Tag |
Content |
WERAM ID |
WERAM-Gaa-0072 |
Ensembl Protein ID |
ENSGACP00000009568.1 |
Gene Name |
hdac1 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
7.40e-176 |
584.6 |
10 |
321 |
|
Organism |
Gasterosteus aculeatus |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kas ee++k+hs++yi+fl++++p+n++e+sk++++fnvg ENSGACP00000009568.1 10 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVG 98 589************************************************************************************** PP class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178 edcPvfdglfe+cql++G+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea ENSGACP00000009568.1 99 EDCPVFDGLFEFCQLSGGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187 ***************************************************************************************** PP class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267 fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+if++++ kv+e+++P+avvlqcGaDsl+gDrlg+f ENSGACP00000009568.1 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFRPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 275 *****************.*********************************************************************** PP class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwtyetav+l ENSGACP00000009568.1 276 NLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVAL 321 *******************************************987 PP
|
Protein Sequence (Fasta) | MALTSQGTKK KVCYYYDGDV GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60 SGEEMTKYHS DDYIKFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSGGGSVA 120 GAVKLNKQQT DIAINWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180 GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNYPLR DGIDDESYEA 240 IFRPIMAKVM EMYQPSAVVL QCGADSLSGD RLGCFNLTIK GHAKCVEYMK SFNLPLLMLG 300 GGGYTIRNVA RCWTYETAVA LDTSIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTNDYL 360 EKIKQRLFEN LRMLPHAPGV QMQAIPEDAV QEDSGDEEEE DPNKRISIRA HDKRIACEEE 420 FSDSEDEGEG GRRNAASFKK VKRAKTEVKE EEKVPEEEKM DTSKPKEESK TP 472Protein Fasta Sequence
>ENSGACP00000009568.1|Class-I|Gasterosteus aculeatus MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFRPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVALDTSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACEEEFSDSEDEGEGGRRNAASFKKVKRAKTEVKEEEKVPEEEKMDTSKPKEESKTP
|
Nucleotide Sequence (Fasta) | AAGCCAGCCA CACAAAAAAA AGCGCTAAAA TGGCGCTTAC TTCTCAAGGA ACAAAGAAGA 60 AAGTTTGCTA CTACTACGAC GGTGATGTTG GAAACTATTA CTACGGGCAG GGGCACCCCA 120 TGAAGCCCCA CCGGATCCGC ATGACTCACA ACCTGTTGCT CAACTATGGA CTCTACAGAA 180 AGATGGAGAT ATATCGTCCG CACAAAGCCA GCGGAGAAGA GATGACCAAG TATCACAGCG 240 ACGACTACAT CAAGTTCCTC CGTTCGATTA GACCGGACAA CATGTCGGAG TACAGCAAAC 300 AAATGCAGAG ATTTAACGTG GGAGAGGACT GTCCCGTGTT TGACGGTTTG TTTGAGTTCT 360 GCCAGCTCTC CGGAGGGGGC TCCGTCGCTG GTGCGGTGAA GTTGAACAAG CAGCAGACAG 420 ACATCGCCAT CAACTGGGCC GGAGGCCTGC ACCACGCCAA GAAGTCCGAG GCCTCTGGGT 480 TTTGCTACGT CAACGACATC GTACTCGCTA TTCTGGAGTT ACTGAAGTAC CACCAGAGAG 540 TTCTGTATAT AGATATTGAC ATCCATCACG GCGACGGTGT GGAGGAGGCC TTCTACACCA 600 CAGACCGTGT CATGACTGTG TCCTTCCACA AGTACGGGGA GTACTTCCCT GGCACCGGTG 660 ACCTGAGGGA TATCGGAGCC GGTAAGGGTA AATATTACGC TGTGAATTAC CCGCTGAGGG 720 ATGGCATCGA CGACGAGTCG TATGAAGCCA TCTTTAGACC TATCATGGCC AAGGTGATGG 780 AGATGTACCA ACCCAGCGCC GTGGTTCTGC AGTGTGGAGC CGATTCTCTG TCAGGGGACC 840 GGCTCGGTTG CTTTAACCTC ACCATCAAAG GCCATGCCAA GTGTGTGGAG TACATGAAGA 900 GTTTCAACCT GCCACTGCTG ATGCTGGGTG GAGGAGGCTA CACCATCCGT AATGTGGCAC 960 GCTGCTGGAC ATATGAGACT GCAGTGGCCC TCGACACCTC CATCCCCAAC GAGCTCCCAT 1020 ACAACGACTA CTTCGAGTAC TTCGGACCAG ACTTCAAGCT GCACATCAGC CCCTCCAACA 1080 TGACCAATCA GAACACAAAT GATTATCTGG AGAAGATCAA GCAGCGCTTG TTTGAGAACT 1140 TGCGGATGTT GCCACACGCC CCCGGGGTCC AAATGCAGGC CATCCCCGAG GACGCCGTGC 1200 AGGAGGACAG CGGTGACGAG GAGGAGGAGG ACCCCAACAA ACGCATCTCT ATCCGCGCTC 1260 ACGACAAAAG GATAGCGTGT GAGGAGGAGT TCTCTGACTC GGAGGATGAA GGCGAAGGAG 1320 GCCGCAGGAA CGCAGCCAGC TTCAAGAAAG TCAAACGAGC CAAAACAGAA GTAAAAGAAG 1380 AAGAGAAGGT GCCGGAGGAG GAGAAAATGG ACACTTCAAA GCCAAAAGAG GAGTCCAAGA 1440 CACCGTGAGG TCCTCAGCAG CCAATGACGC CATGGCAACT GATCGGGACA CATCTTAAAG 1500 CAAGATTGTT TTGAATCCTT CTCTCTGGGC TGCTGCTGTT GAAGTCAGTG AAGAACTGTA 1560 TCTTTGTAAT GAGACCCCCA CCCCCCCCCC CCCAAATGGG ATGGGGATCC AGATGTTTTC 1620 TAGGACACCT TTTCAACTGT ACCGGTTTTA TGGACTGAGG TTCAACGGAG TATTGTTGTT 1680 TTTTGTATGC TTTCTCGTTT TTTTATTATT AATCTTTTTG CTTATCCCCC GTGACGTAAC 1740 TCTGTAAAAA TGGCTTAGCA CACGTATGCT TTTATATATC TGATGGATTT AACTTATTTA 1800 AATCATAGAT ATTTTGGCTA CTTTGTTTTG TCTTTATGAC TTGTCATGTC TTTAAAAATG 1860 CAGTTGAAGC ATGTTAATGC AATAGATCCT TTTCTGTAAT ACATTTGTGT CACTGGTTTT 1920 GTCTGCTAAA GTCACCGAGT GGTCAAGAGG GTCGAGTGTA CCTGAACACC TTTTTAACAA 1980 GGCACAATAA ACTTGAAATT ACAGTTTTAT ATTTTAGGTT GTAATTTACT ATGTGTCCTT 2040 TAAACATTTG ACAGCTTTGT CTTTTTGGGA TTCCTGCCGC AAAATACAGT TTGGATCCCA 2100 TAATTGCTGC CGTCAGAGCT AATTTGGACT TAAATATCCA GAGTGTATTA ATCTAAAATG 2160 GGAGACAAAT GCCAGAATGC ATTTGTTGTG TATATATTTG TATTCTCAAA AGTGTTGTTT 2220 AAATCTGACA GATCCCAGTG TGCGT
2246Nucleotide Fasta Sequence
>ENSGACP00000009568.1|Class-I|Gasterosteus aculeatus AAGCCAGCCACACAAAAAAAAGCGCTAAAATGGCGCTTACTTCTCAAGGAACAAAGAAGAAAGTTTGCTACTACTACGACGGTGATGTTGGAAACTATTACTACGGGCAGGGGCACCCCATGAAGCCCCACCGGATCCGCATGACTCACAACCTGTTGCTCAACTATGGACTCTACAGAAAGATGGAGATATATCGTCCGCACAAAGCCAGCGGAGAAGAGATGACCAAGTATCACAGCGACGACTACATCAAGTTCCTCCGTTCGATTAGACCGGACAACATGTCGGAGTACAGCAAACAAATGCAGAGATTTAACGTGGGAGAGGACTGTCCCGTGTTTGACGGTTTGTTTGAGTTCTGCCAGCTCTCCGGAGGGGGCTCCGTCGCTGGTGCGGTGAAGTTGAACAAGCAGCAGACAGACATCGCCATCAACTGGGCCGGAGGCCTGCACCACGCCAAGAAGTCCGAGGCCTCTGGGTTTTGCTACGTCAACGACATCGTACTCGCTATTCTGGAGTTACTGAAGTACCACCAGAGAGTTCTGTATATAGATATTGACATCCATCACGGCGACGGTGTGGAGGAGGCCTTCTACACCACAGACCGTGTCATGACTGTGTCCTTCCACAAGTACGGGGAGTACTTCCCTGGCACCGGTGACCTGAGGGATATCGGAGCCGGTAAGGGTAAATATTACGCTGTGAATTACCCGCTGAGGGATGGCATCGACGACGAGTCGTATGAAGCCATCTTTAGACCTATCATGGCCAAGGTGATGGAGATGTACCAACCCAGCGCCGTGGTTCTGCAGTGTGGAGCCGATTCTCTGTCAGGGGACCGGCTCGGTTGCTTTAACCTCACCATCAAAGGCCATGCCAAGTGTGTGGAGTACATGAAGAGTTTCAACCTGCCACTGCTGATGCTGGGTGGAGGAGGCTACACCATCCGTAATGTGGCACGCTGCTGGACATATGAGACTGCAGTGGCCCTCGACACCTCCATCCCCAACGAGCTCCCATACAACGACTACTTCGAGTACTTCGGACCAGACTTCAAGCTGCACATCAGCCCCTCCAACATGACCAATCAGAACACAAATGATTATCTGGAGAAGATCAAGCAGCGCTTGTTTGAGAACTTGCGGATGTTGCCACACGCCCCCGGGGTCCAAATGCAGGCCATCCCCGAGGACGCCGTGCAGGAGGACAGCGGTGACGAGGAGGAGGAGGACCCCAACAAACGCATCTCTATCCGCGCTCACGACAAAAGGATAGCGTGTGAGGAGGAGTTCTCTGACTCGGAGGATGAAGGCGAAGGAGGCCGCAGGAACGCAGCCAGCTTCAAGAAAGTCAAACGAGCCAAAACAGAAGTAAAAGAAGAAGAGAAGGTGCCGGAGGAGGAGAAAATGGACACTTCAAAGCCAAAAGAGGAGTCCAAGACACCGTGAGGTCCTCAGCAGCCAATGACGCCATGGCAACTGATCGGGACACATCTTAAAGCAAGATTGTTTTGAATCCTTCTCTCTGGGCTGCTGCTGTTGAAGTCAGTGAAGAACTGTATCTTTGTAATGAGACCCCCACCCCCCCCCCCCCAAATGGGATGGGGATCCAGATGTTTTCTAGGACACCTTTTCAACTGTACCGGTTTTATGGACTGAGGTTCAACGGAGTATTGTTGTTTTTTGTATGCTTTCTCGTTTTTTTATTATTAATCTTTTTGCTTATCCCCCGTGACGTAACTCTGTAAAAATGGCTTAGCACACGTATGCTTTTATATATCTGATGGATTTAACTTATTTAAATCATAGATATTTTGGCTACTTTGTTTTGTCTTTATGACTTGTCATGTCTTTAAAAATGCAGTTGAAGCATGTTAATGCAATAGATCCTTTTCTGTAATACATTTGTGTCACTGGTTTTGTCTGCTAAAGTCACCGAGTGGTCAAGAGGGTCGAGTGTACCTGAACACCTTTTTAACAAGGCACAATAAACTTGAAATTACAGTTTTATATTTTAGGTTGTAATTTACTATGTGTCCTTTAAACATTTGACAGCTTTGTCTTTTTGGGATTCCTGCCGCAAAATACAGTTTGGATCCCATAATTGCTGCCGTCAGAGCTAATTTGGACTTAAATATCCAGAGTGTATTAATCTAAAATGGGAGACAAATGCCAGAATGCATTTGTTGTGTATATATTTGTATTCTCAAAAGTGTTGTTTAAATCTGACAGATCCCAGTGTGCGT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |