WERAM Information

Tag Content
WERAM ID WERAM-Tub-0143
Ensembl Protein ID ENSTBEP00000015305.1
Gene Name HDAC1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTBEG00000017595.1 ENSTBET00000017599.1 ENSTBEP00000015305.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.50e-150 500.6 9 319
Organism Tupaia belangeri
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           +kv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kasaee++k+hs++yi+fl++++p+n++e+sk++++fnvg
  ENSTBEP00000015305.1   9 RKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTKYHSDDYIKFLRSIRPDNMSEHSKQMQRFNVG 97 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql+tG+s+++a kLnk+++dia+nwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
  ENSTBEP00000015305.1  98 EDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+                               v skv+e+f+P+avvlqcG+Dsl+gDrlg+f
  ENSTBEP00000015305.1 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSKVMEMFQPSAVVLQCGSDSLSGDRLGCF 274
                           *****************.***************99999999999999999999************************************ PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nl+ik ha+cv+fvksfnlp+l+lGGGGYt+rnvaRcwtyetav+l
  ENSTBEP00000015305.1 275 NLTIK-HAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVAL 319
                           ****8.9************************************987 PP
Protein Sequence
(Fasta)		MAQTQGTRRK VCYYYDGDVG NYYYGQGHPM KPHRIRMTHN LLLNYGLYRK MEIYRPHKAS 60
AEEMTKYHSD DYIKFLRSIR PDNMSEHSKQ MQRFNVGEDC PVFDGLFEFC QLSTGGSVAS 120
AVKLNKQQTD IAVNWAGGLH HAKKSEASGF CYVNDIVLAI LELLKYHQRV LYIDIDIHHG 180
DGVEEAFYTT DRVMTVSFHK YGEYFPGTGD LRXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXVTSKVME MFQPSAVVLQ CGSDSLSGDR LGCFNLTIKH AKCVEFVKSF NLPMLMLGGG 300
GYTIRNVARC WTYETAVALD TEIPNELPYN DYFEYFGPDF KLHISPSNMT NQNTNEYLEK 360
IXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXPE AKGVEEEGKL 480
A 481
Nucleotide Sequence
(Fasta)		ATGGCGCAGA CTCAGGGCAC CAGGAGGAAA GTCTGTTACT ACTACGACGG GGATGTTGGA 60
AATTACTATT ATGGACAAGG CCACCCAATG AAGCCTCACC GAATCCGCAT GACTCACAAT 120
TTGCTGCTCA ACTACGGCCT CTACCGTAAG ATGGAAATCT ACCGCCCGCA CAAGGCCAGC 180
GCGGAGGAGA TGACCAAGTA CCACAGCGAC GACTACATCA AGTTCCTGCG CTCCATCCGC 240
CCCGACAACA TGTCCGAGCA CAGCAAGCAG ATGCAGCGCT TCAACGTTGG CGAGGACTGC 300
CCGGTGTTCG ACGGGCTGTT CGAGTTCTGT CAGTTGTCGA CCGGCGGCTC CGTGGCCAGC 360
GCCGTGAAAC TGAATAAGCA GCAGACGGAC ATTGCTGTGA ACTGGGCCGG GGGCCTGCAC 420
CATGCAAAGA AGTCCGAGGC GTCTGGCTTC TGTTACGTCA ACGACATCGT CTTGGCCATC 480
CTGGAGCTGC TAAAGTACCA CCAGAGGGTG CTGTACATCG ACATCGACAT CCACCACGGC 540
GATGGCGTGG AGGAGGCCTT CTATACCACA GACCGGGTCA TGACCGTGTC CTTTCATAAA 600
TACGGAGAGT ACTTCCCAGG AACGGGAGAC CTACGGNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNG TCACATCCAA AGTGATGGAG ATGTTCCAGC CCAGCGCCGT GGTCTTACAG 780
TGTGGCTCAG ACTCCTTGTC TGGAGATCGC TTAGGCTGCT TCAATCTGAC CATCAAACAT 840
GCTAAGTGTG TGGAATTTGT CAAGAGCTTC AACCTGCCTA TGCTGATGCT GGGAGGCGGT 900
GGCTACACCA TCCGTAATGT CGCGCGGTGC TGGACGTACG AGACGGCCGT GGCCCTGGAC 960
ACGGAGATCC CGAATGAGCT TCCTTACAAC GACTACTTCG AGTACTTCGG ACCAGATTTC 1020
AAGCTTCACA TCAGCCCTTC CAACATGACC AACCAGAACA CCAACGAGTA CCTGGAGAAG 1080
ATCAANNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1380
NNNNNNNNNN NNNNNNNNNN NNNNCCCGAA GCCAAAGGGG TCGAGGAGGA GGGCAAGCTG 1440
GCCTGA 1447
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 90 0.0 639
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 90 0.0 638
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 90 0.0 638
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 90 0.0 638
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 90 0.0 638
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 90 0.0 638
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 90 0.0 638
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 90 0.0 638
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 90 0.0 637
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 90 0.0 637
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 90 0.0 637
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 90 0.0 637
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 90 0.0 637
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 90 0.0 637
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 90 0.0 634
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 90 0.0 633
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 90 0.0 633
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 90 0.0 632
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 89 0.0 630
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 89 0.0 630
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 88 5e-180 628
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 88 2e-179 626
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 90 4e-178 621
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 90 7e-178 620
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 89 2e-177 619
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 89 1e-176 616
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 89 1e-176 616
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 89 2e-176 615
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 89 1e-175 613
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 89 3e-175 612
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 86 3e-173 605
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 87 1e-171 600
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 86 6e-170 594
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 86 8e-170 594
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 86 8e-170 594
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 84 1e-169 593
WERAM-Mod-0160 ENSMODP00000021783.2 Monodelphis domestica 87 2e-169 593
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 86 4e-169 591
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 86 1e-168 590
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 86 1e-168 590
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 86 2e-168 589
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 86 3e-168 588
WERAM-Tar-0126 ENSTRUP00000027023.1 Takifugu rubripes 86 3e-168 588
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 86 9e-168 587
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 85 2e-166 582
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 85 4e-166 582
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 85 5e-166 581
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 85 6e-166 581
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 85 8e-165 577
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 85 9e-165 577
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 85 1e-164 577
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 81 3e-164 575
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 79 1e-163 573
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 85 2e-163 572
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 85 9e-163 570
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 89 2e-160 563
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 83 7e-159 557
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 81 1e-156 550
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 88 9e-153 537
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 77 2e-146 516
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 77 4e-145 511
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 65 1e-137 487
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 65 3e-135 479
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 64 4e-135 478
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 64 2e-134 476
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 63 5e-134 475
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 64 8e-134 474
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 64 2e-133 473
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 64 2e-133 473
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 65 3e-133 473
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 64 8e-133 471
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 74 1e-132 471
WERAM-Coi-0024 EAS33504 Coccidioides immitis 63 2e-132 470
WERAM-Prp-0060 EMJ10303 Prunus persica 64 6e-132 468
WERAM-Amt-0072 ERN20455 Amborella trichopoda 63 7e-132 468
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 63 3e-131 466
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 63 3e-131 466
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 63 4e-131 465
WERAM-Met-0068 AES71453 Medicago truncatula 62 5e-131 465
WERAM-Glm-0223 GLYMA17G09320.1 Glycine max 62 1e-130 463
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 62 4e-130 462
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 62 5e-130 461
WERAM-Thc-0029 EOY20838 Theobroma cacao 62 8e-130 461
WERAM-Trv-0003 EHK19072 Trichoderma virens 63 9e-130 461
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 61 2e-129 460
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 61 2e-129 460
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 62 3e-129 459
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 63 4e-129 459
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 61 4e-129 458
WERAM-Ved-0020 EGY15146 Verticillium dahliae 61 5e-129 458
WERAM-Trr-0017 EGR48353 Trichoderma reesei 63 9e-129 457
WERAM-Caa-0018 KGT69072 Candida albicans 61 1e-128 457
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 61 2e-128 456
WERAM-Kop-0004 CAY67954 Komagataella pastoris 61 4e-128 455
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 61 5e-128 455
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 61 8e-128 454
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 64 8e-128 454
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 64 9e-128 454
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 64 1e-127 454
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 64 1e-127 454
WERAM-Sot-0084 PGSC0003DMT400069418 Solanum tuberosum 61 1e-127 454
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 64 1e-127 453
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 61 1e-127 453
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 61 1e-127 453
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 64 2e-127 453
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 61 2e-127 453
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 61 2e-127 453
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 64 2e-127 452
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 61 2e-127 452
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 61 3e-127 452
WERAM-Sei-0026 Si006243m Setaria italica 64 3e-127 452
WERAM-Asg-0034 AAS54885 Ashbya gossypii 61 3e-127 452
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 62 4e-127 452
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 64 6e-127 451
WERAM-Cag-0003 CAG57932 Candida glabrata 61 9e-127 451
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 64 1e-126 451
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 60 2e-126 450
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 64 4e-126 449
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 64 7e-126 448
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 60 1e-125 447
WERAM-Aet-0051 EMT16627 Aegilops tauschii 63 4e-125 445
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 60 5e-125 445
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 63 2e-124 443
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 61 1e-123 441
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 57 2e-123 440
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 57 1e-122 437
WERAM-Crn-0023 AAW44291 Cryptococcus neoformans 60 5e-122 435
Created Date 25-Jun-2016