| Tag |
Content |
| WERAM ID |
WERAM-Glm-0150 |
| Ensembl Protein ID |
GLYMA12G31380.1 |
| Gene Name |
GLYMA_12G188200 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.40e-35 |
125.2 |
49 |
335 |
|
| Organism |
Glycine max |
| Domain Profile |
HDAC Class-I
class-1.txt 19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGaslea 112
khp r++ + +++ +s ++ + a+ el +fh+ eyi+ l +v++e ++l + + g ++ + l +G++l+a
GLYMA12G31380.1 49 KHPENSDRVKNLVSILKRGPISPYISWHLGTPAKIPELFSFHTPEYINELVEVDKEGGKQLC---------GGTFLNPGSWDAALLAAGTTLSA 133
67777777777777777777777777777888888999999999999999999888887766.........34456678899999********* PP
class-1.txt 113 akkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlail.ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef...fPgt 201
+k+L +++ +++ hha+ s a G+c++n+ la++ l k+v idid+h+G+g e fy +++v+t+s+h + ++ P +
GLYMA12G31380.1 134 MKHLLNGDGKVSYALvRPPGHHAQPSLADGYCFLNNAGLAVQlALDSGCKKVAVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWgpsHPQS 227
******99999876514456********************972566699********************************8777663336789 PP
class-1.txt 202 GdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae...cvkfv.ksf.nlpllv 290
G++++ g+++g + +n+Pl +g D+ y + f++++ + i+ f P+++vl +G Ds a D+ g l+++g+ e +v+++ k++ ll+
GLYMA12G31380.1 228 GSVDELGEGEGYGFNLNIPLPNGTGDKGYVHAFNELVVPSIQKFGPDMIVLVLGQDSNAFDPNGRQCLTMEGYREigrIVHLLaKRHsAGRLLI 321
***********************************************************************986622166655334435579** PP
class-1.txt 291 lGGGGYtlrnvaRc 304
+ GGY ++ a c
GLYMA12G31380.1 322 VQEGGYHVTYSAYC 335
******99988877 PP
|
Protein Sequence
(Fasta) | MADAGAEGAS SSTVGQIDVF WHEGMLKHDT GNGVFDTGMD PGFLEVLEKH PENSDRVKNL 60
VSILKRGPIS PYISWHLGTP AKIPELFSFH TPEYINELVE VDKEGGKQLC GGTFLNPGSW 120
DAALLAAGTT LSAMKHLLNG DGKVSYALVR PPGHHAQPSL ADGYCFLNNA GLAVQLALDS 180
GCKKVAVIDI DVHYGNGTAE GFYRSNKVLT ISLHMNHGSW GPSHPQSGSV DELGEGEGYG 240
FNLNIPLPNG TGDKGYVHAF NELVVPSIQK FGPDMIVLVL GQDSNAFDPN GRQCLTMEGY 300
REIGRIVHLL AKRHSAGRLL IVQEGGYHVT YSAYCLHATL EGILNLPMPL LADPIAFYLD 360
DETFSVQVIE AIKNYQKDKV C 381Protein Fasta Sequence
>GLYMA12G31380.1|Class-I|Glycine max
MADAGAEGASSSTVGQIDVFWHEGMLKHDTGNGVFDTGMDPGFLEVLEKHPENSDRVKNLVSILKRGPISPYISWHLGTPAKIPELFSFHTPEYINELVEVDKEGGKQLCGGTFLNPGSWDAALLAAGTTLSAMKHLLNGDGKVSYALVRPPGHHAQPSLADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQSGSVDELGEGEGYGFNLNIPLPNGTGDKGYVHAFNELVVPSIQKFGPDMIVLVLGQDSNAFDPNGRQCLTMEGYREIGRIVHLLAKRHSAGRLLIVQEGGYHVTYSAYCLHATLEGILNLPMPLLADPIAFYLDDETFSVQVIEAIKNYQKDKVC |
Nucleotide Sequence
(Fasta) | CTACTTAATG AGCACAAAGG AGTTGTGGCT GCTATCAGCA GTGAGAAGTC GCAAGGAGGT 60
GCAGAATGGC TGATGCAGGT GCAGAAGGAG CATCTTCTTC CACGGTAGGC CAAATTGACG 120
TTTTCTGGCA CGAAGGGATG CTGAAGCATG ACACGGGCAA TGGCGTGTTT GACACGGGGA 180
TGGATCCAGG CTTCTTAGAG GTGTTGGAGA AGCACCCTGA AAACTCAGAC AGAGTGAAAA 240
ACCTAGTGTC TATTCTCAAA AGGGGTCCTA TCTCCCCTTA CATTTCTTGG CACCTTGGTA 300
CACCTGCAAA AATCCCTGAG CTTTTTTCTT TTCACACTCC TGAATACATA AATGAACTGG 360
TAGAAGTTGA TAAAGAAGGG GGGAAGCAGC TTTGTGGTGG GACATTTTTG AACCCTGGAT 420
CATGGGATGC TGCACTTCTT GCTGCTGGGA CTACACTATC TGCGATGAAG CATTTACTGA 480
ATGGGGATGG AAAAGTTTCC TATGCATTGG TTAGGCCCCC TGGTCACCAT GCTCAGCCTT 540
CTCTGGCCGA TGGCTACTGT TTCCTTAACA ATGCAGGTCT AGCTGTGCAA TTGGCTTTAG 600
ATTCCGGCTG CAAGAAGGTT GCGGTCATAG ATATTGATGT GCATTATGGA AATGGAACGG 660
CAGAGGGGTT TTATCGATCT AATAAGGTTC TTACCATCTC TCTTCATATG AACCATGGAT 720
CATGGGGTCC ATCTCATCCG CAAAGTGGCT CTGTTGATGA GCTAGGTGAA GGAGAAGGTT 780
ATGGCTTTAA CTTGAACATA CCTCTACCAA ATGGAACTGG GGACAAGGGA TATGTACATG 840
CCTTCAATGA GTTGGTTGTT CCATCCATCC AAAAGTTTGG GCCTGATATG ATAGTTTTGG 900
TTCTTGGACA AGACTCTAAT GCATTTGATC CCAATGGAAG GCAATGCTTA ACAATGGAGG 960
GCTATAGAGA AATAGGGCGA ATTGTCCATC TTCTTGCGAA AAGGCACAGT GCAGGACGCC 1020
TTCTAATTGT CCAGGAAGGT GGATATCATG TCACATATTC TGCATATTGT TTACATGCAA 1080
CACTTGAGGG GATTCTCAAC CTACCAATGC CTCTACTAGC GGATCCTATT GCTTTTTACC 1140
TAGACGACGA GACATTTTCT GTCCAAGTTA TAGAAGCCAT TAAGAATTAT CAAAAAGATA 1200
AAGTGTGCTA GTGGAGAAAC TCACTAGACA CTTCCTTCTG TGCGTGTGAA ATAAATCTTG 1260
ATACTTTTCA AGAAGGGTTA ATATTTATCG TGTAACTATT GAGGGATTTT CAAGGTTATT 1320
TTAAATAAAT TTAATCTTGT CCAGTTGATC TTTTGATTAA GATTTGGTTG TCATTTTCAT 1380
TTAATGTGAA GGTAAGAAAG ATTTGTACGT TACTAAAGAA TTATTTTATA TTTAGTTTTA 1440
TAATAATTAT TATGAAAATC AACGATCTAA C
1472Nucleotide Fasta Sequence
>GLYMA12G31380.1|Class-I|Glycine max
CTACTTAATGAGCACAAAGGAGTTGTGGCTGCTATCAGCAGTGAGAAGTCGCAAGGAGGTGCAGAATGGCTGATGCAGGTGCAGAAGGAGCATCTTCTTCCACGGTAGGCCAAATTGACGTTTTCTGGCACGAAGGGATGCTGAAGCATGACACGGGCAATGGCGTGTTTGACACGGGGATGGATCCAGGCTTCTTAGAGGTGTTGGAGAAGCACCCTGAAAACTCAGACAGAGTGAAAAACCTAGTGTCTATTCTCAAAAGGGGTCCTATCTCCCCTTACATTTCTTGGCACCTTGGTACACCTGCAAAAATCCCTGAGCTTTTTTCTTTTCACACTCCTGAATACATAAATGAACTGGTAGAAGTTGATAAAGAAGGGGGGAAGCAGCTTTGTGGTGGGACATTTTTGAACCCTGGATCATGGGATGCTGCACTTCTTGCTGCTGGGACTACACTATCTGCGATGAAGCATTTACTGAATGGGGATGGAAAAGTTTCCTATGCATTGGTTAGGCCCCCTGGTCACCATGCTCAGCCTTCTCTGGCCGATGGCTACTGTTTCCTTAACAATGCAGGTCTAGCTGTGCAATTGGCTTTAGATTCCGGCTGCAAGAAGGTTGCGGTCATAGATATTGATGTGCATTATGGAAATGGAACGGCAGAGGGGTTTTATCGATCTAATAAGGTTCTTACCATCTCTCTTCATATGAACCATGGATCATGGGGTCCATCTCATCCGCAAAGTGGCTCTGTTGATGAGCTAGGTGAAGGAGAAGGTTATGGCTTTAACTTGAACATACCTCTACCAAATGGAACTGGGGACAAGGGATATGTACATGCCTTCAATGAGTTGGTTGTTCCATCCATCCAAAAGTTTGGGCCTGATATGATAGTTTTGGTTCTTGGACAAGACTCTAATGCATTTGATCCCAATGGAAGGCAATGCTTAACAATGGAGGGCTATAGAGAAATAGGGCGAATTGTCCATCTTCTTGCGAAAAGGCACAGTGCAGGACGCCTTCTAATTGTCCAGGAAGGTGGATATCATGTCACATATTCTGCATATTGTTTACATGCAACACTTGAGGGGATTCTCAACCTACCAATGCCTCTACTAGCGGATCCTATTGCTTTTTACCTAGACGACGAGACATTTTCTGTCCAAGTTATAGAAGCCATTAAGAATTATCAAAAAGATAAAGTGTGCTAGTGGAGAAACTCACTAGACACTTCCTTCTGTGCGTGTGAAATAAATCTTGATACTTTTCAAGAAGGGTTAATATTTATCGTGTAACTATTGAGGGATTTTCAAGGTTATTTTAAATAAATTTAATCTTGTCCAGTTGATCTTTTGATTAAGATTTGGTTGTCATTTTCATTTAATGTGAAGGTAAGAAAGATTTGTACGTTACTAAAGAATTATTTTATATTTAGTTTTATAATAATTATTATGAAAATCAACGATCTAAC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
