGGCTACACCATTCGGAATGTTGCTCGTTGTTGGTGCTATGAGACAGGAGTTGCTCTTGGAATAGAAGTTGATGACAAAATGCCACAACACGAGTATTATGAATATTTTGGTCCAGATTATACCCTTCATGTTGCCCCAAGTAACATGGAAAACAAGAATTCCCGTCATTTACTTGAAGAAATTCGATCTAAACTACTTGAGAATCTTTCCAAGCTGCAGCATGCTCCTAGTGTCCAATTTCAGGAAAGACCTCCTGATTCTGATCTTGGAGAGGCCGATGAAGATCATGATGATGGAGATGAGCCTTGGGATCCAGATTCTGACATGGACGTTGACGTTGAACGTGAGCTTGTCTCGAGCAAAGTAAAGAAAGAAATTGCTGAACCTCAGCCCAATGATCTGGAGGACCAGAGAAGTGGAGAGCATTTGAGAGACTCTGATACTGCAGTTGCGGAAACCTGCATGAAGGCTCTAGATATTTCTTCTCAGAAAGCTGATGAAGATAATGTGAAAGTAGAACAGAATACTGTGAATGATTTGGCCAAAGAGACGGACCTGAAGGGTTAAGCAACATAGGCTTTAACTGATTGGTGAACAGTTAAATTGATTTTCCATTTATGCTGTCGCATTTCCAAATTAATTGAGATGTGGCTGCTGCTTGGTTCCATCATAGTCCATTGTATACACCAGTCGCATTTTCCTAATGTTAGGGGCAAGTTTGCAAATTTAAATTGGTTTTTTTTTTATCTCATCCAGATGGTTTTTTGTACTGTTACATTACATCTTGTTACAGAATAGTATTACGTGCTATTATTGAGCCGGGTTTATTTTTCTTATACTGATCTATATTTATCACTTATCAGTGTATAAAGAGAACGACTAACAAATTAAAT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
