WERAM Information

Tag Content
WERAM ID WERAM-Brr-0180
Ensembl Protein ID Bra035858.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra035858 Bra035858.1 Bra035858.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.50e-163 543.2 19 332
Organism Brassica rapa
Domain Profile
  HDAC Class-I
    class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels..kelkkfnvgedcPv 94 
                    ++v+y+y++++g+y+ygq+hpmkp+r++++h+L+++y+l+++lei +p+ a+a+++ +fhs +y++fl++v+pe++ ++s  ++l++fnvgedcPv
  Bra035858.1-P  19 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPNLADASDIGQFHSPDYVDFLRSVSPESMGDHSaaRNLRRFNVGEDCPV 114
                    589*************************************************************************97765589************ PP
    class-1.txt  95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsf 190
                    fdglf++c++++G+s+ aa kLn+++adiainw GGlhhakkseasGfcyvnDivl+ilellk+++rvly+did+hhGDgveeafyttdrvmtvsf
  Bra035858.1-P 115 FDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 210
                    ************************************************************************************************ PP
    class-1.txt 191 hkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnl 286
                    hk+g+ ffPgtG+++d+gaekgkyya+nvPl+dg+dDes++++f+++i+kv+++++PeavvlqcGaDsl+gDrlg+fnls+kgha+c++f++sfn+
  Bra035858.1-P 211 HKFGD-FFPGTGHIRDIGAEKGKYYALNVPLNDGMDDESFRSMFRPLIQKVMDVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNV 305
                    *****.****************************************************************************************** PP
    class-1.txt 287 pllvlGGGGYtlrnvaRcwtyetavvl 313
                    pl+vlGGGGYt+rnvaRcw+yetav++
  Bra035858.1-P 306 PLMVLGGGGYTIRNVARCWCYETAVAV 332
                    ************************986 PP
Protein Sequence
(Fasta)		METDESGVSL PSGPDGRKRR VSYFYEPTIG DYYYGQGHPM KPHRIRMAHS LIVHYNLHRR 60
LEISRPNLAD ASDIGQFHSP DYVDFLRSVS PESMGDHSAA RNLRRFNVGE DCPVFDGLFD 120
FCRASAGGSI GAAVKLNRQD ADIAINWGGG LHHAKKSEAS GFCYVNDIVL GILELLKMFR 180
RVLYVDIDVH HGDGVEEAFY TTDRVMTVSF HKFGDFFPGT GHIRDIGAEK GKYYALNVPL 240
NDGMDDESFR SMFRPLIQKV MDVYQPEAVV LQCGADSLSG DRLGCFNLSV KGHADCLRFL 300
RSFNVPLMVL GGGGYTIRNV ARCWCYETAV AVGVEPDNKL PYNEYFEYFG PDYTLHVDPG 360
PMENLNTPKD MEKIRNTLLE QLSGLIHAPS VQFQHTPPVN RVLDEPEEDL EERPKPRIWS 420
GTANYESDSD DDEKSPPLVG YSGINDPPMD RDSTGEDDME DEPEVNPPSS
Nucleotide Sequence
(Fasta)		ATGGAGACAG ACGAGAGCGG CGTATCATTG CCGTCAGGTC CCGACGGACG CAAGCGTCGA 60
GTCAGCTACT TCTACGAGCC GACGATCGGC GACTACTACT ACGGCCAAGG ACACCCGATG 120
AAGCCTCACC GGATCCGTAT GGCTCACAGC CTCATCGTAC ACTACAACCT CCACCGTCGC 180
CTCGAGATCA GCCGCCCTAA CCTCGCCGAC GCCTCCGACA TCGGCCAGTT CCATTCCCCG 240
GACTACGTCG ATTTCCTCCG CTCCGTCTCG CCGGAGTCCA TGGGCGATCA CTCCGCCGCG 300
CGGAACCTGA GGCGATTCAA CGTCGGCGAG GATTGTCCCG TCTTCGACGG GCTTTTCGAC 360
TTCTGCCGCG CTTCCGCCGG AGGTTCGATT GGCGCTGCGG TTAAGTTGAA CCGGCAGGAT 420
GCGGATATTG CGATTAATTG GGGCGGTGGG CTTCACCATG CGAAGAAGAG TGAAGCCTCT 480
GGGTTTTGCT ATGTGAACGA CATCGTTTTG GGGATTCTCG AGTTGCTTAA GATGTTTAGG 540
CGAGTTCTCT ACGTTGATAT CGATGTGCAC CATGGAGATG GAGTAGAAGA AGCGTTTTAC 600
ACCACCGACA GAGTTATGAC AGTTTCTTTT CACAAGTTCG GAGACTTTTT CCCAGGAACT 660
GGTCACATCA GAGACATTGG CGCTGAGAAA GGGAAATACT ACGCTCTAAA TGTTCCATTA 720
AACGATGGTA TGGACGATGA GAGTTTCCGC AGCATGTTTA GACCTCTTAT CCAGAAGGTT 780
ATGGATGTGT ATCAGCCAGA GGCAGTCGTT CTTCAGTGCG GGGCTGACTC GTTAAGCGGT 840
GATCGTTTGG GTTGCTTTAA CTTATCAGTC AAGGGTCATG CTGATTGCCT CCGGTTCTTG 900
AGATCTTTCA ACGTTCCTCT CATGGTCTTG GGTGGTGGAG GGTATACTAT ACGAAATGTT 960
GCCCGTTGCT GGTGTTATGA GACTGCAGTT GCGGTTGGAG TAGAGCCGGA CAATAAGCTC 1020
CCGTACAATG AGTACTTTGA GTATTTCGGT CCAGACTATA CGCTTCACGT CGATCCAGGC 1080
CCAATGGAGA ATTTGAACAC ACCAAAAGAT ATGGAGAAGA TAAGGAACAC ATTGCTAGAG 1140
CAACTTTCGG GACTAATACA CGCACCTAGC GTGCAGTTTC AGCACACACC TCCAGTGAAT 1200
AGAGTTTTGG ATGAGCCGGA AGAAGACTTG GAGGAAAGAC CAAAGCCTCG GATTTGGAGT 1260
GGAACTGCGA ATTATGAATC AGACAGTGAC GATGATGAGA AATCACCACC CCTTGTTGGT 1320
TACTCGGGTA TTAATGACCC ACCTATGGAC AGGGACTCTA CTGGTGAAGA TGATATGGAA 1380
GATGAGCCTG AAGTGAATCC ACCATCCTCT TAA 1414
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 100 0.0 918
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 93 0.0 861
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 92 0.0 853
WERAM-Thc-0029 EOY20838 Theobroma cacao 84 0.0 723
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 83 0.0 714
WERAM-Prp-0060 EMJ10303 Prunus persica 83 0.0 714
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 77 0.0 709
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 82 0.0 707
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 77 0.0 702
WERAM-Met-0068 AES71453 Medicago truncatula 80 0.0 690
WERAM-Amt-0082 ERN02510 Amborella trichopoda 81 0.0 683
WERAM-Sot-0084 PGSC0003DMT400069418 Solanum tuberosum 85 0.0 671
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 72 0.0 636
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 72 0.0 635
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 72 0.0 635
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 72 0.0 634
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 71 0.0 634
WERAM-Sei-0051 Si013709m Setaria italica 72 0.0 632
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 71 1e-180 630
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 71 1e-180 630
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 71 1e-180 630
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 71 1e-180 630
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 71 1e-180 630
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 71 1e-180 630
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 71 2e-180 629
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 71 2e-180 629
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 71 4e-178 621
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 72 8e-172 600
WERAM-Aet-0051 EMT16627 Aegilops tauschii 71 2e-165 579
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 67 2e-164 576
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 67 2e-164 575
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 67 3e-164 575
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 71 4e-164 575
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 66 5e-164 575
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 66 5e-164 575
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 66 5e-164 574
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 66 6e-164 574
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 66 8e-164 573
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 66 8e-164 573
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 66 1e-163 573
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 66 1e-163 573
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 66 1e-163 573
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 66 1e-163 573
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 66 1e-163 573
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 66 1e-163 573
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 66 1e-163 573
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 67 2e-163 573
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 66 3e-163 572
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 66 9e-163 570
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 66 2e-162 569
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 66 4e-162 568
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 66 5e-162 568
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 68 2e-161 566
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 66 1e-160 563
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 3e-160 562
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 67 5e-160 561
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 67 6e-160 561
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 76 6e-160 561
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 65 8e-160 560
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 67 1e-159 560
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 67 1e-159 560
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 67 2e-159 559
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 66 3e-159 558
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 66 5e-159 558
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 67 4e-158 555
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 67 5e-158 554
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 67 6e-158 554
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 67 6e-158 554
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 67 6e-158 554
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 68 1e-157 553
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 66 1e-157 553
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 67 2e-157 553
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 67 6e-157 551
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 67 1e-156 550
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 67 1e-156 550
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 66 1e-156 550
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 66 2e-156 549
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 67 3e-156 549
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 66 4e-156 548
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 66 7e-156 547
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 66 1e-155 547
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 66 2e-155 546
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 68 1e-154 543
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 68 2e-154 543
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 68 2e-154 542
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 63 2e-153 540
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 63 6e-152 534
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 62 1e-151 533
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 67 7e-151 531
WERAM-Ved-0020 EGY15146 Verticillium dahliae 61 2e-150 530
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 60 4e-150 528
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 62 2e-149 526
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 70 1e-148 523
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 4e-148 521
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 5e-148 521
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 64 6e-148 521
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 68 1e-147 520
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 63 1e-147 520
WERAM-Trv-0003 EHK19072 Trichoderma virens 63 2e-147 519
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 68 3e-147 519
WERAM-Coi-0024 EAS33504 Coccidioides immitis 61 4e-147 518
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 61 3e-146 515
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 61 4e-146 515
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 61 6e-146 514
WERAM-Trr-0017 EGR48353 Trichoderma reesei 63 7e-146 514
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 59 8e-146 514
WERAM-Kop-0004 CAY67954 Komagataella pastoris 61 1e-145 513
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 61 1e-145 513
WERAM-Cag-0003 CAG57932 Candida glabrata 61 2e-145 512
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 60 3e-144 509
WERAM-Caa-0018 KGT69072 Candida albicans 60 1e-143 507
WERAM-Asg-0034 AAS54885 Ashbya gossypii 59 7e-143 504
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 67 1e-142 503
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 61 4e-142 502
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 60 1e-141 500
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 59 3e-141 499
Created Date 25-Jun-2016