WERAM Information

Tag Content
WERAM ID WERAM-Xim-0214
Ensembl Protein ID ENSXMAP00000017502.1
Gene Name hdac5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXMAG00000017412.1 ENSXMAT00000017527.1 ENSXMAP00000017502.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.20e-144 481.5 85 955
HDAC Class-I 1.80e-30 106.6 735 924
Organism Xiphophorus maculatus
Domain Profile
  HDAC Class-II
           class-2.txt  11 lkhqaleenkekhpEkpeRi 30 
                            +++ l  + +++ E+ +++
  ENSXMAP00000017502.1  85 QQQELLAAKRQQELEHKRKL 104
                           11122222222233333333 PP
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
                           +glvyd+ mlkhq++++n + hpE+++R+q+i+srlqe+gll++ e++++rka+++e+q+vHse h+ l++t+ +l++++l++      
  ENSXMAP00000017502.1 614 TGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLSRSERIRGRKASLDEIQSVHSEFHTLLYGTS-PLNRHKLDHkkllgp 701
                           79**********************************************************************9.********99***** PP
           class-2.txt  85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
                                        ++vdsd++++e++s++a+r+avG+v+el++kv++gelkngfavvRPPGHHaeestamGFC+fn+va++akllqqkl
  ENSXMAP00000017502.1 702 isqkmyavlpcggIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 790
                           ***************************************************************************************** PP
           class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
                            v kilivDwD+HhGnGtq++fy+dp+vly+SlHRyd+g+ffp  gsga++evg+g+g+gfnvN+aw+gg+   mgd eyl+afr vv+
  ENSXMAP00000017502.1 791 GVGKILIVDWDIHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP--GSGAPEEVGSGAGVGFNVNIAWTGGVeppMGDVEYLTAFRSVVM 877
                           *******************************************..******************************************** PP
           class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                           pia++F+Pd+vlvsaGfDa+eg  +plgg++v+a+c+++lt+ l++laggr+v++lEGG++l+ai++a+ea+v+aLlg
  ENSXMAP00000017502.1 878 PIAQQFSPDVVLVSAGFDAVEGhqSPLGGYNVSAQCFGKLTQLLMGLAGGRIVMALEGGHDLTAICDASEACVSALLG 955
                           **********************999***************************************************96 PP
  HDAC Class-I
           class-1.txt 105 itGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvs 189
                             G+ +e a k+  +e +   a+      hha  s a Gfc+ n + ++   l++k+   ++l +d d+hhG+g ++afy+   v+ +s
  ENSXMAP00000017502.1 735 AVGSVIELAFKVAAGELKngFAVVRPP-GHHAEESTAMGFCFFNSVAITAKLLQQKLgvGKILIVDWDIHHGNGTQQAFYNDPNVLYIS 822
                           456666666666665544113444333.4*******************998888864227***************************** PP
           class-1.txt 190 fhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag..Drlgefnlsi 271
                           +h+y++ +ffPg+G  ++vg + g  + vn+  + g++    D +y + f+sv+ ++ + f+P++v++  G D++ g   +lg +n+s 
  ENSXMAP00000017502.1 823 LHRYDDgNFFPGSGAPEEVGSGAGVGFNVNIAWTGGVEppmgDVEYLTAFRSVVMPIAQQFSPDVVLVSAGFDAVEGhqSPLGGYNVSA 911
                           ****9746***********************999987555559********************************872257******** PP
           class-1.txt 272 kghaecvkfvksf 284
                           + +++  +++   
  ENSXMAP00000017502.1 912 QCFGKLTQLLMGL 924
                           ****998887665 PP
Protein Sequence
(Fasta)		PGCIPGEGPG GGGGPVDLRT EPRLGSVSSG GAVDTALREQ QLQQELVLLK QQQELQKQLL 60
FAEFQKKHEV LTRQHEVQLQ EHLKQQQELL AAKRQQELEH KRKLEQQRHE EQEKQRLEQQ 120
LLLLRNKEKG KESAIASTEV KLKLQEFLLS KKEPGPGGLN HSFSPKCWGS QHTSLEQSSP 180
PQSNTPGTPP SYKLPPLLGN YEGKDDFPLR KTVSEPNLKV RSRLKQKVAE RRSSPLLRRK 240
DGTVISTFKK RAVEISAFVC VSVPVSSLCN SAPGSGPSSP NSSNTAIANG NTGSVPNIQT 300
ELRSLHQTLG ADGTLSPLSL YTSPSLPNIS LGLPANTHIT PPQKLSTQQE AERQAIQSLR 360
GGGALTGKFL STSSLPAACR FGGAAHDVET PPPGSHSAHS SLLQHVLLLE QARQQTAMLA 420
VPMYNQSPLV TAERGVATGM RPVNKLPRHR PLARTQSAPL PQSPQALQQL VVQQQHQHFL 480
EKHYKMLSKG GDLPRPPPTH PEETEEELTE TNDMQEDEGA APNRCNVKGE STESELDEDE 540
EDDDVIQLRE SEEETGPITE QSSKENSYKL QKFYDGQSLQ HLSVFSSSLP HRALGRAKSS 600
PATAVNPIKH LFTTGLVYDS LMLKHQCVCG NAHIHPEHAG RVQSIWSRLQ ETGLLSRSER 660
IRGRKASLDE IQSVHSEFHT LLYGTSPLNR HKLDHKKLLG PISQKMYAVL PCGGIGVDSD 720
TVWNEMHSSA AVRMAVGSVI ELAFKVAAGE LKNGFAVVRP PGHHAEESTA MGFCFFNSVA 780
ITAKLLQQKL GVGKILIVDW DIHHGNGTQQ AFYNDPNVLY ISLHRYDDGN FFPGSGAPEE 840
VGSGAGVGFN VNIAWTGGVE PPMGDVEYLT AFRSVVMPIA QQFSPDVVLV SAGFDAVEGH 900
QSPLGGYNVS AQCFGKLTQL LMGLAGGRIV MALEGGHDLT AICDASEACV SALLGDLCDS 960
GFQWPQEKPC PKACASLERV IDIQSKHWPC LQSASQTSGP SLLAGSPVAP GQSERDEAET 1020
LSAMASLSVD VDQPGSVPEN RESNRSTEEP MEEEPVL 1057
Nucleotide Sequence
(Fasta)		CCAGGCTGTA TTCCTGGAGA AGGCCCAGGT GGAGGCGGAG GCCCGGTGGA CTTGAGGACA 60
GAGCCCAGGT TGGGCTCTGT GTCTAGTGGG GGAGCAGTGG ATACAGCCCT GAGAGAGCAG 120
CAGCTTCAGC AGGAACTTGT GCTTCTCAAA CAGCAACAGG AACTCCAGAA GCAGCTGCTA 180
TTTGCAGAGT TTCAGAAAAA ACATGAAGTG TTAACAAGGC AGCACGAAGT CCAGCTGCAA 240
GAGCACTTAA AGCAACAACA GGAGCTGCTG GCAGCAAAGC GGCAGCAGGA GTTGGAGCAT 300
AAGAGAAAAC TGGAGCAACA AAGACACGAA GAACAGGAGA AACAGAGACT GGAGCAACAA 360
CTGTTGCTGC TGAGAAACAA AGAGAAAGGG AAAGAGAGTG CCATTGCCAG CACAGAGGTG 420
AAGCTGAAGC TTCAGGAGTT TCTTCTCAGT AAGAAAGAAC CTGGTCCAGG AGGACTCAAC 480
CATTCCTTCT CCCCAAAGTG CTGGGGAAGC CAGCACACGT CTCTAGAGCA AAGCTCCCCC 540
CCTCAGAGTA ACACCCCCGG AACCCCTCCC TCCTACAAAC TCCCCCCTCT TCTCGGAAAC 600
TACGAGGGCA AAGACGACTT CCCACTTCGG AAGACAGTTT CAGAGCCGAA CCTGAAGGTT 660
CGATCTAGAC TCAAGCAGAA AGTGGCAGAG AGGCGCAGCT CTCCATTGTT GCGCAGGAAG 720
GATGGAACTG TCATCAGCAC CTTCAAGAAA AGGGCTGTTG AGATATCAGC TTTTGTCTGT 780
GTTTCTGTCC CAGTCTCCTC CCTTTGTAAC AGTGCTCCAG GCTCAGGTCC CAGCAGCCCC 840
AACAGTTCCA ATACGGCCAT CGCCAACGGA AACACGGGAT CAGTCCCCAA CATACAAACC 900
GAGCTGAGAT CTCTCCATCA GACACTGGGG GCTGATGGGA CATTGAGTCC TCTTAGCCTC 960
TACACCTCAC CCTCCCTGCC CAATATCTCC CTAGGCCTCC CTGCCAATAC ACACATCACA 1020
CCACCCCAGA AACTGTCCAC CCAGCAGGAA GCAGAGCGTC AGGCCATCCA GTCCCTACGA 1080
GGGGGAGGAG CTCTAACTGG GAAGTTTCTC TCCACTTCCT CCCTACCAGC AGCCTGTAGA 1140
TTTGGAGGTG CGGCACATGA TGTGGAGACT CCGCCCCCCG GTTCTCATTC AGCCCATTCC 1200
TCGTTGTTGC AGCACGTCCT GTTGCTTGAG CAGGCCCGAC AACAGACCGC TATGTTAGCA 1260
GTGCCCATGT ACAATCAGTC ACCGCTGGTT ACTGCAGAGA GAGGTGTAGC CACTGGAATG 1320
CGGCCTGTCA ACAAGCTGCC CCGCCATCGA CCGTTGGCTC GCACACAGAG CGCTCCTTTA 1380
CCCCAGTCGC CCCAGGCGCT GCAGCAGCTG GTGGTCCAAC AGCAGCACCA GCACTTCCTG 1440
GAGAAACACT ACAAGATGCT ATCGAAGGGG GGAGACCTCC CTAGACCACC ACCAACTCAC 1500
CCTGAGGAGA CAGAGGAGGA GCTAACAGAG ACCAATGACA TGCAGGAGGA TGAAGGCGCG 1560
GCTCCTAACA GGTGCAATGT CAAAGGCGAG AGCACGGAGA GTGAGCTAGA TGAAGATGAA 1620
GAGGATGATG ATGTCATTCA GCTAAGGGAG AGCGAGGAAG AGACAGGCCC AATTACAGAG 1680
CAATCGTCTA AGGAAAACAG TTACAAGCTG CAAAAGTTTT ACGATGGTCA GTCCTTGCAG 1740
CATCTGAGCG TGTTTTCATC CTCGCTGCCC CACAGAGCTC TGGGAAGAGC CAAGTCATCC 1800
CCTGCAACTG CTGTCAACCC CATCAAACAC CTCTTCACCA CCGGGTTGGT GTATGACAGC 1860
CTGATGCTGA AGCATCAATG TGTGTGTGGC AATGCTCACA TTCACCCAGA GCATGCTGGG 1920
AGAGTCCAAA GCATCTGGTC CAGACTGCAG GAAACAGGCT TACTGAGCCG CTCTGAGAGG 1980
ATTCGTGGGA GAAAAGCATC TCTAGACGAA ATCCAGTCGG TCCATTCAGA GTTCCACACC 2040
CTGCTGTATG GAACCAGCCC GCTCAATCGG CACAAACTGG ACCACAAGAA GCTTCTGGGT 2100
CCTATCAGTC AGAAGATGTA TGCTGTTCTG CCCTGTGGAG GAATAGGGGT GGACAGTGAC 2160
ACTGTGTGGA ACGAAATGCA CTCATCAGCA GCAGTTCGCA TGGCAGTGGG CTCAGTTATT 2220
GAGCTGGCCT TTAAGGTGGC TGCAGGGGAG CTGAAGAACG GCTTTGCAGT TGTGCGTCCA 2280
CCTGGTCACC ATGCAGAGGA ATCCACAGCC ATGGGCTTTT GCTTCTTCAA CTCAGTAGCC 2340
ATCACTGCCA AACTGCTGCA ACAAAAGCTA GGAGTAGGGA AGATCCTCAT TGTGGACTGG 2400
GACATTCACC ATGGCAACGG CACCCAGCAG GCCTTCTACA ACGATCCCAA TGTGCTCTAC 2460
ATATCTCTGC ATCGGTACGA TGATGGAAAC TTCTTTCCTG GCAGTGGAGC ACCAGAGGAG 2520
GTGGGCTCAG GTGCAGGAGT TGGCTTTAAT GTAAATATAG CATGGACTGG AGGAGTAGAG 2580
CCTCCTATGG GTGATGTGGA ATACCTCACT GCTTTCAGGA GTGTGGTAAT GCCCATTGCC 2640
CAGCAGTTCA GTCCAGATGT GGTCCTGGTG TCTGCAGGCT TTGATGCAGT GGAAGGTCAT 2700
CAGTCTCCTC TGGGTGGCTA CAATGTTTCT GCACAATGTT TTGGTAAGCT AACACAGCTG 2760
CTGATGGGAC TGGCAGGTGG GCGGATTGTA ATGGCGCTAG AGGGTGGCCA TGACCTAACT 2820
GCTATCTGTG ACGCATCAGA GGCCTGCGTC TCTGCCCTCC TGGGAGATCT GTGTGACTCT 2880
GGGTTTCAGT GGCCTCAGGA GAAGCCATGT CCAAAAGCCT GTGCCTCCCT GGAGAGAGTC 2940
ATAGACATCC AGAGTAAGCA CTGGCCTTGT CTCCAGAGTG CGTCTCAAAC CAGTGGCCCC 3000
TCTCTCCTGG CAGGGTCCCC TGTGGCCCCA GGCCAGTCTG AGAGGGACGA GGCTGAAACA 3060
CTCAGTGCCA TGGCCTCTCT AAGTGTTGAT GTGGACCAGC CAGGCTCTGT TCCTGAAAAC 3120
AGAGAATCTA ACAGGTCTAC AGAGGAGCCA ATGGAGGAAG AGCCTGTTTT ATAA 3175
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 92 0.0 1573
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 88 0.0 1468
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 85 0.0 1374
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 84 0.0 1363
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 84 0.0 1346
WERAM-Orla-0184 ENSORLP00000021264.2 Oryzias latipes 77 0.0 1249
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 76 0.0 1241
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 73 0.0 1173
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 69 0.0 1093
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 69 0.0 1089
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 70 0.0 1088
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 69 0.0 1084
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 68 0.0 1084
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 69 0.0 1083
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 69 0.0 1082
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 69 0.0 1081
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 69 0.0 1080
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 69 0.0 1079
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 69 0.0 1078
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 69 0.0 1072
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 69 0.0 1072
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 68 0.0 1072
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 69 0.0 1071
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 69 0.0 1070
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 69 0.0 1070
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 69 0.0 1069
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 69 0.0 1065
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 68 0.0 1063
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 70 0.0 1055
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 67 0.0 1053
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 66 0.0 1050
WERAM-Cap-0214 ENSCPOP00000014276.1 Cavia porcellus 68 0.0 1033
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 67 0.0 1029
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 64 0.0 1011
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 69 0.0 1008
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 65 0.0 1006
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 66 0.0 994
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 65 0.0 984
WERAM-Sah-0166 ENSSHAP00000017733.1 Sarcophilus harrisii 72 0.0 954
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 67 0.0 869
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 56 0.0 862
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 55 0.0 861
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 67 0.0 855
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 57 0.0 850
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 57 0.0 848
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 56 0.0 839
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 55 0.0 839
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 55 0.0 822
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 53 0.0 813
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 54 0.0 813
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 52 0.0 796
WERAM-Sus-0129 ENSSSCP00000018401.2 Sus scrofa 68 0.0 756
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 51 0.0 712
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 52 0.0 706
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 72 0.0 694
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 0.0 651
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 69 0.0 648
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 63 2e-169 594
WERAM-Gam-0006 ENSGMOP00000000768.1 Gadus morhua 66 2e-162 571
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 67 5e-158 556
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 52 7e-150 529
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 56 2e-142 504
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 64 5e-127 453
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 49 1e-120 432
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 49 2e-119 428
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 50 7e-113 406
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 52 1e-81 302
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 40 5e-81 300
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 40 7e-81 300
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 42 2e-78 291
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 42 3e-78 291
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 42 4e-78 290
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 42 4e-78 290
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 42 4e-78 290
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 42 4e-78 290
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 42 9e-78 289
WERAM-Sei-0109 Si029091m Setaria italica 42 3e-77 288
Created Date 25-Jun-2016